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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                         ===========
                          <---------ZAT14                  --------->YAB1                <------ZmHOX2a(1)
       ---------->DOF2    --------->ZAT14                 <---------YAB1               --------->LBD16
 <---------YAB1          --------->AtLEC2             --------->ARR11(3)              <-----------RAV1(2)
-------->YAB1   <---------HSFB2a(2)                  --------->YAB1                   <---------LBD16
---------ICU4   ------>ZmHOX2a(1)              ----------->GT1          <---------AHL20(2)   -------
-----ZmHOX2a(2) --------->HSFB2a(2)            <---------ZAT6      <---------YAB1 <-----------GT1 <-
 
gatcatgactcaaagtttcctagaatcaatgcagagaaacctatacagaagtgtaaacatattgatagttcttaatgaattgaatttacccaggagaatt  8513500
    <---------CCA1(2)      --------->At4g35610                  --------->ANAC58
   ------>MYB46(1)         <---------At4g35610                  --------->ANAC46    <------ZmHOX2a(1)
   ------>MYB83  <---------ARR14(2)              ------>ZmHOX2a(1)           --------->ANAC58
 <---------MYB59 --------->ARR14(2)             --------->TOE1(2)            --------->ANAC58
====================HOX2a_HOX2a                 --------->TOE2(2)     --------->AHL20(2)
-->GLK1(2)      <---------CCA1(2)       --------->TOE1(3)       --------->ANAC58---------->DOF2
----------GT1------>ZmHOX2a(2)          --------->TOE2(3)>>>>>>>>>GATA-1   ---------->DOF2
 
ttgacctatctcttgatccatatccatcgaagcagaccaaaaaccctaattcctgcgatagataaacacccaaataaacaaagcaaaggatgaattctaa  8513600
                                                                                    <----------DOF2
                                                                                  ------->TEIL
                         --------->ANAC58                                     <-------TEIL
                         --------->ANAC46                   --------->HSFB2a(2)--------->ANAC58
                         --------->ANAC58                   <---------HSFB2a(2)--------->ANAC58
                 <---------MYB52(2)                        <---------LBD16   --------->ARR14(1)
              <----------ID1      ---------->DOF2    <---------HSFC1(2)      --------->CCA1(2)
           <---------TOE1(3)    --------->AHL20(2)   <---------HSFB2a(1)    <---------ARR14(2)
           <---------TOE2(3)    <---------AHL20(2)   --------->HSFC1(2)     --------->ARR11(1)
       --------->YAB1  ----------->RAV1(1)           --------->HSFB2a(1)    --------->ARR14(2)
 --------->YAB1  --------->MYB46(3)          --------->ATHB12           ---------->DOF2
 
tctataacaatgttaagggaacaaacccacacaaattaaaagttaagttgattagaaatttctccagaatgcagataaagatacgaactttggagagtca  8513700
                      --------->REM1(1)                                    <----------DOF2
                     *TSS   --------->REM1(1)                            ================HOX2a_HOX2a
                 <---------YAB1                                          ------>ZmHOX2a(1)
             ------>ZmHOX2a(2)                                       --------->ARR14(2)
            <------ZmHOX2a(2)                                        --------->ARR11(3)
           <---------ARR11(3)                                        <-----------GT1  <---------GLK1(2)
           --------->ARR11(3)              --------->AHL20(2)        <---------ARR14(2)       ------
           --------->ARR14(2)              <---------AHL20(2) <---------ANAC46    ==================
           <---------ARR14(2)----------->RAV1(1)           <---------MYB52(1)     <------ZmHOX2a(2)
 
agaacagagtagccgatcttatgcttcaactacaacagattacaaatttatcaaactcattcgtttcttatatatcctcttttcgatcagattagtccta  8513800
                                                                                                  --
                                                                                                  --
                                                      <---------YAB1      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                                     *TSS         <---------YAB1                ----
      --------->ALFIN1   <----------DOF2         <---------At4g35610    <-----------GT1         ----
>ZmHOX2a(1)         <-----------GT1              --------->At4g35610   --------->KAN4(2)       -----
=HOX2a_HOX2a--------->MYB52(1)              <---------REM1(2)   <-----------GT1          <<<<<<<<<TBF1
 
caaacagaggtggaataacagttatacccttttagtttgtttttgtttacacagatgaagattgaaattacgattataccgttcaatgtttcttcttcac  8513900
                                                             <---------TGA1a
                                                            ------->TEIL
                                                           <---------ALFIN1
                                                         --------->ANAC58
                                                         --------->ANAC58
                                                        --------->SPL7
                                                        --------->PCF2
                                                       ------>NtERF2
                                                      <---------SPL7
                                                      --------->DEAR3(1)
                                                    <---------At4g35610
                          --------->DEAR3(1)        --------->At4g35610
                         <---------LBD16            --------->LBD16
                        --------->MYB52(1)          <---------LBD16                                <
   ---------->DOF2    <------ZmHOX2a(2)        ------>ZmHOX2a(1)                                   <
---->MYB83----------->HVH21--------->LBD16    <---------ALFIN1                                 -----
---->MYB46(1)         ================================HOX2a_HOX2a                          ------>NtERF2
----->DEAR3(1)       <-----------HVH21   ------->TEIL ----------->HVH21                    ---------
----->DREB2C(2)<----------DOF2   --------->MYB52(2) ------>NtERF2                         --------->ANAC46
---->DEAR3(2) <---------DAG2   <---------MYB52(1) <---------LBD16                        <---------LBD16
 
cgacttgaaagctatgacctttccgatcaccggcgttagttatgagcctcctctccgcggacgcacttgggttacttctcaagaatgcaatctccgcgag  8514000
                                                               <---------MYB52(1)
                                 --------->TOE2(3)        <---------ALFIN1
                                ----------->GT1           --------->AtMYB61
                       --------->ANAC46                  --------->ZAT2
                       --------->ANAC55(2)             --------->AtMYB61
                       --------->ANAC55(1)             --------->DEAR3(1)
                       --------->ANAC58                <---------ALFIN1
              <---------ANAC46--------->GLK1(2)       --------->MYB46(3)
   <---------ANAC58    --------->ANAC58             <---------ALFIN1
   <---------ANAC58  <---------DOF5.7(2)            --------->AtMYB61
---------ANAC58    --------->DOF5.7(2)   --------->TOE1(2)--------->DEAR3(1)
---------ANAC58 <------NtERF2<---------GLK1(2)      --------->ANAC46
---->GLK1(1) <------NtERF2 --------->ANAC58        --------->MYB46(3)<---------HSFB2a(2)
>LBD16    <-----------HVH21--------->ANAC58      <-----------GT1     --------->HSFB2a(2)   ------->TEIL
 
ttccatgcgtttgggtcgcgtcgttcacgcaagaatcgtcaaaaccctcgattcaccaccacctccgtttctcgcgaactatctcatcaacatgtactca  8514100
          --------->LBD16                                <---------CCA1(2)
         --------->HSFB2a(2)                         ----------------------->TaNAC69(2)
         <---------HSFB2a(2)                       --------->HSFC1(2)
         --------->ANAC46                          <---------HSFC1(2)
        <---------LBD16                        --------->ANAC58
       ------>MYB46(1)                         --------->ANAC46                   --------->ARR14(2)
       ------>MYB83  <---------ALFIN1      ------>ZmHOX2a(1)                    --------->LBD16 <---
     --------->AtMYB61                   ----------->RAV1(2)<---------ANAC46  <---------LBD16  -----
    --------->MYB46(3)           ------>NtERF2 --------->ANAC58     <---------ZAT14         --------
 
aaactcgaccatccggaatcagcccgactcgttctccgactcactcctgcacgaaacgtcgtctcttggacttcacttatctccggacttgctcagaacg  8514200
                                                                                               -----
                                                                                            <-------
                <-------GAMYB                --------->ALFIN1     <---------DAG2            <-------
      <---------ALFIN1      --------->HSFB2a(2)                   <----------DOF2      <-----------RAV1(1)
--------HVH21  <---------MYB46(3) ----------->HVH21           <---------ZAT14 <----------DOF2<------
------>GT1    <---------AtMYB61   <----------ID1            <---------bZIP60(1)        --------->ALFIN1
->MYB52(1)  <----------DOF2 <---------HSFB2a(2)             --------->bZIP60(1)   ---------->DOF2
 
gtcatttctccaccgctttggttgaattcttcgagatgcgacgagaaggtgttgttccaaatgacttcactttcccttgtgcttttaaagctgtggcttc  8514300
                                                                                   <----------DOF2
                                                                                  <---------ANAC58
                                                                           <---------REM1(1)
                                                                           --------->ALFIN1
                                                                         <---------ANAC58
                                                                         <---------ANAC46
                                                      --------->ARR14(2) <------MYB46(1)
                                                      <---------ARR14(2) <---------ANAC58
                                                     <------ZmHOX2a(1)   <------MYB83
             <---------ANAC46                       <------MYB46(1)     --------->MYB55(2)
   --------->WRKY38(1)                              <------MYB83        <---------MYB46(3)
   --------->ARR14(2)                          --------->ALFIN1      <-------GAMYB<---------ANAC58
   <---------ARR14(2)                          <---------AtMYB61    <---------MYB46(3)
   --------->WRKY12     --------->ARR14(2)   --------->ALFIN1       --------->MYB55(2)
<---------ANAC46    <---------At4g35610  <---------ZAT14            --------->MYB111(2)
------------------>TaNAC69(2)            --------->ZAT14 --------->ANAC55(2)<---------ZAT14
--ANAC58  <---------MYB52(1)      <----------DOF2 <--------P        --------->MYB52(2)
--ANAC58 <-----------HVH21<-------TEIL  ----------->HVH21<---------ANAC55(2)--------->ZAT14<--------
----DOF2--------->ANAC46<---------ARR14(2) <---------ANAC46         <-----------RAV1(1)    ---------
 
tctgcgtttacccgttactgggaagcagattcatgcgcttgctgtgaagtgtggtaggatacttgatgtgtttgttgggtgtagtgcttttgatatgtat  8514400
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AGI:  At4g14840.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71183.1)
Range:  from: 8511482    to: 8513722    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g14850.1   
Description:  LOI1 (LOVASTATIN INSENSITIVE 1). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G09950.1); similar to hypothetical protein OsJ_033061 [Oryza sativa (japonica cultivar-group)] (GB:EAZ18852.1); similar to PPR986-12, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94388.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71181.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 8513854    to: 8516355    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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