Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------AHL20(2)                                                                        <---------ATHB51                                                                        --------->AHL20(2)                                                                       --------->AHL20(2)      <-----                                                               <---------ANAC58                ------                            <---------ARR11(3)          <---------TOE2(3)                     -------                ------->GAMYB        <----------DOF2    <---------TOE1(3)         <---------AHL20(2)        <---------ANAC58    <---------AHL20(1)         <-----------GT1 <---------AHL20(1) <---------AHL20(2)        <---------ANAC58    --------->ARR11(3)<-----------GT1  <---------ANAC58  --------->AHL20(2)   tttgtgtttagcgttcaacccaaatatcgatatattcttctttttttttcacatttttaacgatttcgagcaaaataattcgatttatttgtataatttt  8417900                                              <---------ANAC58                                              <---------ANAC46                                              <---------ANAC55(1)                                              <---------ANAC55(2)                                              <---------ANAC58                                              --------->ANAC55(2)                                              <------MYB46(1)                                             --------->MYB52(2)                                             --------->MYB111(1)                                             --------->MYB46(2)                                             --------->MYB111(2)                                             --------->MYB59                                           <---------MYB52(1)                           <---------KAN4(2)<---------MYB55(1)        <---------ARR11(3)                       <XXXXXXXXXXXXXXXXXXXXMIR837-5P                 --------->ARR11(3)    <--------P   <---------ICU4            <<<<<<<<<MYB98            --------->RVE1(1) <---------YAB1  --------->YAB1      --------->ATHB12    --------->YAB1 ----AHL20(2)   --------->ICU4    ------>MYB83<------MYB83     ----------->GT1 --->AHL20(2)   <---------ATHB12  ------>MYB46(1)       --------->AHL20(2) -->YAB1        <---------ATHB51 --------->MYB52(1)  <---------YAB1  --------->CCA1(1)             <-   aatatggtagttttacaaataatgaaacgaatgaccaactgatttgttaggtgttacaataaatatggaaaaaatctcataagtttgaaaacatttattc  8418000                                                ------------------------>ANAC81                                         ----------->GT1                              --------->DAG2    <----------ID1                                    <--      <---------DAG2         ---------->DOF2    ----------->GT1                              <-------      <----------DOF2----------->GT1    ----------->GT1   ----------->GT1               <----------DOF2 <------ZmHOX2a(1) ---------->DOF2  ---------->DOF2    ---------->DOF2                <-------------- --------TOE2(3)--------->LBD16----------->GT1---------->DOF2    ---------->DOF2     <-----------GT1   tgaggaaactttttcttccccaaaagaaaaaaaaagtttaaagtggaaaaaagaaaaaaaaggaataaaaagtttgaattcagtttttttcttttctttg  8418100                                      --------->ANAC58                                      --------->ANAC58                                    --------->AtMYB61                                   --------->ANAC58                                 --------->ANAC58                                 --------->ANAC58                               <---------ALFIN1                  --------->YAB1                              <---------ZAT14                    <---------ICU4                              --------->ZAT14                   <---------ATHB12                            --------->ANAC46                    <---------YAB1                       --------->ZAT6 --------->ANAC46     <---------ANAC55(2)                  <---------ICU4 --------->ANAC46 --------->YAB1--------->ICU4  <---------GLK1(1)  <-----------GT1----------->RAV1(1)    --------->ANAC55(2)                  ----- -------WOX13(1)  <---------AHL20(2)<---------ALFIN1 <---------AHL20(2)                 ----------->GT1 ---DOF2         <---------AHL20(2)--------->ANAC46  --------->AHL20(2)               ---------->DOF2 ----------ANAC81--------->AHL20(2)--------->ANAC58  --------->AHL20(1)       ---------->DOF2   <----   atagatttctttctacttatttattactctactacacaccacacaaaaacaaaaataaaataagtaatcatagtatcccataaatcagtaaagataaata  8418200                                                                                -------->P                                                                                ------>MYB83                                                                                ------>MYB46(1)        <---------ARR14(2)                                                    --------->AtMYB61   ----------->GT1                        ----------->TBP             --------->ANAC46   --------->LBD16                  ------>MYB46(1)                 --------->REM1(1)  <---------HSFB2a(2)          --------->REM1(1)               <---------ZAT6 *TSS  --------->HSFB2a(2)--------->YAB1 ------>MYB83            ------>ZmHOX2a(1)--------->MYB46(3) ---->AHL20(2)      <---------YAB1--------->MYB46(3) --------->ARR11(3)--------->TOE2(3) -----AHL20(2)      <---------ATHB12-------->P     ----------->GT1  <---------ALFIN1  <---------At4g35610   aaatccagaaaatactgggcctatcattttccttcaccaactctataaatgaagagataatcctacagttacacctcaaaccaactccatctcacttctc  8418300                                                                             <---------ANAC46                                                           --------->YAB1   <------NtERF2              <---------ICU4                            ------>MYB46(1)    ------>NtERF2            <          <---------AHL20(2)                  <---------HSFB2a(2)         --------->DEAR3(1)        -         --------->AHL20(2)                   --------->HSFB2a(2)         <---------DEAR3(1)       --         <---------AHL20(2)                <----------DOF2<-----------------AGL1                  ---         --------->AHL20(1)         ------>ZmHOX2a(2)   ------>MYB83      <---------ANAC46      -----         <---------AHL20(1)       --------->ARR11(3)  --------->TOE2(3) ------->GAMYB --------->AtLEC2     <---------YAB1<-----------GT1<---------ARR11(3)  <---------MYB59--------->MYB52(1)        <-----   aagtcttataatttattcatttctctcttcttcatcgatcttcggcttttagaaaacctaatcagaaatggcaacggcgtcgtttaacatgcagtcagtg  8418400                                --------->REM1(1)                                    --------->At4g35610                              ----------->RAV1(1)                                    <---------At4g35610        ------>ZmHOX2a(1)  --------->ANAC58                                      <-----------HVH21   <---------At4g35610     --------->ANAC55(1)                                 <------ZmHOX2a(1)   <---------ZAT2          --------->ANAC46                                   <------MYB46(1) ---------At4g35610     <---------REM1(2)                                     <------MYB83 -------->At4g35610     --------->ZAT14           -------->P                <--------P ------->MYB52(2)       <---------ZAT14           ------>MYB46(1)          <---------MYB52(1)   <---- ------>ZAT18       <-----------GT1               ------>MYB83            --------->LBD16<---------AtLEC2 ---->ZAT14 --------->LBD16--------->ANAC55(2)  --------->AtMYB61       <---------LBD16 <-------TEIL ----ZAT6 <---------LBD16  --------->ANAC58    --------->MYB46(3)<------ZmHOX2a(1) <-----------RAV1(2)   ttcgctgctccttccggtgtattgactacacgcaacatcagaaacacaaaccaactcttcttcaagaggattgctccggtaggagtcagatgcatggctc  8418500                                                                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                        ------>ZmHOX2a(1)                                                                        =============================                                                                       <---------ANAC58           <--                                           --------->ANAC55(2)         <---------ANAC58           ===                                           <---------ANAC55(2)        --------->MYB52(2)         ----                                        <---------MYB52(1)    ----------->HVH21                  <---                            <---------ALFIN1         <----------DOF2<---------MYB52(1)        <------             -------->P  ------>ZmHOX2a(1)--------->MYB52(2)  ------>ZmHOX2a(1)       --------->AHL20(2) -------RAV1(2)--------->TOE2(3)      --------->ANAC46      <---------ICU4            <---------AHL20(2)   aggtatatatacactaacctcatagtccttccacttccctacgttacttatttgacttttaatcctgaccgttccttacattgactatttttttagggcg  8418600              --------->HSFC1(2)              <---------HSFC1(2)              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            <---------ARR14(2)            <---------ARR11(3)            --------->ARR14(2)            --------->ARR14(3)            <---------ARR14(3)            --------->ARR11(3)           <---------HSFB2a(1)           --------->HSFB2a(1)          ----------->ARR10      --------->ANAC58      <---------TOE2(3)                            ----------->RAV1(1)      --------->ANAC58                             --------->AtMYB61   <---------ATHB12                               --------->ANAC46 ===================HOX2a_HOX2a                  ----------->RAV1(1) ------>ZmHOX2a(1)                              --------->ANAC46 ====================HOX2a_HOX2a                <---------ALFIN1                                    < ====HOX2a_HOX2a                             --------->ANAC58               ----------->RAV1(1)     - ----ZmHOX2a(2)             <---------ALFIN1 --------->ANAC46              <---------ALFIN1  <------- ======================HOX2a_HOX2a         <---------ATERF1(1)           ============================ ----->ARR14(2)            ----------->HVH21 --------->ANAC58            ------>ZmHOX2a(1)   <------- ------ARR14(2) ------>ZmHOX2a(1)          <---------ALFIN1           ------>ZmHOX2a(1)--------->ANAC58 ---------------WRI1  <---------ZAT18    ------>NtERF2      ----------->RAV1(1)        --------->ANAC58   atcctatcaaggaagatccttctgtgccctcgacctcgacttcggccactccaccacaaatgccacagtctcctcctccaccagttagcaagcctaaggt  8418700         <---------YAB1       --------->YAB1       -------->HAHB4      <---------ATHB12      --------->ICU4         <-----------GT1  ------>ZmHOX2a(2)    <---------AHL20(1) ---------ARR11(3)     --------->AHL20(1)            <---------ATHB12                               < -------->ARR11(3)--------->ICU4                <---------At4g35610                             ----- --TOE2(3)        <---------YAB1        --------->AHL20(2)                                     <----- ========HOX2a_HOX2a--------->AHL20(2)  <---------AHL20(2)                    <---------------AtSPL8< --TOE1(3) ---------->DOF2   --------->ZAT6    ------->TEIL      <---------YAB1                ------   atgatctaatgatcaaagtcattaatatatatcactagctaaaaaaatgaagctaatgaataattttcttattgtctaggtgagtacgaagtttggagat  8418800  Previous    Next  AGI:  At4g14690.1    Description:  ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2); chlorophyll binding. similar to ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN), chlorophyll binding [Arabidopsis thaliana] (TAIR:AT3G22840.1); similar to ELIP [Brassica rapa subsp. pekinensis] (GB:AAR11456.1); contains domain SSF103511 (SSF103511); contains domain PTHR14154 (PTHR14154); contains domain PTHR14154:SF1 (PTHR14154:SF1) Range:  from: 8418278    to: 8419258    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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