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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                     --------->WOX13(1)
                                             <------ZmHOX2a(1)
                                           --------->TOE1(1)
                      <----------DOF2    --------->TOE2(2)                       --------->ANAC58
              --------->DAG2             --------->TOE1(2)                  ----------->HVH21
        ----------->GT1             <-------TEIL  ------>MYB83----------->GT1    --------->ANAC58
------>GT1   ---------->DOF2 --------->TOE2(3)    ------>MYB46(1)         <----------DOF2
 
gaaacaaggtaatgtaaaaagcagactttagaccttagattcaacctaggacctagcaatcgaagtagtaagaacaactttgacgcgctaaaattcacaa  8134500
                                                                                                 ---
                                                                                                ----
                                                                                              <-----
                                                                                             <------
                                                                                             <------
                                                      --------->ANAC58                       <------
                                                   ------->GAMYB                            --------
                                                  --------->ANAC46                         ---------
     ------->GAMYB                   <----------DOF2  --------->ANAC58                    --------->YAB1
    --------->ANAC46            <---------MYB52(2)--------->ANAC58     ----------->GT1   <---------ATHB12
    --------->ANAC58            <---------MYB59   --------->ANAC58---------->DOF2       ------>MYB83
    --------->ANAC58      --------->DAG2    <-------TEIL       --------->TOE2(3)        ------>MYB46(1)
 <---------WRKY12        ---------->DOF2<---------TOE2(3)    <-------TEIL             --------->MYB46(3)
 
gagttcaacgaaacaatctctaatttcataaaggaactaactttaggttcacaacgcaaacaaatacatcaaagaagaaaataaactcaccaatcgtcaa  8134600
                                      <---------ICU4
                                      --------->YAB1
                                     --------->ICU4
                                     <---------YAB1
                                  <---------ATHB12
---------->DOF2           --------->SPL7
------>TOE2(3)         <---------ANAC58
----->ANAC46           <---------ANAC58                                    --------->AHL20(1)
----DOF5.7(2)          <---------ANAC46 <---------YAB1                     --------->AHL20(2)
---WRKY45              --------->ANAC55(2)--------->ARR11(3)               <---------AHL20(2)
---WRKY12              <---------ANAC55(2)<---------ARR11(3)    -------->P--------->AHL20(2)     <--
---WRKY38(1)       <---------ANAC58<---------ICU4           --------->ANAC58                   -----
->DOF5.7(2)        <---------ANAC58--------->YAB1           --------->ANAC58              ----------
>TOE2(3) <-----------RAV1(2)    --------->WOX13(1)     <---------LBD16--------->YAB1  ----------->GT1
 
cgtaaaagtaacccagaagatggattgcgtaaggccaatcatcatgatattcaattccttcggaagcaacctataaaaaaaattaagaagcgataaatcg  8134700
                              --------->TOE2(3)
                              --------->TOE1(3)                                                   --
                        --------->ANAC46                                                         ---
                     --------->ZAT14                                                             ---
     --------->ANAC46<---------ZAT14                                                             <--
   <-----------GT1 --------->bZIP60(2)                                                          ----
-------TOE1(2)<---------ARR14(2)                 --------->MYB52(1)      ----------->RAV1(2)    <---
---->TOE1(2)  --------->ARR14(2)      ------->TEIL  ------->GAMYB  <-----------GT1              ----
>DOF2--------->ZAT6--------->ANAC46<---------ATHB12--------->MYB46(3)   ------->TEIL            <---
 
aacgattaacaccacaaaatccacttcacaaaaccctaatgaacatcagaaacaacgacagcgagagaaattacgaacctgaagcatgagagtatcgcag  8134800
                                      ======================HOX2a_HOX2a
                                     --------->TOE2(3)
                                     <---------------AGL15
                                     --------->TOE1(3)
                                --------->HSFC1(2)
                                <---------HSFC1(2)
                          ------>NtERF2               <-------TEIL
                          <------NtERF2              --------->CCA1(2)
                         ------>NtERF2------>ZmHOX2a(1)
                         --------->RAP2.6(2)         <------ZmHOX2a(2)
             ---------->DOF2    --------->HSFB2a(1) --------->ARR14(2)                --------->HSFC1(2)
  <---------------------WRI1 ---------->DOF2        <---------ARR14(2)                <---------HSFC1(2)
------->MYB52(1)        <---------ATERF1(2)         --------->AGP1      <---------ZAT14
------>GLK1(1)          <---------RAP2.6(2)         --------->ARR11(3)  --------->ZAT14
------>CCA1(2)          <---------DEAR3(1)          <---------ARR11(3)  <---------ZAT18
-------GLK1(1)          --------->ATERF1(2)       --------->HSFB2a(1)   --------->ZAT18 <----------DOF2
----->ARR11(3)         --------->RAP2.6(3)      ---------->DOF2    <---------YAB1<---------HSFB2a(2)
------ARR11(3)    <---------ARR14(2)<-----------------AGL1  <---------ANAC58     --------->HSFB2a(2)
----->ARR14(2)    --------->ARR14(2)----------------->AGL1  <---------ANAC58 --------->ZAT14     ---
------ARR14(2)   <------ZmHOX2a(1)  ----------------->AG    <---------ANAC46 <---------ZAT14     <--
 
atatcggcgattttgtcaaaggatttggcggccaaagcttccttaacaggcgaaagatccatgacttgtttcgattgcactactctcgaagcttttgcga  8134900
                                    >>>>>>>>>>GT-3b
                                 ----------->GT1
                               ---------->DOF2
                           --------->LBD16
                          --------->LBD16
                         <---------LBD16
                         <-----------RAV1(2)            <-----------GT1
                        <---------ZAT14     --------->GLK1(2)                                     --
                        --------->ZAT14  --------->AHL20(2)                 ------------>CBF      --
                      --------->ANAC58   <---------AHL20(1)             <---------ICU4           ---
                      --------->ANAC46   --------->AHL20(1)           --------->GLK1(2)         ----
              *TSS    --------->ANAC58   <---------AHL20(2)          --------->YAB1            -----
------>At4g35610    --------->AtMYB61   --------->AHL20(2)        --------->YAB1               -----
-------At4g35610   --------->MYB46(3)   <---------AHL20(2)      --------->AHL20(2)          --------
 
agatgacaattctactcccaaaaccactccagggaaaagaaaaataaattctgtgagatttacaggttttaataatcttttcaatacggtttacttaaac  8135000
                                                                     --------->YAB1
         >>>>>>>>>>WRKY43                                           <---------YAB1
         >>>>>>>>>>WRKY26                                        <---------ATHB12
         >>>>>>>>>>WRKY38                                    >>>>>>>>>E2Fd                    >>>>>>
      <------------CBF                                       >>>>>>>>>E2Fc                    >>>>>>
    --------->AHL20(2)                                      --------->LBD16                  ------>NtERF2
    <---------AHL20(2)                                      ------>NtERF2                    -------
--------->AtMYB61                                          <<<<<<<<<<E2Fa --------->ANAC58  <<<<<<<<
---->MYB83  <---------MYB59                                --------->ANAC46           <---------DEAR3(2)
---->MYB46(1)                           --------->ZAT18    --------->ANAC58   ------>NtERF2 --------
------>ORA47(1)                      --------->ANAC58      --------->ANAC58  --------->DEAR3(1)
----->DEAR3(1)         ----------->GT1  <---------ZAT18   <---------LBD16 --------->ANAC58  --------
---->DEAR3(2) ------>MYB46(1)        --------->ANAC58  <-----------GT1   --------->DAG2     --------
---->MYB46(3) ------>MYB83      <----------ID1      --------->MYB52(2)  ---------->DOF2    <--------
-->DOF2  <-----------GT1<------ZmHOX2a(1)        --------->TOE2(3)--------->YAB1      <---------MYB46(3)
 
cgaccaaaaaattgaccaaacacaagaggataaatgggccaagcccactaagccttagtttcccgccaaacatcataaagccacccggtctgttcccgcc  8135100
                                                                                            --------
                                                                                            <-------
                                                                                            ------>ZmHOX2a(1)
                                                                                           ---------
                                                                                          ==========
     --------->MYB52(1)                                                                   ------>ZmHOX2a(2)
   --------->MYB46(3)                                                                    ===========
>>>E2Fc                                                                                  <------ZmHOX2a(2)
>>>E2Fd                                                         <------NtERF2           <---------ARR14(2)
-->LBD16                                                       ------>NtERF2            --------->ARR14(2)
<<E2Fa                                                        <---------ANAC58          <---------ARR11(3)
->ANAC46                     <---------ALFIN1                 <---------ANAC58          --------->AGP1
->ANAC58                   --------->ANAC58                   <---------ANAC46          --------->ARR11(3)
->ANAC58                   --------->ANAC58       --------->At4g35610                   <---------GLK1(2)
-LBD16            *TSS     <---------ALFIN1       <---------At4g35610            <------NtERF2     <
 
aaaataacaaacagtctctctcactctcacacacactctctctctctctctgtagctctctcttggcgcgagttctaccatggccgaatcagatcctata  8135200
 <------ZmHOX2a(1)                                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
------->AGL15                                                 --------->ANAC58
--------AGL15                    <-------GAMYB                --------->ANAC58
-------->AGL3 <----------DOF2   ----------->GT1      --------->TOE1(3)                          <---
========HOX2a_HOX2a             --------->MYB52(2)   --------->TOE2(3)                         <----
========HOX2a_HOX2a           <---------MYB52(1)  <---------GLK1(2)                         ------>ZmHOX2a(1)
---------TOE2(3)    ---------->ID1   <-----------GT1 <---------DAG2  <-----------GT1 <---------ATHB12
 
ttgaggaagaagatgcgattttcgtcttcttcagttcgttatactacctctcagaaccttatggcaagcaaattacgaactcagagcaatcgttcctccg  8135300
                                      <-----------TGA1
                                     --------->ANAC46
                                  ------>ZmHOX2a(2)
                                 <---------GLK1(1)
                                 <---------HSFB2a(1)
                                 --------->HSFB2a(1)
                                 --------->GLK1(1)
                                 <------ZmHOX2a(2)
                                --------->ARR14(2)
                                <-----------ARR10
                                ------->TEIL
                                <---------ARR11(3)
                                <---------ARR14(2)
                                --------->ARR11(3)               ----------->GT1
                               <---------CCA1(2)             ---------->DOF2
                             --------->ANAC55(2)           <------ZmHOX2a(2)
                             --------->ANAC58       ----------->HVH21
                             --------->ANAC58      <-----------HVH21
                             --------->ANAC55(1)   <-----------TGA1
                             <---------ANAC55(2)  <---------ANAC58
------MYB52(1)              <---------LBD16       <---------ANAC58
-----SPL7                <-----------HVH21        --------->ANAC46      ----------->GT1 --------->LBD16
 
ttcgatttgcatccccattgtctcacattgtcacggatcttcgtcaccatcatgcgtcaccgatcaaagggaaaattgttactcaaatgccccgaacttg  8135400
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AGI:  At4g14110.1   
Description:  COP9 (CONSTITUTIVE PHOTOMORPHOGENIC 9). Identical to COP9 signalosome complex subunit 8 (CSN8) [Arabidopsis Thaliana] (GB:P43255;GB:Q8GWZ4); similar to hypothetical protein [Vitis vinifera] (GB:CAN67908.1); contains InterPro domain Signal recognition particle, SRP19 subunit; (InterPro:IPR002778)
Range:  from: 8132881    to: 8134915    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g14120.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23740.1)
Range:  from: 8135119    to: 8136962    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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