Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->ANAC58  --------->ANAC55(2)  <---------ANAC55(2)  --------->ANAC58                                               --------->ARR11(3)  --------->ANAC46                                               <---------ARR11(3)             <----  --------->ANAC55(1)                                    <---------ARR14(2)                 ---------  ----------->GT1           --------->bZIP60(2)          --------->ARR14(2)                ---------- ---------ALFIN1          <---------ALFIN1              <------ZmHOX2a(1)            --------->MYB46(3) -------ALFIN1         <-----------GT1                --------->LBD16          --------->LBD16 ------ --->PCF2       <---------ANAC46          <---------ALFIN1--------->CCA1(2)    <---------At4g35610 -- ->ZAT2    <-----------RAV1(1)   <---------At4g35610 <---------LBD16           --------->At4g35610--- --At4g35610 <---------MYB52(1)  <---------CCA1(2)   <-----------RAV1(2)  <----------DOF2------->GAMYB   ccacacgtaaaaactgttgggggtatcaccacttcatctctcccccaagttttgtccaggatatggagatgttgaactttccgcttaacaacagcgttaa  8081300                                                       --------->TOE2(3)                                                     <---------DOF5.7(2)     --------->At5g28300                       <---------At5g28300    ----------->GT1                           <-----------GT1                        <---------AHL20(2) -------GT1                                   --------->MYB52(1)                    --------->YAB1 >TOE2(3)                                 --------->WOX13(1)                  --------->ANAC58 ->GT1                            <-----------TGA1 --------->DOF5.7(2)   --------->ANAC46 ---->DOF2                        <-----------HVH21<---------MYB52(1)    --------->ANAC58 ------->AtMYB61        --------->At4g35610 <---------ATHB12             --------->ANAC58 --------->TOE1(2) ------>MYB46(3)        <---------At4g35610 <---------MYB52(2)<----------DOF2 --------->ANAC58  <----   accactcggtgaaatgaacagtttcaagctgaacatcgtcataccaattaaccgttaacttaaacttttgtaaacacgactcgctattaaaacctagaaa  8081400                ---------->DOF2             ------>MYB46(1)             ----------->RAV1(1)                                                            <--------             ------>MYB83                --------->YAB1                                     <--------          --------->ANAC58              <---------YAB1                                      ---------          --------->ANAC58            --------->YAB1                                        ---------     --------->ANAC46               ------->TEIL                                           <---------CCA1(2)     --------->ANAC58          <---------At4g35610                              --------->ANAC46     --------->ANAC58     <---------GLK1(1)                      <---------ALFIN1       <-------TEIL -------------------TaNAC69(2) --------->At4g35610            <-----------GT1----------------->AGL1   cctataaacgaaacccaacaaagcgttgaattccgatgaatcataatactccctcaccatgaaatcaccacattccaagtccaaaccaggtacatatctc  8081500                                                                               --------->ANAC58                                                                               --------->ANAC46                           --------->ANAC55(1)                                 --------->ANAC58                        <---------ZAT14                             ----------->GT1                        <---------ZAT18                             --------->YAB1                        --------->ZAT14                             --------->TOE1(3)                        --------->ZAT18                             --------->TOE2(3)                    --------------->AtSPL8                        <---------ARR11(3)                    <---------------AtSPL8                        --------->ARR14(2)                 ----------->HVH21                                <---------ARR14(2)               <---------ANAC58                                   --------->GLK1(2)               <---------ANAC58                           <-------TEIL     --------->ANAC58               <---------ANAC46                  <---------ANAC46<---------ARR14(1)    ----------->GT1 -ARR11(3)    <------NtERF2--------->ANAC46 --------->TOE2(3)    <---------GLK1(2)--------->WOX13(1)- -ARR14(2)  <---------DEAR3(1)        ------->GAMYB   <---------KAN4(2)    --------->ANAC58---------- >ARR11(3) --------->At4g35610       --------->MYB46(3)  --------->CCA1(2)--------->DAG2 <--------P < >ARR14(2) <---------At4g35610     <-----------GT1    ----------->ARR10  ---------->DOF2<---------MYB52(1)   cagacatttctccagcggcgtgatagtacacttaacttaaccacatccttggtgggaagattcaagagaatcttaaaaagcaagcaatctggtaagtttc  8081600                 <---------ANAC55(2)                 --------->ANAC55(2)      --------->GLK1(1)                 <---------At4g35610     <-----------ARR10                 ----------->RAV1(2)    <------NtERF2                 --------->At4g35610  <---------DEAR3(1)     <------ZmHOX2a(2)            ---------->DOF2    <-----------ARR10             --------->MYB52(1)    <---------ARR14(2)           ----------->HVH21                      --------->ANAC58    --------->ARR14(2)   <---------ANAC58--------->ARR14(2)             --------->ANAC58 -------->At4g35610      <---------ANAC58<---------ARR14(2)           --------------------->WRI1 ->ARR10     <-----------HVH21  <---------MYB52(2)               <---------At4g35610 ---------At4g35610----------->HVH21 <---------LBD16             --------->At4g35610             ----   tcagccgatctactctatcacctgatggcttcgcactaacgcggctctccctgtcttcttccatgttatctgcctagcaaacatcgaactgaaatgaaga  8081700                                                         <------ZmHOX2a(2)                                                       --------->At4g35610                                                     --------->YAB1                                                  ------>MYB46(1)                                                  ------>MYB83--------->ANAC46                                                <---------MYB46(2)                                                <---------MYB59                                                <---------MYB111(1)                   ---------->DOF2             ----------------->AGL1      --------->ARR11(3)                  --------------->AtSPL8                     ----------->GT1      <---------ARR11(3)                  <---------------AtSPL8             <------------CBF   <----   --------->AHL20(2)                     <---------------AtSPL3        <------ZmHOX2a(2) <---------CCA1(2) ----->GLK1(2) --------->O2   <---------ICU4  ------->TEIL  --------->MYB52(1)    <---------At4g35610   atcgaataaatcttccaacgtgaaagacatcaaaatgacagaaatatgtacctaatcagatcaaacggagcgagatcgagattgagatgcttaaatctcc  8081800               <---------ARR11(1)               ------->TEIL               <-----------ARR10               <---------ARR14(2)               --------->ARR14(2)              <---------ARR14(1)              <---------CCA1(2)           <------ZmHOX2a(2)              <---------TOE1(3)     <-----------GT1                      <---------TOE2(3)   --------->HSFB2a(1)           --------->ZAT14                          ----------->GT1   --------->HSFC1(2)            <---------ZAT14            <-----------HVH21   <---------HSFC1(2)       --------->ZAT14                <---------At4g35610 ---------->DOF2   <---------HSFB2a(1)      <---------ZAT14         <----------DOF2      --------->DAG2 -----AtLEC2------>ZmHOX2a(2)  --------->ANAC46     <---------DAG2  <---------ZAT6            <------   atggaattttccgatcgtatctactgtgtcttcactccagttttagggtttcaactttttcaggtcagtagtggaaaggtgaaaagtctctaagtgctgt  8081900                    --------->YAB1                   <---------AHL20(2)                <---------AHL20(2)                --------->AHL20(2)               --------->AHL20(2)      <---------ANAC46                                               ----------->GT1      <---------ANAC58                                               --------->ANAC58      <---------ANAC55(2)                         --------->ANAC55(2)--------->ANAC58      <---------ANAC58               <---------AHL20(2)              <---------ANAC55(2) ----DOF2    --------->YAB1          --------->AHL20(2) ------>ZmHOX2a(2)                      <-----   ttcgaactacgtgtataataaataataaacatgttcagtttaatttagttttaagtgatcgatctatagttacgaaaaaaaaaaacacaagtctgggctt  8082000                                                                                                  ---                                                                                                  <--                                             ---------->DOF2                                      ---                                         --------->AHL20(2)                                       <--                                  ------>MYB46(1)                                               <----                   >>>>>>>>>GATA-1--------->MYB52(1)                   <---------AHL20(2)     <------          <---------ZAT18         ------>MYB83--------->DAG2        ------->TEIL        --------->MYB52(1)  --------->ARR11(3)            <---------MYB59             <---------ARR14(2)      --------->TOE1(3)  <---------ARR11(3)            --------->AtMYB61           --------->ARR14(2)      --------->TOE2(3) -----DOF2--------->ZAT18      --------->MYB46(3)   <---------AtMYB61  --------->AHL20(2)    --------   ttaagaacttagcccactatagataaaaatcgaaccaaaccgattaaaaaagttttggtgcaaatcgacgaatttatattcaaaaaccataaacggtgtt  8082100                                                    --------->LBD16                                     --------->ZAT2--------->ANAC58                     ----------->GT1       <---------AHL20(2)   --------->ALFIN1       --------->ANAC46                 <---------SPL7 ------>bZIP60(1)          <-------MYC3 --------->ANAC58                           <---------ANAC58 -------TGA2(1)            ------->MYC3 --------->ANAC58                           <---------ANAC58 ------>REM1(1)     <---------STY1(1)<---------ZAT2--------->ANAC58            <------MYB83 --------- -------bZIP60(1)--------->ZAT6    <------NtERF2--------->ARR14(2)             <---------MYB46(3) -------GT1 --------->YAB1 <-----------HVH21   <---------ALFIN1                <------MYB46(1) -----HVH21 --------->TOE1(3)     <---------LBD16 <---------LBD16             --------->MYB59 ->ALFIN1   --------->TOE2(3)   ------>NtERF2<---------ALFIN1         ------->TEIL<-------TEIL   acatcatattaaaaccataaccctaggcatgtgaggcccggctcgccccaaacccgcaaaatcaactatttgaatctagtttggttcgtcccgttaaaat  8082200  Previous    Next  AGI:  At4g13985.1    Description:  FBD1 (FBD-ASSOCIATED F-BOX PROTEIN). Identical to FBD-associated F-box protein At4g13985 [Arabidopsis Thaliana] (GB:Q4PSI6;GB:O23259); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G69630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 8080113    to: 8081664    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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