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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                --------->YAB1
             <----------DOF2                               <---------DAG2                <---------YAB1
        <-----------GT1          <---------ANAC46          <----------DOF2             <---------AHL20(2)
 <---------AHL20(2)            <-----------GT1       <-----------GT1                  <---------AHL20(2)
--------->AHL20(2)  <----------DOF2             <---------AHL20(2)             <-----------GT1
>ARR14(2) <-----------GT1 <---------AHL20(2)    --------->AHL20(2)      ----------->GT1--------->AHL20(2)
 
caatttaaaattttctcttttctctttattttttttacgtctaagacatttttaattttctcctttatcaaaatactgtatataacttatttattttaga  7962000
                         --------->ARR11(3)       --------->ATHB12
                         --------->GLK1(2)        <---------ICU4
                         <---------ARR14(2)      <---------YAB1
                         <---------ARR11(3)      <---------ATHB12
                         --------->ARR14(2)      --------->ICU4         ---------->DOF2
                        <---------ARR14(1)     <---------ICU4        --------->ANAC58
                    <---------At5g28300       --------->ICU4         --------->ANAC58
                   <-----------GT1          --------->YAB1        --------->TOE2(3)
               --------->AHL20(2)         <---------ARR11(3)      --------->TOE1(2)
               <---------AHL20(2)         --------->ARR11(3)      --------->TOE2(2)
              <---------AHL20(2)        <---------YAB1            --------->TOE1(3)
           <---------AHL20(2)        <------ZmHOX2a(2)     --------->MYB59
          <---------AHL20(2)   <---------AtLEC2--------->YAB1<------ZmHOX2a(1)         <------------
      <----------DOF2--------->ZAT6  ===============================HOX2a_HOX2a <---------ZAT6
 
aaatgttctcttttttatttatttacagtatcttgaatggatcaagataataatcattcgattaggaaacctaagcaaagttagtgagagtaagtactaa  7962100
                                                                     <------ZmHOX2a(1)
                                                            --------->YAB1
                                                           <---------YAB1
                                                          <---------AHL20(2)
                                                          --------->AHL20(2)---------->DOF2
                                               --------->ANAC46     --------->ICU4
                                               --------->ANAC55(2)--------->YAB1
                                               --------->ANAC58   <---------ICU4           <--------
                                              <---------LBD16  --------->YAB1        ---------------
                                ----------->GT1--------->ANAC58<---------ICU4     <------ZmHOX2a(1)
       <---------YAB1           <---------MYB46(3)       --------->YAB1  --------->YAB1    <--------
---AtSPL8         ----------->GT1   <---------AHL20(2) ------->TEIL<---------TOE2(3) <--------------
 
gtaacatttgattatacagaaatgtaaaaaatcgatggtttaattcttctacggaacgaattttaataataaggattaataaagaggattagtactttat  7962200
                                                <---------At5g28300                    ------>ZmHOX2a(2)
                         --------->ICU4         <---------LBD16                       --------->GLK1(1)
                         <---------ARR14(2)    <---------ICU4                         <------ZmHOX2a(2)
                        <-------GAMYB          <-----------GT1                       <---------ARR14(2)
                       <---------MYB46(3)   -------->HAHB4                           <---------AGP1
                   --------->ANAC58         --------->ATHB51                         --------->ARR11(3)
                   <---------RAP2.6(2)      <---------ICU4                           --------->ARR14(2)
                   <---------ANAC55(2)      <--------ATHB1                          <------ZmHOX2a(1)
                   --------->ANAC58         <--------HAHB4                        <---------TOE1(2)
                  --------->RAP2.6(3)       --------->YAB1                       --------->LBD16
                <---------ARR14(2)         <---------ATHB51                     <---------TOE2(1)
                <---------MYB52(1)         <---------YAB1                       <---------TOE1(1)
                --------->ARR14(2)         --------->ICU4                      ------>ZmHOX2a(2)
               <-------GAMYB               --------->AHL20(2)                 =============HOX2a_HOX2a
               <-----------HVH21        >>>>>>>>>GT-1                         <------ZmHOX2a(2)
              <---------MYB46(3)     <------MYB46(1)                         --------->ARR14(2)
              <---------DEAR3(2)     ----------->GT1                         <---------ARR14(2)
-DAG2        <---------DEAR3(1)  <---------ARR14(2)                         <---------GLK1(1)     --
>AtSPL8      <---------ANAC46    --------->ARR14(2)                  --------->ANAC58<-----------ARR10
--DOF2     ------------>MYB.PH3(1)   <------MYB83                  --------->MYB52(1)--------->GLK1(2)
-AtSPL8    ------------>AtMYB77 <------ZmHOX2a(1)<---------RAP2.6(2) --------->ANAC58<---------ARR11(3)
 
acacatgagacaagaggcggttacggcagttatgaggatttggttaataattacggcgttagaattaggggaacggaagggatccgaggatctcaacata  7962300
                                                                  --------->TOE2(3)
                                                                  --------->TOE1(3)
                                                                <---------TOE1(3)
                                                       --------->TGA1a
                                                       <---------O2
                                                       <---------ANAC46
                                                       <---------ANAC58
                                                       =================================bZIP_DOF
                                                       <---------ANAC58             <---------ANAC58
                                                       --------->O2                 <---------ANAC55(1)
                                                       <---------TGA1a              <---------ANAC46
                                ------->GAMYB         <------NtERF2--------->DOF5.7(2)
                                =================================MYC_MYB        <------------CBF
                               --------->MYB46(3)    <---------RAP2.3(1)       --------->ATHB12
                 <------ZmHOX2a(2)                  <---------RAP2.6(2)      <----------DOF2
                <---------ARR11(3)          <---------MYB52(1)  <---------TOE2(3)   <---------ANAC58
          ----------->GT1      <---------MYB52(2)   <---------DEAR3(1)<---------TOE1(3)<---------ARR14(2)
        >>>>>>>>>ARR1        ----------->RAV1(1)   --------->At4g35610<---------TOE2(3)--------->ARR14(2)
        >>>>>>>>>ARR2 --------->DAG2       <-------GAMYB --------->ALFIN1    <---------DAG2   ------
      <---------TOE2(3)     <----------ID1 ======================MYC_MYB--------->TOE2(3) ----------
      <---------YAB1 ---------->DOF2      <---------ANAC46     <---------DOF5.7(2)  <---------ANAC55(2)
--------->MYB46(3)   ============================================bZIP_DOF<---------MYB52(1) <-------
------->MYB52(1)--------->ARR11(3) --------->YAB1 --------->MYB52(1) <---------DOF5.7(2)----------->TBP
 
tcaacggctaagattgtaagatcaaaaagtagcaacaaacatattccgttaagtagcggcgtgtgttaacgttaacgttactttattgcgtatatataaa  7962400
                        --------->ZAT6
                       <---------ZAT18
                       --------->ZAT18                                              --------->LBD16
                     --------->ZAT18                                               <---------HSFB2a(2)
                     --------->ZAT14                                               <---------------AGL15
                     <---------ZAT14                                               --------->HSFB2a(2)
         <---------ANAC58                                               --------->LBD16    ---------
         <---------ANAC58                                  <----------DOF2        <---------LBD16
------------>AtMYB77 <---------ZAT18            <<<<<<<<<TBF1  <-----------GT1    ----------------->AGL3
--->MYB52(1)    <---------ANAC58             <<<<<<<<<TBF1 <---------DAG2 <---------MYB52(1)   <----
->TBP    <---------ANAC46  *TSS       XXXXXXXXXXXXXXXXXXXX>MIR847      --------->LBD16   --------->DAG2
--AHL20(2)      <---------ANAC58  <-----------HVH21<<<<<<<<<TBF1      <---------LBD16   ---------->DOF2
 
cggagacggtttccttggagcttgtgcacactaaatctgtcactcttcttcttcttcttctacttttctctctcccggttattttcccagaaaaagtgcg  7962500
             <----------DOF2
        --------->WRKY38(1)
       <---------MYB52(1)
      <-------GAMYB
     <---------ANAC46                                      <---------GLK1(2)
 --------->KAN4(2)                             <------NtERF2
<---------HSFC1(2)                           <---------bZIP60(1)
--------->HSFB2a(1)                          --------->bZIP60(1)
--------->HSFC1(2)              ---------->DOF2--------->ATERF1(1)
<---------HSFB2a(1)          >>>>>>>>>TBF1   <---------ANAC58                                     <-
>TOE1(2)--------->WRKY12  >>>>>>>>>TBF1      <---------ANAC46                             ----------
-----HSFB2a(2)         >>>>>>>>>TBF1         <---------ANAC58               <-----------RAV1(1)   --
 
agaaaattccgttgagctttagagaagaagaagaagaaagcttcaatggcgtcgtcttctcagaaactgatcagtgtttgtgtcgctgtgctcgtcgtct  7962600
                                                                          <-----------GT1
                                                                      <----------DOF2
                                                                <---------HSFB2a(1)
                                                                <---------HSFC1(2)
                                                                --------->HSFC1(2)
                    --------->LBD16                             --------->HSFB2a(1)
           <---------YAB1                                      <---------ARR14(2)
           ----------->ARR10                                   ------->TEIL---------->ID1
           --------->ICU4                                      <---------ARR11(1)
        <---------DEAR3(1)                                    <---------CCA1(2)
     --------->ANAC46    ----------->GT1                      <---------ARR14(1)
  ----------->HVH21--------->HSFB2a(2)                     --------->HSFB2a(2)
 <-----------HVH21 <---------HSFB2a(2)                     --------->HSFC1(1)
--------At4g35610  --------->ANAC46                        <---------HSFB2a(2) <----------DOF2
>ID1<---------LBD16--------->ANAC55(2)          <----------DOF2<-----------ARR10             <------
------->At4g35610 <---------LBD16            <---------ARR11(3)--------->ARR14(2)        <---------AHL20(2)
 
tagctctcacggcgatgattttccggaacagtgaaatctctctctctaggtctttttctcttctcgaatcttccttttttctctttcgatgtttatttat  7962700
                                                                   <-----------GT1
       <---------MYB52(1)                                        <---------HSFC1(2)
       ---------->ID1                                            --------->HSFB2a(1)
      <-------GAMYB                  ----------->GT1             <---------HSFB2a(1)         <------
     <---------ANAC58            <-------TEIL                    --------->HSFC1(2)   ------->TEIL
     <---------ANAC46         <---------At4g35610               <---------KAN4(2)<-------GAMYB
     <---------ANAC58         --------->At4g35610     --------->ATHB12          --------->MYB52(2)
  <---------MYB52(1)   <----------DOF2--------->TOE2(3)--------->ARR11(3)       <---------MYB46(3)
-----GT1             ----------------->AGL3         <---------WOX13(1)        <---------MYB52(1)
 
cttctgtttcgttgtttttaagtctcctttttaagctgcattgttaatttctgtgaatgattttgagaattttccatctctgtttgttgaatctcgcttc  7962800
                                            <---------AGP1
                                            <---------ARR11(3)
                                            ------->TEIL
                                   <---------------AGL15
                                   --------------->AGL15
                                  ----------------->AGL3
                                  <-----------------AGL2                                     -------
                                  <-----------------AGL3              <---------YAB1        --------
                               <----------DOF2             <------ZmHOX2a(1)                --------
                              <---------ANAC58------>ZmHOX2a(2) <---------YAB1           <---------At4g35610
                         <---------GLK1(2)  --------->ARR11(3)  <---------MYB52(1)       --------->At4g35610
      <----------DOF2  ----------->ARR10    --------->ARR14(2) <-------GAMYB<---------ARR11(3)  ----
      --------------------->WRI1  ==================================================================
 <-------TEIL  <-----------GT1<---------ANAC58====================HOX2a_HOX2a       --------->YAB1
----DOF2  ---------->ID1 --------->ARR14(2) <---------ARR14(2)<---------ZAT6--------->ARR11(3)  <---
 
acgattcatctttgtttttttcttcttagatttgctttctgtttatggatcttgaaattttaggactgttattgtgaaagatttcaattttaagctccag  7962900
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AGI:  At4g13710.1   
Description:  pectate lyase family protein. Identical to Probable pectate lyase 15 precursor [Arabidopsis Thaliana] (GB:Q944R1;GB:O23668;GB:Q9SVP1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT1G04680.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G24230.1); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT3G07010.1); similar to unknown [Populus trichocarpa] (GB:ABK96205.1); similar to pectate lyase [Prunus persica] (GB:BAF43573.1); similar to unknown [Populus trichocarpa] (GB:ABK95980.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain
Range:  from: 7962428    to: 7966457    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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