Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------ZAT14                                         --------->ZAT14                              <---------AHL20(2)                              --------->AHL20(2)                          --------->AHL20(2)              <---------AHL20(2)  --------->YAB1                                      <-----------GT1   --------->AHL20(2)     <---------AHL20(2)                                       <---------ICU4 -------->WOX13(1)       --------->AHL20(2)                              <---------YAB1 ---->WOX13(1)--------->AHL20(2)<---------TOE2(3)                     --------->TOE2(2)            -- ->GLK1(2)   --------->AHL20(2)---------->DOF2                        --------->TOE1(2)          <---   atcaattacatttcatttatttcttcatttatttaaagataactacacttattgtatgtataaactgcaaaacatatgatactaatatttactactctag  8320200                             --------->ANAC58                             --------->ANAC46                             --------->ANAC58                           <---------ALFIN1                 <---------STY1(2)                 --------->STY1(2)            <---------ARR11(3)                                   <---------AtMYB61 -------->DOF2------>ZmHOX2a(2)            ----------->RAV1(1)<----------DOF2 ------ZAT6 --------->ARR11(3)     ----------->RAV1(1)   <-----------GT1       <-----------GT1   tgaaagaagaaaatgatctggctagttccccatgccacaacattccaacacaatacatttatctcttttggtcttggggttttacaaattgtatcagagt  8320300                                                       <-----------GT1                                                    <---------ICU4                                                   <---------AHL20(2)                                                   --------->AHL20(1)                                                   <---------AHL20(1)                                               ------>ZmHOX2a(1)                                              --------->TOE2(3)                                          <----------DOF2                                         ------>ZmHOX2a(2)                                         =============HOX2a_HOX2a                                         --------->HSFB2a(1)                                        <------ZmHOX2a(2)                                        ==============HOX2a_HOX2a                                       --------->ARR14(2)                                       <---------ARR14(2)                                       --------->ARR11(3)             --------->TOE1(2)                                       <---------ARR11(3)<-----------GT1            --------->ANAC46                                 ---------->DOF2   --------->AHL20(2)--------->ANAC58     --------->TOE2(3)     --------->GLK1(2)       --------->LBD16  --------------->AGL15  --------->ANAC58   -------->P  <   aaacaagaatatgttttctaaaatagttttccccataaaccgatctttcctaaaatattacaccatgtgaaacccaagacttgtctaggcaacctcagta  8320400                    <---------HSFB2a(2)                    --------->HSFB2a(2)                 --------->ARR11(3)             ---------->DOF2                                  <---------At4g35610            --------->AHL20(2)                         <---------MYB52(1)            <---------AHL20(2)                       --------->ANAC55(2)           <---------YAB1                            <---------ANAC55(2)        <---------AHL20(2)                          <-------TEIL       <----------DOF2        <---------YAB1                         --------->AHL20(2)   <------ZmHOX2a(1) ---------YAB1<---------TOE2(3)--------->YAB1--------->TOE2(3)--------->At4g35610                   <   atatgagtgtataattaaagttctggcagaaaattataagatgaattcattaaatacgttatggagcttaggactttggcataatcggtattcaatccca  8320500                                                    <---------AHL20(2)                                                    --------->YAB1                                                    --------->AHL20(2)                                                 --------->YAB1<---------ZAT14                                               <---------AHL20(2)                                            <---------AHL20(1) --------->ZAT18                                            --------->AHL20(1) <---------ZAT18<---------ANAC58      --------->AHL20(2)           <---------ARR11(3)          --------->ZAT14<---------ANAC58     <---------AHL20(2)            <---------AHL20(1) ---------->DOF2         <---------ANAC46   <---     --------->AHL20(2)         ----------->GT1--------->AHL20(2)         <------------CBF   -------- ---------MYB52(1)    <---------AHL20(2)<---------AHL20(2) <---------------AtSPL8      <---------GLK1(2)   ctgttatttaaaatagactcatataaaaattgtccagtatattttatatattaataaaaagagagtacacacatagtattgcgttcttggattctatata  8320600                                             <----------DOF2                                             <---------DAG2                                          <---------ALFIN1                                   <---------ICU4                                   --------->ATHB12                                   --------->ATHB51                                   -------->HAHB4                                   -------->ATHB1                                  --------->ICU4                                  <---------ATHB51                                  <---------YAB1                                 ----------->GT1      <---------AHL20(2)       --------->AHL20(2)                      <---------GLK1(2)      --------->AHL20(2)       --------->AHL20(1)                   <---------WOX13(1)    ----------->TBP  ----------->GT1     <---------ZAT18          --------->ATHB12 --------GT1 --------->ZAT6    <---------AHL20(2)                <---------YAB1---------->DOF2 --->TBP   --------->YAB1 *TSS--------->AHL20(2)        <------------------------ANAC81  ---------->DOF2   aaccctatataaataatactaacttgtgaaaaattaattattgcccactttctctctctctctctctctgattgattcttgaaaagaaaatcaaagtctc  8320700                                                          <----------DOF2                                                 ------>MYB46(1)                                                 ------>MYB83                                                 -------->P         <---------AHL20(2)        <------          <---------YAB1             <---------At4g35610 <---------DAG2                 ------>ZmHOX2a(1)   <----------DOF2                  ------->TEIL------>ZmHOX2a(1) <----------DOF2--------->MYB46(3)   aatagctttgttttgattctagttccattccacaattgcatctaattctcctaccgtagccttttcttctttatttgtcatcaacaactcctaaaattca  8320800                               <---------AHL20(1)                          --------->ARR11(3)                          <---------ARR11(3)         --------->ARR14(2)                           ---                        ----------->GT1              <---------ARR14(2)                           ---                      ---------->DOF2    ---------->DOF2    <----------DOF2                       ---                   --------->ANAC58    --------->ANAC58    <---------DAG2                         ---                   --------->ANAC58    --------->ANAC58 <-----------GT1 ---------->DOF2      <------- -TEIL     --------->GLK1(1)   --------->AHL20(1)<-------TEIL   <-----------GT1      <---------STY1(1)   tatgaaattagagaaatcgaaacgaaaagataatatttttcaagaaagagctacatatacaccttttgaccttgtaaagttggaaccctagaggcctttc  8320900            --------->At5g28300     --------->YAB1              <----------DOF2    <---------ATHB12         <----------DOF2                   <---------ICU4 ------>ANAC46              ------>ZmHOX2a(2)               --------->WOX13(1) ------>ANAC58            <---------ARR11(3)              --------->WRKY18(1) ------>ANAC58        <---------ANAC58     --------->ARR14(2)  --------->YAB1 ------>AtLEC2        <---------ANAC58     <---------ARR14(2)  <------------ATHB5             <------ ---DOF2   ----------->GT1--------->ARR11(3)--------->GLK1(1) <---------ATHB12        ------->TEIL  <   aagcaaatcatcagggtaacaatttcttgatctttctttttagcgaatttccagtttttggtcaatcatggcaaacccttggtggacgaaccagagtggt  8321000                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                            <---------ARR11(3)                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)       --------->ALFIN1                                                     --------->AGP1   ------>NtERF2                                                            --------->ARR11(3)  <---------ZAT18                                                           <---------ARR14(3) <---------ANAC58             --------->ANAC46         ---------->DOF2      --------->ARR14(3) <---------ANAC58             --------->ANAC58        --------->AtMYB61    --------->GLK1(1) <---------ANAC46             --------->ANAC58    --------->MYB46(3)       <---------GLK1(1) ---MYB46(3)   <---------HSFB2a(1)     --------->AtMYB61                  ----------->ARR10     ----- ---------At4g35610        ------>ZmHOX2a(1) --------->AtMYB61       ---------->DOF2          -------   ttagcgggcatggtggaccattcggtctcctcaggccatcaccaaaaccatcaccaccaaagtcttcttaccaaaggagatcttggaatagccatgaatc  8321100  Previous    Next  AGI:  At4g14465.1    Description:  DNA-binding protein-related. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT3G04570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71333.1); contains InterPro domain Predicted AT-hook DNA-binding (InterPro:IPR014476); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175) Range:  from: 8320626    to: 8322197    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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