Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <-----------GT1                                                   --------->GLK1(1)                    <---------ATHB12                                                   <---------GLK1(1)    --------------->AGL15                              <---------------AtSPL8  --------->At4g35610      <---------MYB46(3)      <---------MYB46(3)   <---------YAB1--------->TOE2(3)        --------->ZAT14      ------>MYB83      <------MYB46(1)     <---------TOE1(2)       <---------ARR14(2)    <----------DOF2------>MYB46(1)      <------MYB83        <---------TOE2(2)       --------->ARR14(2)   <-----------------AGL3  ------  --------->MYB52(2) ------->TEIL        --------->TOE1(3)       <----------DOF2      --------->WOX13(1)   tgtttagttggtttcttctattgaatcttatgttagtacaaaacctgaatgggatttgctgaaaactctttactctttttttggttaccaatcaattcgg  8022200                     <---------ANAC58                    --------->MYB46(2)                    --------->MYB111(1)                  <---------MYB52(1)               <------NtERF2              ------>NtERF2      --------->AHL20(1)      --------->AHL20(2)      <---------AHL20(2)      <---------YAB1      <---------AHL20(1)<-------TEIL                                                          <------   --------->AHL20(2)<------MYB83  <---------ANAC55(2)                                       --------   --------->AHL20(1)<---------ANAC58                                               ------>ZmHOX2a(1)   <---------AHL20(2)<---------ANAC46            <----------DOF2                  ----------->RAV1(2)   <---------AHL20(1)<------MYB46(1)    <-----------GT1                       <-----------GT1-------- ----->GT1   <-----------------AGL1--------->ANAC55(2)                <-----------GT1    ------>ZmHOX2a(1)   tttaatattttattgcccccattaggtgcattctaatacgtcttaccatttctttcattcacttgtgcttatataccatttcactcctgtcctatacata  8022300                           <---------YAB1                         <---------ANAC58                         --------->bZIP60(1)                                                 --------                         <---------ANAC46           --------->ALFIN1             --------->ARR14(2) ---MYB59                <---------ANAC58         <---------ANAC46        ---------->DOF2  <---------YAB1 ->ANAC46        <----------DOF2        <-----------GT1     <----------DOF2      <---------ARR14(2) ->ANAC55(2)<-------TEIL <---------bZIP60(1)     <---------TOE2(3)  ---------->DOF2   --------->ANAC46   acttcgattcaagtttcatcttttgtgtcgtgattcacgtttaaaccatttgaggtggaaaacttttatacaaagtcaaagccgatacacatcatgaaag  8022400                                    <---------YAB1                             -------->HAHB4                             <---------ICU4                             <--------ATHB1                            <---------ATHB12                                     --------->TOE2(3)                            --------->ICU4                                       --------->AtMYB61                            <---------YAB1                      --------->AHL20(2)                          --------->YAB1           <---------AHL20(2)           --------->ANAC46    <----------ID1      <---------YAB1            --------->AHL20(2)          <---------ALFIN1 -->DOF2----------->RAV1(1)<---------TOE2(3)   --------->ATHB12 <---------AHL20(2)             <-----   cagagagcgacaacatttgattcgctattaatgattctataattccacatgatttattcgctatattaaaatactatcgtccacctaaacttgttttcca  8022500                                                                                    --------->At4g35610                                                                                 <------ZmHOX2a(2)                                                             <-------TEIL       --------->ARR14(2)                                                     <----------DOF2            --------->ARR11(3)                                                  ------>MYB46(1)               <---------ARR11(3)                           ------>ZmHOX2a(1)      ------>MYB83        <----------DOF2              -- ----AtLEC2     ------>ZmHOX2a(1)               <---------MYB59 <---------At4g35610 <---------At4g35610   tggctccattctctattcctccaaaactcctaattttgtgtctacttaaacctaactttgacatacatctgtctttgttcaagatcagcttaaaacatgg  8022600                                 --------------->AGL15                                 <---------------AGL15                             <----------DOF2                       --------->ATHB51                       --------->AHL20(2)                                                     <------                       <---------ICU4                                                    ---------->DOF2                       <---------AHL20(2)                                          <---------AHL20(2)                      --------->ICU4                                               --------->AHL20(2)                      <---------YAB1          <-------TEIL                        <---------AHL20(2)                   --------->AHL20(2)     --------->ARR11(3)                   --------->AHL20(2)                 ----------->GT1 <----------DOF2                               <---------AHL20(2) ------>P --------->ANAC46<-----------GT1 <---------ARR11(3)                  <---------AHL20(2)   <-   ctaccagggtttacgtcggaagtaattatttctttcttttagtagatgttcatttttcaaatttgttttctcaagttttatttatttatttgaaagcttt  8022700                          --------->ZAT6                          --------->AtMYB61                         --------->MYB46(3)                        ------>MYB83                      <---------MYB46(2)                      <---------MYB55(2)                      --------->MYB46(3)                      --------->DREB2C(2)                      --------->DEAR3(1)                      --------->DEAR4(1)                         --------->ANAC58              <---------GLK1(1)                                  <---------ANAC55(2)              <------ZmHOX2a(2)                                  --------->ANAC58             --------->ARR14(2)                                 <---------LBD16             <---------AGP1                                   --------->ARR14(2)             <---------ARR14(2)                             --------->LBD16             <---------ARR11(3)                             ------>NtERF2             --------->AGP1 <---------MYB52(2)             <---------RAP2.6(2)             --------->ARR11(3)                           <---------LBD16            <---------CCA1(2) --------->MYB52(1)          ----------------->AGL1       <---------ANAC58 ------>MYB46(1)                   <-----------------AGL1                   --       <---------ANAC58--------->ORA47(1)             <----------DOF2                ---------->DOF2  --------->ATHB12   --------->DEAR3(2)              <---------DAG2               --------->At5g28300 <---------YAB1------>ZmHOX2a(2)                  --------->ANAC58  <---------ARR14(2)     <--------- ----DOF2   <---------At4g35610                   --------->ANAC58  --------->ARR14(2)    <---------DAG2 ----------GT1--------->GLK1(1)              <---------ANAC46 <---------ARR14(2) ----------->GT1 ----   gttacgattgcttcagatctctcaccgaccactaccgatgatatgttgagggaagccttttccggctacggaaacgtagtagatggtaaaagccttttgg  8022800                                                                                --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                <---------YAB1                                                                                --------->ICU4                          <---------ANAC46                                      --------->AHL20(1)              <---------ICU4                                              --------->ANAC46    <------            <---------TOE2(3)                    <----------DOF2        --------->REM1(1)     -------          <---------AHL20(2)                  <---------AtMYB61        --------->ZAT14   <---------ANAC58          --------->AHL20(2)      <-----------RAV1(1)                  <---------ZAT14   <---------ANAC58         <---------ATHB12 <---------ANAC58  --------->ALFIN1       <-----------GT1  --------->ATHB51  --------->DEAR3(1)      <---------ANAC58<---------ANAC58         --------->ZAT6-------->ATHB1 ---->ZmHOX2a(2)        --------->GLK1(2) <---------ANAC46       <-----------HVH21 <---------YAB1 -DOF2   --------->AHL20(2)      <---------TOE2(3)            <---------At4g35610--------->YAB1 ----->ARR14(2)     --------->LBD16       <---------ANAC58    --------->At4g35610<---------ICU4   atcgccctccaattaatatttccgagtttcttgtttatgttgttgagtgtggtttaagtttctcagttgtcactacaccaaaattattattgtttgtgca  8022900                                                                                        <---------ANAC46                                <-----------RAV1(2)                                <---------ANAC58                            <------MYB83                                --------->ZAT2<---------ARR14(2)                            <------MYB46(1)                             <---------ZAT2--------->ARR14(2)                           --------->MYB59                   <-----------HVH21     <---------ANAC58                         <---------ARR14(2)               <---------At4g35610    --------->At4g35610                         --------->ARR14(2)               --------->At4g35610 <---------At4g35610                   <-------TEIL<-------TEIL               --------->ZAT14     --------->At4g35610  --------->YAB1  --------->CCA1(2)                    ---------->DOF2  --------->At4g35610 ---ZAT18        --------->ARR14(2)                    <-------TEIL     <---------At4g35610    <----- -->ZAT18        <---------ARR14(2)             <-----------HVH21    --------->LBD16  <-----------HVH21   gcaattgtaatgagagacagatacacagataggtccaggggttttggatttgtcacatacagcagtcactccgaagctgaagcagccgtgtctgggatgg  8023000                                      <---------ANAC46                                      <---------ANAC58                                       <-------                                      <---------ANAC58                                    --------->ANAC46                              --------->YAB1                      <---------YAB1          --------->LBD16                         ----------->GT1        --------------->AGL15             <---------AHL20(2)                  --------------->AGL15         <---------------AGL15       <---------ANAC58 --------                  <---------------AGL15        ----------------->AGL2       <---------ANAC58<------ZmHOX2a(1)          <---------AtLEC2   <---------YAB1    <-----------------AGL3   <---------ANAC58 --------->HSFB2a(2)   --------->DAG2<-----------------AGL3        <-----------------AGL2   <---------ANAC58 <---------LBD16 ----MYB46(3)    ===============================================MADS_MADS<----------DOF2 <---------HSFB2a(2)   atggaaaggtttggatggctctatttgtggtataatagttgtgtgtctgtctatatgtggtcagacttagtattgctttcgttttaaatttccaggaact  8023100  Previous    Next  AGI:  At4g13850.1    Description:  ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / double-stranded DNA binding / single-stranded DNA binding. Identical to Glycine-rich RNA-binding protein 2, mitochondrial precursor (GRP2) [Arabidopsis Thaliana] (GB:Q9SVM8;GB:Q39105;GB:Q41988); similar to GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4), RNA binding / double-stranded DNA binding / single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT3G23830.1); similar to GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4), RNA binding [Arabidopsis thaliana] (TAIR:AT3G23830.2); similar to glycine-rich RNA-binding protein PsGRBP [Pisum sativum] (GB:AAB71417.1); contains InterPro Range:  from: 8020948    to: 8022256    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g13860.1    Description:  glycine-rich RNA-binding protein, putative. similar to ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT4G13850.3); similar to ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT4G13850.4); similar to ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2), RNA binding [Arabidopsis thaliana] (TAIR:AT4G13850.2); similar to predicted protein [Laccaria bicolor S238N-H82] (GB:EDR09150.1); contains InterPro domain RNA recognition motif, glycine rich protein (InterPro:IPR015465); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta Range:  from: 8022597    to: 8023158    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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