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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                             <-----------GT1
                                                                          --------------->AtSPL8
                              --------->TOE2(3)                          <---------YAB1
                        --------->AHL20(2)                            <---------YAB1       <--------
                        <---------AHL20(2)                         <---------YAB1         <---------AHL20(2)
--------->DOF2      <---------AHL20(2)         <----------DOF2  --------->GLK1(2)<----------DOF2   <
-->ZAT6             --------->AHL20(2)   --------->ZAT6        <---------GLK1(2)<---------DAG2------
 
taaaaagacaatgttttttttttttaatttaaaacttaaatctaactcttctttttgtcaaatatagattcttattattcttaccttttaaaatttatct  8167100
                                               XXXXXXXXXXXXXXXXXXX>MIR157D
                                              XXXXXXXXXXXXXXXXXXXX>MIR157A-C
                                            <---------WRKY18(1)      ---------->DOF2
                                         <---------ICU4           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)
                                        --------->ICU4        --------->ANAC58
                                   <---------ANAC55(2)        --------->ANAC46
                                   --------->ANAC55(2)        --------->ANAC58    --------->CCA1(2)
                                   ----------->GT1  <---------ARR11(3)           <---------ARR11(3)
---GT1<----------DOF2        --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
-----------GT1          <-----------GT1<---------YAB1--------->CCA1(2)           --------->ARR11(3)
--->TOE2(3)    ---------->DOF2--------->AHL20(2)    --------->ARR11(3)       ---------->DOF2
 
tatttccttcttttttttaaaagagatttacaataaataagtaatattgaccaaagatatagaacacaccaaaaaagaggcaaagatatagaaaacatac  8167200
                                     <---------YAB1
                                    --------->KAN4(2)
                            --------->TOE2(3)
                          --------->ARR11(3)
                          <---------ARR11(3)
                         --------->RVE1(1)
                         --------->CCA1(1)
                         <---------CCA1(1)
                         <---------GLK1(1)                                                 ---------
            <---------AHL20(2)     <---------KAN4(1)  --------->AHL20(2)          <----------DOF2
            --------->AHL20(2)     --------->KAN4(1)  <---------AHL20(2)    <---------ARR14(2)     -
    <---------RVE1(1)    --------->GLK1(1)    --------->ARR14(2)            <-----------ARR10      <
   --------->ARR11(3)    <---------RVE1(1)    <---------ARR14(2)            --------->ARR14(2)  <---
   <---------ARR11(3)   --------->ARR11(3)    <-----------ARR10            <---------CCA1(2)    ----
   <---------GLK1(2)    <---------ARR11(3)   <---------CCA1(2)         ------->GAMYB<---------AHL20(2)
 <---------TOE2(3)   <--------P  <---------GLK1(2)  <----------DOF2 <-----------GT1 --------->AHL20(2)
 
tatttagattttttataaattttggtagatatcttagattattctagcaaatctcctttaattgttttttttaacagcaaatctcctttaattacatcaa  8167300
                                                                                        <-------TEIL
    <---------TOE2(3)                                                      --------->TOE1(3)
    <---------TOE1(3)                                       <---------WRKY18(1)        <------ZmHOX2a(2)
  ---------->DOF2                                        <---------ANAC55(2)          <---------ARR11(3)
--------->LBD16                              --------->AHL20(1)            --------->TOE2(3) <------
>TOE2(3)----------->GT1                      <---------AHL20(2)            <---------MYB59  --------
-------->ANAC55(2)                           --------->AHL20(2)          ------->TEIL <---------ARR14(2)
---------ANAC55(2)           <---------GLK1(2)   <-----------GT1  <---------ALFIN1    --------->ARR14(2)
------ARR14(2)       --------->YAB1      --------->AHL20(2)----------->HVH21          --------->AGP1
----->ARR14(2)  --------->AHL20(2)      --------->ICU4   --------->ANAC55(2)    --------->ANAC46
 
atccgtaaaggttgaaaaaaaaaataacaatagaattttagtaatgaattaattaccaatacttgacccaaacccgaacctaaacaccagatccatcgtc  8167400
                                                                                          --------->GLK1(1)
                                                                                          <---------ARR14(2)
                                                                                          --------->ARR14(2)
                                                                               --------->ANAC58
                                                                               <---------ANAC55(2)
                                                                               --------->ANAC55(2)
                                                              ------>ZmHOX2a(1)<---------TGA1a
                                                           ------>ZmHOX2a(1)   --------->ANAC46
                                                     ------>NtERF2             --------->O2
             <------------CBF                        <---------ATERF1(1)       <---------O2
          --------->YAB1                 <---------ATHB12  *TSS                --------->TGA1a
          --------->AHL20(2)        ------>MYB46(1) ----------->HVH21          --------->ANAC58
     ------------>CBF               ------>MYB83   ------>NtERF2             <---------ALFIN1
-----TGA1<---------ATHB12      <-----------GT1     --------->LBD16 --------->ANAC55(1)    <---------GLK1(1)
->YAB1 --------->WOX13(1)     ----------->HVH21   --------->RAP2.6(2)       ----------->HVH21
 
atcatccatccaatcaaattgactcatcgtgttgtgacctcccagtgattaagccgcgactcctcctaactcgtaatccctcacgtctctgagaattctc  8167500
                                           ------>ZmHOX2a(1)
                                       <---------MYB52(1)
                                     <---------ANAC58
                                     <---------ANAC58                           <---------ARR14(2)
                                    ==============HOX2a_HOX2a                   --------->ARR14(2)
                                    ------>ZmHOX2a(2)                          <------NtERF2
                                  --------->ARR14(2)                          --------->LBD16
                                  <---------ARR14(2)                         <---------ANAC58
                                ----------->HVH21                            <---------ANAC46
                               ===================HOX2a_HOX2a                <---------ANAC58
                               ------>ZmHOX2a(2)                            <---------LBD16
                              ====================HOX2a_HOX2a             --------->ALFIN1
                              <------ZmHOX2a(2)                        <---------ARR14(2)
                             --------->ARR14(2)                     <---------ANAC46           <----
          --------->ATHB12   <---------ARR14(2)     ------>ZmHOX2a(2)--------->LBD16        --------
         <-------TEIL      --------->LBD16 ================HOX2a_HOX2a<------NtERF2     ---------->DOF2
         <---------YAB1   <---------HSFB2a(2)   ----------->ARR10  <---------LBD16 --------->DAG2<--
 
agtttcttcagtttcattgcaattcaattcccgatctgatccgttcctgcttagatcggagcaaaacaatggcggagatggcggataaggcgaaagtgga  8167600
                                                                                               <----
                                                          <---------TOE2(3)                  -------
                                         --------->HSFB2a(1)         --------->ANAC46        ------>NtERF2
             --------->ARR11(3)          <---------HSFB2a(1)     --------->ANAC58        --------->ANAC46
   --------->ATHB12               <---------bZIP60(2)     <---------TOE1(3)--------->ALFIN1 --------
-----ANAC46 <------MYB83          <---------ANAC58 --------->ANAC58  --------->ANAC58 ------>ZmHOX2a(1)
->ALFIN1    <------MYB46(1)       <---------ANAC46 --------->ANAC58  --------->ANAC58 ==============
----ZmHOX2a(1)   --------->ICU4   <---------ANAC58<------NtERF2  --------->ANAC58     ==============
 
ggagatggattgggaaggtattgatggagttcgtatgacttggaacctttggcctcgcactaaggttgaagcaagcaagtgtgtgattcctctcgccgct  8167700
                       <---------DAG2
                   --------->ANAC58
                 <---------ALFIN1
               <-----------HVH21
               <-----------TGA1
              <---------bZIP60(1)
         <------ZmHOX2a(2)
        <---------ARR14(2)
        --------->ARR14(2)              <---------MYB52(1)
      --------->DEAR3(1)               <---------DAG2
   <-----------GT1 --------->ANAC58=====================HOX2a_HOX2a
------DOF2    --------->bZIP60(1)  ------>ZmHOX2a(2)
-->At4g35610  --------->O2        <---------GLK1(1)                               --------->ANAC46
->DEAR3(1)------>ZmHOX2a(2)      <---------ARR11(3)                     --------->ARR11(3)
=================HOX2a_HOX2a --------->TOE2(3)       --------->ATHB12   <---------ARR11(3)
================HOX2a_HOX2a<---------YAB1        ------>ZmHOX2a(1)  ---------->DOF2         xxxxxxxx
 
tcaatttcaccgatccgtcgtcacccccttatccttgatctcccttatgctcctctcgattgcaagacttgtaaagctcttctcaacgccttcgctcgtg  8167800
                                              <--------HAHB4
                                              --------->ATHB12
                                              --------->YAB1
                                              <---------ICU4
                                             <---------ATHB12
                                     --------->YAB1
                                    <---------YAB1                      ------>ZmHOX2a(2)
                           ------>ZmHOX2a(1) --------->ICU4    <---------YAB1
       ------>NtERF2       <---------DAG2 <------ZmHOX2a(1)  <-----------GT1                      <-
    <---------RAP2.3(1)    <----------DOF2=====================================HOX2a_HOX2a        <-
xxxxxxxxxx>smallRNA(se3)---------->ID1--------->TOE1(2)  <---------YAB1<---------GLK1(1)        ----
 
ttgatttcgccgctatgaactgggtctgtcctttttgctatcataggaatcatttcccttctcattaccattcgatctctgagattaatctccctggtga  8167900
                                                <---------O2
                                                --------->O2
                                   ------>NtERF2--------->TGA1a                                  <--
                                 <---------ANAC58                                             <-----
                             <-------MYC3       <---------TGA1a                             <-------
                             ------->MYC3       <---------ANAC58                           <-------TEIL
                      <---------ANAC58          <---------ANAC46                        <---------ANAC58
                      <---------ANAC58          <---------ANAC58                        <---------ANAC46
           --------->ZAT6   --------->ANAC46 <---------MYB52(1)----------->RAV1(2)      <---------ANAC55(2)
          <---------ZAT14   <---------O2    <-----------HVH21  --------->ZAT2           --------->ANAC55(2)
          --------->ZAT18--------->ZAT18  ------>ZmHOX2a(2)  --------->DEAR3(1)         <---------ANAC58
          <---------ZAT18<---------ZAT18<---------ARR14(2)   --------->AtMYB61          <---------ANAC55(1)
          --------->ZAT14<---------ZAT14--------->ARR14(2)   <---------ALFIN1          <-------TEIL
     --------->LBD16  <---------ANAC46------>ZmHOX2a(1)     --------->MYB46(3)       --------->ARR14(2)
--------DAG2     <---------ZAT6  <---------ANAC58         --------->ANAC46        <---------HSFB2a(2)
---------DOF2    ===============================RAV       <---------ALFIN1        --------->HSFB2a(2)
----->At4g35610  <-----------RAV1(1)----------->RAV1(2) ------>NtERF2        <---------MYB46(3)-----
 
gctttatccccagtacactactgttgagtacacgttgcctcctgatccgtctcgtgtgcctccaccacctgtgtttgtgtttgttctcgatacgtgcatg  8168000
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AGI:  At4g14160.1   
Description:  transport protein, putative. similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT2G21630.1); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT1G05520.1); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT3G23660.1); similar to At1g05520/T25N20_16 [Oryza sativa (japonica cultivar-group)] (GB:AAX96396.1); similar to hypothetical protein OsI_034747 [Oryza sativa (indica cultivar-group)] (GB:EAY80788.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66988.1); contains InterPro domain Sec23/Sec24 trunk region; (InterPro:IPR006896); contains InterPro domain Zinc finger, Sec23/S
Range:  from: 8167460    to: 8173360    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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