Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->MYB52(2)                                                           <---------MYB52(1)                                                          --------->TOE2(3)                                                         --------->ANAC46                                                         --------->ANAC58                                                         --------->ANAC58                       -----                                                        ------->TEIL                          <------                                                      <---------ZAT18                       <--------                                                   <---------ANAC58                        --------->AHL20(1)                                                   ------>ZmHOX2a(2)                      --------->ATHB51                                                 <---------ARR11(3)                       --------->AHL20(2)                                                 <---------ARR14(2)                       <---------ICU4                                                 --------->ARR14(2)                       <---------AHL20(2)       ----------->GT1                           --------->ARR11(3)                      --------->ICU4 <---------AHL20(2)              <---------TOE1(3) <---------ANAC58                   <---------YAB1- --------->AHL20(2)              <---------TOE2(3)<------ZmHOX2a(2)<---------ANAC46   --------->AHL20(2) <---------AHL20(1)         --------->WOX13(1)  <---------GLK1(1) ---------->ID1      <---------AHL20(2)   taaaaaatttcgaaaaaaaactcaaaaattcaattaaggttttttagtggagatcgtgcacgttaattgtcgtttataggctattgttttaattatttta  8230600                                                     <---------YAB1                                                   -------->HAHB4                                                   <--------HAHB4                                                   <---------ICU4         ----------->GT1                           -------->ATHB1      <---------TOE2(1)                            --------->ATHB51  --------->CCA1(2)                                --------->YAB1                          --------->HSFB2a(1) --------->AHL20(1)                   --------->TOE1(2)                                    <---------HSFC1(2) <---------ARR11(3)                   --------->TOE2(2)  <---------------AtSPL8            <---------HSFB2a(1) --------->ARR11(3)        --------->AHL20(2)     --------->ICU4                           --------->HSFC1(2) ---->AHL20(2)             <---------AHL20(2)     <---------YAB1             <---------ANAC46 ---AHL20(2)  --------->ICU4   --------->TOE2(3)  <---------ATHB51  --------->DAG2  ----------------- -YAB1<---------TOE1(1)<---------AHL20(2)   ----------->GT1        ---------->DOF2<---------ANAC46 -- -------->AHL20(2)     --------->AHL20(2)  <---------TOE2(3)    --------->YAB1 --------->ALFIN1    ==   aaatatatacgaggtaattaagagattaattaaacttaaacatatgaggttaattattacaagtactaataaagctgtaatgtggagtttggaattttcg  8230700                                                                             --------->ALFIN1                                                                            <-------PIF4                                                                            ------->PIF4                                                                            ------->PIF5                                                                            ------->MYC4                                                                            ------->MYC3                                                                            <-------MYC3                                                                            <-------MYC4                                                                            <-------PIF5                                                                            ------->MYC2                                                                            <-------MYC2                                                                           <---------O2                                                                           --------->TGA1a                                                                           <---------TGA1a                                                                           --------->O2                                                                           <---------ANAC55(2)                                                                           --------->ANAC55(2)                                                                           <---------ANAC46                                                                          ------------>OsbHLH66                                                                         <------------OsbHLH66                                                                        <------NtERF2                                                                       ------>NtERF2                                           <---------RVE1(1)          --------->ATERF1(2)                                           <---------CCA1(1)          <---------ATERF1(2)            ----------->RAV1(2)           --------->ARR11(3)         <---------ANAC58           --------->ARR14(2)             <---------GLK1(2)      <---------GLK1(1)       --------->ZAT14                ---------->DOF2           --------->ARR14(2)       <---------ZAT18                ===============================================bZIP_DOF       --------->ZAT18              --------->ANAC46            <---------ARR14(2)             <-----       <---------ZAT14              --------->ANAC58<---------ANAC58 <---------ANAC58          ------  ---------->DOF2                   --------->ANAC58<---------ANAC58--------->At4g35610        ------ ---->WRI1 <---------ARR14(2)<-----------GT1       ---------->ID1--------->GLK1(1)             ====== --------->RAV1(1)      <---------GLK1(2) <---------ARR11(3) <---------TOE1(2)                 <----- =======================RAV<-----------HVH21 <---------AHL20(2)<------ZmHOX2a(1)            ---------   acaacaaagtgcacatctggcacagagattgtcacagcacgaaagatttttttgtcgttcttgtaggatttgctggcacgtgtggaatagaaaacacacg  8230800                                                                                                    <                                                                                                    =                                                                                                    -                                                                                                   <-    --------->MYB46(3)                                                                             -- ----TGA1a                                                                                         -- --->TGA1a                  --------->ATHB51                                       --------->ANAC58<- --->O2                     --------->AHL20(2)                                     --------->ANAC46<- ==========================bZIP_DOF                                                --------->ANAC58-- ----O2         <----------DOF2                                     --------->ANAC58               <- >TOE1(2)   <---------DEAR3(2)                                      --------->ANAC58   --------->MYB52(1)   agtgaaaccatcgtcggtctttgtagcccattatttatacttctattgggctggacttaagcccataagtaagcatctctgttacaagaaaacgggaaac  8230900               --------->AHL20(1)              --------->YAB1               --------->AHL20(2)      --------->HSFC1(2)           --------->YAB1                 <---------AHL20(2)       <---------HSFC1(2)         <---------MYB52(1)               --------->AHL20(2)       --------->HSFB2a(1)        --------->At5g28300   <---------HSFB2a(2)                  <---------HSFB2a(1)       ----------->GT1        --------->HSFB2a(2)                 <-----------ARR10     ------->TEIL            ------>ZmHOX2a(2)                    --------->SPL7  ----------->HVH21         <------ZmHOX2a(2)                     ------->TEIL ------>ZmHOX2a(2)         <---------AGP1<---------WOX13(1)    <---------ANAC58 ================================HOX2a_HOX2a                   <---------ANAC58 ------ZmHOX2a(2)          --------->ARR11(3)                 --------------->AtSPL8      ----------- ================================HOX2a_HOX2a                <---------ARR14(2)          ------>MYB46(1) -------->CCA1(2)          --------->ARR14(2)               <---------GLK1(2)           ------>MYB83 ----------ARR10           <---------ARR14(2)         ----------->HVH21               --------->AtMYB61 ------->ARR11(3)          <-----------ARR10        <---------At4g35610               <---------MYB46(2) ------->AGP1 --------->AHL20(2)     <---------MYB52(1)     --------->ARR14(2)        <---------MYB111(1) --------AGP1<---------------AGL15  <-------GAMYB   --------->At4g35610 --------->HSFB2a(2) --------ARR14(2)          --------->GLK1(2)        --------->ZAT2<---------TOE1(2)   <---------MYB59 ------->ARR14(2)          <---------ARR11(3)    <---------At4g35610    <---------HSFB2a(2) --------ARR11(3)         <------ZmHOX2a(1)<---------AHL20(2) <-------TEIL     ------------>CBF------   agatctgaaccgttaataatattagaaaggatctagaccgttgatttatttatctgctgacagattcgtaccttcgcgaatatcaataccaaaccaatag  8231000                                                                                                  <--                                                                                                  <--                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                      --------->HSFC1(2)                                                                                 --------->HSFB2a(2)                                                                                 <---------HSFB2a(2)                                                                                 --------->HSFC1(1)             *TSS                     --------->RAP2.6(3)               --------->YAB1--------->HSFB2a(1)         <---------At4g35610         <---------ARR14(2)             <----------DOF2   <---------HSFB2a(1)        --------->MYB52(2)           --------->ARR14(2)            <---------DAG2<---------HSFC1(1)       --------->SPL7 ------>ZmHOX2a(1)  --------->At4g35610  ---------->DOF2   <---------LBD16   <-- ->CBF<---------MYB52(1)       ------>ZmHOX2a(1)         --------->DAG2 --------->ANAC55(2) <-------- --->YAB1--------->At4g35610------>ZmHOX2a(1)           ---------->DOF2---------->ID1 <---------HSFC1(2)   aaatattcgttcgctgtcttcttcctcttcctcctctcaaatcggctacagccattggaaaagctaaagccttttcgtaatttctggaagtttctgcagt  8231100                                                                                                    <               <---------TOE2(2)                                                                    -     <---------LBD16                                                                                <     <---------At5g28300                                                                            <    <-----------GT1     --------->ALFIN1                                                ---------->DOF2   <---------REM1(2)  <---------ANAC46                                               <---------TOE2(3) ----MYB46(1)  <---------TOE1(2)           <-----------RAV1(2)             <---------ARR14(2)       < ----MYB83  <---------ANAC58       --------->GLK1(2)                       --------->ARR14(2)    <--- -At4g35610 <---------ANAC58    <---------YAB1                             --------->ARR11(1)<------- >ZAT14  --------->ARR14(2)<---------ARR14(2)                   <---------AHL20(2)   --------->ANAC58 >At4g35610 <---------ANAC46<---------GLK1(1)        --------->ARR11(3)    <---------GLK1(2) <------- -------DEAR3(2)     <---------TOE2(3)   <-----------HVH21      --------->AHL20(2)   --------->ANAC58 -ZAT14  <---------ARR14(2)--------->ARR14(2)      <---------YAB1    <-------TEIL <------ZmHOX2a(2)<-   cggttttcacggtttcgtagattgaggtggatttgtgattctgggtcagaagtaagatagtggaatataaattcatggattcggatcaaggaaagctttt  8231200  <-------GAMYB <---------DEAR3(2) ---------DEAR3(1) -------->ETT(1)                                                                             -------- ---------DREB2C(2)                                                                          -------- ---------At1g77200                                                                     --------->CCA1(2) ---------DEAR4(1)                                                              <---------YAB1 ------ --------RAV1(1)                 --------->At4g35610 ------>MYB83--------->ARR14(2)    <----------ARF1 --DAG2                          --------->ZAT2    --------->MYB46(3)         --------->YAB1--------- ---DOF2                         <---------At4g35610 ------>MYB46(1)  <-----------RAV1(2)   --------- --------ORA47(1)             --------->CCA1(2) <-----------GT1  <---------ARR14(2)<---------YAB1   tgtcggtggtatttcatgggaaactgatgaagataagctgagagaacatttcaccaactatggagaggtttctcaggctattgtgatgagagacaagctc  8231300                                       <---------HSFC1(2)                                       <---------HSFB2a(1)                                       --------->HSFB2a(1)                                       ------>ZmHOX2a(2)                                 --------->HSFB2a(2)                                 <---------LBD16                                 <---------HSFB2a(2)                           <---------ARR11(3)   --------->ETT(2)     <-------GAMYB  --------->HSFC1(2)   <---------ETT(2)    --------->MYB52(2)------>ZmHOX2a(1) ->ZAT2               <-------TEIL    <------ZmHOX2a(2)                                             < ->At4g35610       <---------ANAC58  <---------ARR14(2)                                           --- --->ZAT18         <---------ANAC58  --------->ARR14(2)                                          ---- >ANAC58<---------STY1(1)<---------MYB52(1)      --------->HSFB2a(2)             --------->YAB1  <--- >ANAC58--------->STY1(1)--------->DOF5.7(2)     <---------HSFB2a(2)      --------->ANAC46  ---------   acaggtcgacctaggggttttgggttcgttatcttctcggatccttctgttctcgatagggttcttcaagagaaacacagcattgataccagagaggtta  8231400                                                     <---------ANAC46                                                    ---------->ID1                                               <----------DOF2                                               ------>ZmHOX2a(1)                                            ---------->ID1                                           <-----------GT1 ---------YAB1                            <-----------GT1          --------->ATHB12 ------>ATHB51                      <---------TOE1(3)<---------ANAC58                               < ----->ICU4                         <---------TOE2(3)<---------ANAC58<---------WOX13(1)             - ------YAB1                        ---------->DOF2 <-----------GT1<---------YAB1           <---------GLK1(2) -->GT1                        <---------ZAT6  <---------DAG2  --------->ALFIN1 ----------->GT1 <----   ttattgttctcttatagctccatttctctaattgtgttaaagttttatcctttttgcgttttgctgtgttgattgagaacgagagtaaatatagaatttt  8231500  Previous    Next  AGI:  At4g14300.1    Description:  heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative. similar to heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative [Arabidopsis thaliana] (TAIR:AT2G33410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71458.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 8231013    to: 8232987    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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