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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
TOE2(3)
<<<<<<<<<
GATA-2
<<<<<<<<<
GATA-3
--------->
REM1(1)
<<<<<<<<<
GATA-4
<-------
TEIL
<<<<<<<<<
GATA-1
--------
At4g35610
--------->
WOX13(1)
<---------
ANAC58
------->
At4g35610
<---------
ATHB12
<---------
ANAC58
----->
AGL15
--------->
WOX13(1)
--------->
TOE2(3)
<-------
TEIL
tagctacatttcatcttctcgttgaatcaatcaatccacaatccataaactcatttccataattcagtctataaatcacacagagacctagatgcgttct
8078900
<-----
--------->
At4g35610
<------
MYB83
<---------
ARR14(2)
<----------
DOF2
<------
MYB46(1)
--------->
ARR14(2)
--------->
HSFB2a(2)
--------->
MYB59
--------->
GLK1(2)
<---------
HSFB2a(2)
--------->
YAB1
<---------
GLK1(2)
aacatttccaaaaccccttttacattggaaacttgatcaaaattaggtcaattcaaaacttggaatatagaagagtttggatagaatctgactcac
atag
8079000
<---------
ARR14(2)
--------->
MYB52(1)
<---------
ANAC58
----------->
TGA1
<------
MYB46(1)
--------->
ARR14(2)
----------->
HVH21
<------
MYB83
----------->
GT1
<---------
ZAT2
<------
MYB46(1)
<---------
ANAC58
<---
--------->
ZAT2
--------->
MYB111(1)
----------->
GT1
<------
--------->
At4g35610
--------->
MYB59
<------
NtERF2
<---------
YAB1
------->
TEIL
<---------
At4g35610
--------->
ARR11(3)
<--------
P
<------
ZmHOX2a(1)
--------->
ICU4
---------->
DOF2
----
TOE2(2)
<---------
TOE2(3)
<---------
YAB1
<------
MYB83
<---------
ANAC46
--------->
ATHB12
<--------
gtattgagctgacgaatgaaggaagagaagttattgtgtttgaagtaggttggaagaaggaggcgtgaaaattcggcatgattccaaacgatgaagctgt
8079100
-
<
--
--
<---
<------
ZmHOX2a(2)
----
--------->
ARR11(3)
----
--------->
ARR14(2)
-----
<---------
ARR14(2)
<---------
ETT(2)
-----
--------->
CCA1(2)
--------->
WRKY38(1)
--------->
ARR14(2)
--------->
ARR14(2)
--------->
ETT(2)
<---------
SPL7
<-----
--------->
ANAC46
<---------
MYB52(1)
<------
MYB83
---------->
DOF2
<---------
ATERF1(1)
--------->
ANAC58
<-------
GAMYB
--------->
WRKY12
---------->
DOF2
------>
NtERF2
--
<---------
ZAT18
<---------
MYB46(3)
--------->
AtMYB61
--------->
ANAC58
<---------
LBD16
---
--------->
ZAT18
------>
ZmHOX2a(2)
--------->
DEAR3(1)
--------->
ANAC58
------>
ZmHOX2a(1)
--
------
MYB46(3)
<---------
ARR14(2)
------->
TEIL
<------
MYB46(1)
--------->
DAG2
--------->
LBD16
-
-----
RAV1(1)
--------->
ANAC58
<---------
At4g35610
<---------
TOE2(2)
<------
NtERF2
------>
NtERF2
-
At4g35610
<---------
ALFIN1
--------------------->
WRI1
<---------
TOE1(2)
<---------
DEAR3(1)
------>
ZmHOX2a(1)
tgttgttagcgctccacgatacgatctggtccgttgatgaatcgtcgaccatctcgtaggttttcaccaagaaaggcgctggtcctccggctccttctcc
8079200
<---------
DEAR3(1)
--------->
ALFIN1
<---------
ANAC46
<---------
ATERF1(1)
<---------
DEAR3(1)
------->
GAMYB
<---------
DOF5.7(2)
--------->
MYB52(1)
----------->
HVH21
<---------
MYB52(2)
--------->
DOF5.7(2)
-------->
At4g35610
---------
At4g35610
------->
RAP2.6(2)
------->
RAP2.3(2)
------>
MYB83
---
------
ATERF1(1)
---------->
DOF2
<--
----->
LBD16
------>
MYB46(1)
-----
-->
NtERF2
--------->
ATERF1(1)
<-----
---->
ANAC46
--------->
ATERF1(1)
--------->
DEAR3(1)
<------
---->
DEAR3(1)
<------
ZmHOX2a(1)
<---------
MYB52(1)
<------
----
LBD16
<------
NtERF2
<---------
MYB59
-------
------->
RRTF1(3)
<---------
ANAC55(2)
--------->
GLK1(2)
-------
------>
RAP2.3(1)
--------->
ANAC55(2)
<---------
GLK1(2)
--------
------->
DEAR3(1)
<-----------
GT1
<-------
TEIL
--------->
YAB1
---------->
DOF2
----->
NtERF2
<------
NtERF2
<------
NtERF2
------->
TEIL
--------->
CCA1(2)
<-------
gccgctaacggaggcggaggagttacctaatgcgccgttcat
tgttgaatctaatcagaaactggtacaagagatggtgatgctgggaaagagagagatc
8079300
<---------
AHL20(2)
--------->
AHL20(2)
*
TSS
<---------
RAP2.6(3)
--------->
LBD16
--------->
At5g28300
<---------
ANAC46
----------->
GT1
--->
ZmHOX2a(1)
--------
DOF2
->
ZmHOX2a(2)
>>>>>>>>>
RAP2.2
-
ZmHOX2a(2)
--------->
ARR11(3)
<--------
---
ARR11(3)
<---------
ARR11(3)
<---------
MYB59
---
ARR14(2)
--------->
CCA1(1)
--------->
TOE2(3)
-->
ARR14(2)
<----------
DOF2
--------->
YAB1
----------------->
AG
-->
ARR11(3)
<----------
DOF2
--------->
AHL20(2)
<---------
ANAC55(2)
->
GLK1(1)
<-----------
GT1
<---------
ICU4
--------->
AHL20(2)
---------
--
GLK1(1)
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<------------
CBF
ctttgccgt
aaataaatgaataactttcttttcattttttatactaataatatctaaaactgcaaattaaacccaaaaaatacctaaattgtttagctaa
8079400
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
----------->
GT1
<---------
YAB1
----------->
GT1
<---------
ANAC58
<---------
ICU4
<---------
ANAC46
--------->
YAB1
<---------
ANAC58
-
--------->
ICU4
<----------
DOF2
<---------
ZAT6
----
--------->
ANAC58
<---------
ICU4
<---------
ZAT6
<---------
YAB1
<---
-
At4g35610
----------->
GT1
--------->
AHL20(2)
<---------
ANAC55(2)
<-----
>
At4g35610
--------->
ANAC58
<---------
AHL20(2)
<---------
ANAC46
--------->
MYB46(3)
aactgcaaatggccaagtaaaaatgataaatttcataaaaatgactcttttgagtgttacttatagtcttatagaccatagtattcaacaaatattgtta
8079500
--------->
GLK1(1)
<---------
GLK1(1)
<---------
ARR11(3)
<---------
ANAC46
--------->
ARR11(3)
------>
TEIL
--------->
MYB46(3)
<---------
GLK1(1)
--------->
CCA1(2)
----->
ANAC55(2)
>>>>>>>>>>>>>>>>>
LFY
<---------
CCA1(2)
--------->
ARR11(3)
------
ANAC55(2)
<-----------
GT1
--------->
GLK1(1)
<---------
ARR11(3)
---
------
GT1
<---------
ICU4
<----------
DOF2
---------->
DOF2
<----
cgaatttgtttgagtataaatactgtgatactaatttctatccactgtcttttgtttggatatctcacaattgaaagatatcagacaaatagagctagtg
8079600
<---------
ZAT14
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<----------
DOF2
<---------
ARR11(3)
--------->
AHL20(2)
----------->
GT1
--------->
ALFIN1
<---------
AHL20(2)
-------->
GT1
--------->
ARR11(3)
<---------
YAB1
--------->
YAB1
-----
ZAT14
--------->
GLK1(1)
<---------
MYB52(1)
----------->
GT1
<--------
aagtttaatagagtgaaatcttttgagtggagttatctatatttttctgttattttaaatcgtgttattctatccaattgtaaaacttctaatttttcat
8079700
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<--------
HAHB4
-------->
ATHB1
-------->
HAHB4
--------->
ATHB51
--------->
YAB1
<---------
AHL20(2)
<---------
ICU4
<---------
ATHB51
--------->
ICU4
<---------
YAB1
<--------
ATHB1
<---------
ICU4
-------->
HAHB4
--------->
ATHB51
<--------
HAHB4
--------->
YAB1
--------->
ICU4
<---------
YAB1
<---------
ATHB51
--------->
AHL20(2)
------>
ZmHOX2a(2)
<---------
YAB1
<---------
AHL20(2)
<------
ZmHOX2a(2)
--------->
AHL20(1)
<---------
YAB1
<---------
ARR11(3)
--------->
AHL20(2)
<---------
ICU4
--------->
ARR11(3)
<---------
AHL20(2)
--------->
ICU4
--------->
AGP1
----------->
GT1
--------->
YAB1
<---------
YAB1
<---------
ANAC58
<-----------
GT1
--------->
YAB1
<-----------
GT1
<---------
ANAC58
<----------
DOF2
<---------
YAB1
<---------
AHL20(2)
------
---
GT1
<---------
ANAC46
<-----------
GT1
--------->
TOE2(3)
<---------
ICU4
<-----
ttttgtcatttgtgtgagatcttaaaaccaatttttagcctttaaaccagtttaaaacattataataattattaattttgacattattatttgataattt
8079800
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AGI:
At4g13980.1
Description:
AT-HSFA5 (Arabidopsis thaliana heat shock transcription factor A5); DNA binding / transcription factor. Identical to Heat stress transcription factor A-5 (HSFA5) [Arabidopsis Thaliana] (GB:Q94BZ5;GB:O23259;GB:Q56X02); similar to ATHSFA1E (Arabidopsis thaliana heat shock transcription factor A1E), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G02990.1); similar to AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G18880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69275.1); contains InterPro domain Winged helix repressor
Range:
from: 8076975
to: 8079309
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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