Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------ARR14(2)                                                           <---------ARR14(2)                                                           <---------ARR11(3)                                           ----------->GT1 --------->ARR11(3)                                         ---------->DOF2   --------->GLK1(2)                                    --------->ANAC58       --------->ARR14(2)                           <-----------GT1--------->DAG2   <-----------ARR10    --------->ANAC58                     --------->YAB1 --------->ANAC46    <---------ANAC58        --------->ANAC58 >TEIL        ---------->DOF2       --------->ANAC58    <---------ANAC58    --------->ALFIN1       --   taaaaattgaagctataaaagaattagaattacaaaacacacaaaaagtaagaaaattgagtatcttaggtgaaaccggtggaagcaaatcagacaaaag  8194900                 ------------------------>ANAC81               --------->ATHB51               --------->ATHB12            --------->ANAC46            <---------ANAC55(2)            --------->ANAC55(2)                                                                 -----            --------->ANAC55(1)                                                                 -----     --------->TOE2(3)        <----------ID1                                            <----------DOF2     <----------DOF2   ------------------------>ANAC81                              <---------CCA1(2)  ------->TEIL<---------YAB1>>>>>>>>>TBF1              ---------->DOF2          <---------ARR11(3) <---------CCA1(2)   ---------->DOF2                  <---------AHL20(2)        --------->ARR11(3) --------------------->TaNAC69(2)        --------->MYB52(1)       --------->YAB1<-----------ARR10 <--   tttgtatctttaacacataattgaaaagaagaagaacaaaaaaaaacggacttgaattaaaggggctatagtagttgtttagtatcttatcttttaccta  8195000                                       --------->ALFIN1                                      <------ZmHOX2a(1)                                <---------At4g35610                                --------->At4g35610                                <------NtERF2                            --------->ANAC58                            --------->ANAC46                                        <---------ZAT18      --------->YAB1     --------->ARR14(2)                                         --------->ZAT18 ->MYB83                <------ZmHOX2a(1)--------->ATERF1(1)                <---------ARR14(2) ->MYB46(1)<---------ANAC46 --------->ANAC58     <---------ZAT6             --------->ARR14(2) -------ANAC46       <-----------RAV1(2) <------ZmHOX2a(1)               <---------ANAC46    --------   gcgagtaatcgtgaagtagagaaacaggagacgcagcgaaggaggaggctagtggaagtagccgataacaaaatggagtattcgagtgcccatatggtct  8195100                                --------->ANAC46                                --------->ANAC58                                <---------ANAC55(2)                                --------->ANAC58                            <---------ANAC58                            <---------ANAC46                       --------->AHL20(2)                         ---------->ID1                            <---------AHL20(2)                       <-----------RAV1(1)                 --------->ANAC46                       <---------MYB46(3)                  --------->ANAC58                    <----------DOF2                        --------->ANAC58    <<<<<<<<<MYB2<---------ARR11(3)                      ----------->RAV1(1)   <-----------GT1  <------MYB83 ------>MYB83 <---------ANAC58      --------->AHL20(2)         <---------WOX13(1)  <------MYB46(1)--------->ARR11(3)           ----------->GT1     --------->AHL20(2) ->ARR11(3)    ------>MYB46(1)  --------->ANAC55(2)   <-----------GT1     <---------YAB1         <---   tgtttggttttcagaccaagctcttttgttgcttacgaaacatgtagatggattaaataccacacaaattaaaattttgatttacgaattgatgaccata  8195200               <------MYB46(1)               ----------->GT1         ------>ZmHOX2a(1)        --------->TOE2(3)        --------------->AGL15        <---------------AGL15       ----------------->AG       <-----------------AGL3       <-----------------AGL1       ----------------->AGL2       <-----------------AGL2       <-----------------AG                                 *TSS                       --------->At4g35610       ----------------->AGL3                    --------->ANAC46                      <---------At4g35610       ----------------->AGL1              <---------At4g35610                <-----------GT1      ---------->ID1                       --------->At4g35610             <------------CBF         <   <----------DOF2      <---------ANAC46  ------->TEIL   <------MYB46(1) --------->ARR11(3)  <------- ------YAB1    <------MYB83            --------->AtLEC2  <------MYB83---------->DOF2   <---------ZAT2   tgattcttttccttatttggttaattgagtagagagagaccatgcatctcaacgtaatttggtttaggggaaaaagaaattgacctctcagctaatatgt  8195300                                     --------->AHL20(2)                                    <---------AHL20(2)                                 --------->AHL20(2)                  --------->ANAC46  --------->AHL20(2) <-----------HVH21        ---------->DOF2       --------->YAB1        <------MYB46(1)                              ----       --------->AtMYB61    --------->AHL20(2)      <------MYB83                                 <---    --------->ANAC46       --------->YAB1 <---------AtMYB61      --------->CCA1(2)              -----   --------->MYB46(3)     --------->AHL20(2)       <---------MYB46(3)     <---------ANAC46    ------- -----------GT1   <----------ID1--------->AHL20(2) <---------AtMYB61  <---------GLK1(1)      <------- --AHL20(1)    --------->TOE1(2)<---------AHL20(2)<--------P    --------->ARR11(1)--------->TOE2(3)<-   ttttgcccaccaaagtaactacgacaaaataaaaataaataattttggtggagttggtgtcaaatagatatgaattctgtgttatcttattcgttataat  8195400                                        --------->TOE2(3)   ------>ZmHOX2a(2)                    <---------DAG2 --------->ARR11(3)                   ------>MYB83 <---------ARR11(3)                   ------>MYB46(1)           --------->ARR14(2) ----->YAB1                          <---------ALFIN1           --------->GLK1(2) ------ICU4                         --------->MYB46(3)  --------->ATERF1(1) ---->ICU4                          ------->GAMYB      ------>NtERF2 -->YAB1                          >>>>>>>>>MYB98    ------->GAMYB            <----------DOF2 --YAB1                       --------->TOE1(3)  --------->MYB52(1)   <------ZmHOX2a(2) --------YAB1             --------->ARR14(2)     <-----------GT1<---------ARR14(2)        --------->ANAC46   catgatcttccttctcgtgattcccaagtataccctaacccaccttatatttaacggagccatccgaatccgatcgaaactttgtggaatacacacattt  8195500                                              <---------ARR11(3)                                      --------->ARR11(3)                                           <-          <---------ANAC58            <---------ARR11(3)        --------->ANAC58                  <--          <---------ANAC46           <---------GLK1(1)          --------->ANAC58              ------>ZmHOX2a(1)          <---------ANAC58           --------->GLK1(1)       <---------ALFIN1             <---------ARR14(2)   --------->MYB46(3)           ----------->GT1    <---------MYB52(1)                     --------->ARR14(2)  >>>>>>>>>>>>>>>>>LFY         --------->ALFIN1  ----------->GT1--------->ANAC46         <---------GLK1(1)   gtacaaccagtggcttgtttattcggtgagagagtggtgatatctcaagttctgttatatgctccaacgcatcaacttctgttcccattgcatttcctcc  8195600                     <---------MYB52(1)                   <------MYB83                   <------MYB46(1)              <------MYB46(1)                                               <-------TEIL              <---------MYB46(3)                                           >>>>>>>>>>>>>>>>>LFY              <---------DEAR3(2)                                         <---------ANAC58              <------MYB83  <---------ARR14(2)                     <------ZmHOX2a(1)             <---------DEAR3(1)       <---------At4g35610        --------->LBD16            <--------P     <---------GLK1(1)                    <-----------RAV1(2)           <-----------HVH21--------->ARR14(2)    ==========================RAV      <---------At4g35610       <---------LBD16     --------->GLK1(1)      ----------->RAV1(1)    <---------ANAC58 ----------ARR10  --------->MYB59 <---------ARR14(2)            <---------LBD16      --------->At4g35610 -------CCA1(2) <---------MYB52(1)--------->ARR14(2)--------->ANAC46    --------->MYB59----------->TGA1   aaatctcttctcgggtcggttcggtttggatatccgattccgcttagtttgcccacataatttagcccaggaattgggtccattgtctgatgacgaagta  8195700                   --------->ZAT18        --------->YAB1                                 ------>ZmHOX2a(1)                   <---------ZAT18       <---------YAB1                        <---------ARR14(2)                   --------->ZAT14     --------->YAB1                          --------->ARR14(2)                   <---------ZAT14     <---------ICU4                         ------>MYB83            --------->ZAT6            <---------ATHB12         --------->AHL20(2)       <---------ALFIN1      --------->GLK1(2)             --------->WOX13(1)         <---------AHL20(2)     ------>ZmHOX2a(1)     <---------GLK1(2)       ---------->DOF2       ----------->GT1            ------>MYB46(1)   tgttttagaatctaaaactagtggacttaaacaaagcccaatcataataagttgtgtaacaaattttaaatataaaaaccaaatactcctcctccttgca  8195800  Previous    Next  AGI:  At4g14210.1    Description:  PDS3 (PHYTOENE DESATURASE). Identical to Phytoene dehydrogenase, chloroplast/chromoplast precursor (PDS) [Arabidopsis Thaliana] (GB:Q07356); similar to ZDS (ZETA-CAROTENE DESATURASE), carotene 7,8-desaturase [Arabidopsis thaliana] (TAIR:AT3G04870.2); similar to ZDS (ZETA-CAROTENE DESATURASE), carotene 7,8-desaturase [Arabidopsis thaliana] (TAIR:AT3G04870.1); similar to Phytoene dehydrogenase, chloroplast/chromoplast precursor (Phytoene desaturase) (GB:P28553); similar to Phytoene dehydrogenase, chloroplast/chromoplast precursor (Phytoene desaturase) (GB:P28554); similar to unnamed protein product [Vitis vinifera] (GB:CAO45530.1); contains In Range:  from: 8190207    to: 8195260    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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