Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ANAC46                              <---------AHL20(2)                             <---------AHL20(2)           <-------GAMYB     <---------AHL20(1)        <---------ANAC58     --------->AHL20(1)        <-------GAMYB                 --------->AHL20(2)        <---------ANAC58     --------->ARR11(3)     <---------ANAC58             <---------AHL20(2)        <---------ANAC46     --------->AHL20(2)     <---------ANAC58            --------->AHL20(2) ----------GT1               <---------ARR11(3)     <---------ANAC46            <---------AHL20(2) ----AHL20(2)               --------->AHL20(2)<----------DOF2       <---------HSFB2a(2)            <- --->AHL20(2)          ----------------->AGL3 <---------DAG2        --------->HSFB2a(2)       <------   aatactatttgggtgttatttgtgttccaaatatatttatgtgtaaaactttttgggtgttatttgtgttccaaaaacttgattaaataaaacaattttc  7612900                                            <---------AHL20(2)                                            --------->AHL20(2)                                         <---------AHL20(1)                                         --------->ARR11(3)                                         --------->AHL20(1)         <----------DOF2        <---------YAB1        <---------AHL20(2)               <---------ARR11(3)   --------->AHL20(2)         --------->YAB1        --------->AHL20(2)              <---------AHL20(2)    <---------ICU4   <-----------GT1     <---------ICU4               ----------->GT1   --------->YAB1  <---------DAG2      <---------YAB1  --------->YAB1       --------->YAB1  --------->ICU4         <---------AHL20(2)     --------->AHL20(2) ---------DOF2      <----------DOF2 --------->AHL20(2)       --------->AHL20(2)--------->YAB1     --- -----GT1      <-----------GT1   ------->TEIL    <-----------GT1 <-----------GT1     <---------AHL20(2)   tctttaatatttattttttacactttcataagatgtatgtaaatatttttttaactataactaattaatactttttctaaataacaatttatgatgagaa  7613000                                                                                            <--------                                                                                            <--------                                                                                           --------->ARR11(3)                                  --------->YAB1                                     <---------ICU4                                  --------->AHL20(2)          --------->YAB1         --------->YAB1                       <---------AHL20(2)                   ----------->GT1         --------->ICU4                      --------->AHL20(2)           <-----------RAV1(1)            --------->YAB1                      --------->AHL20(1)          <---------TOE2(2)              <---------AHL20(2) ------>ICU4          <---------AHL20(2)          <---------TOE1(2)     ----------->GT1    <---------ARR11(3)   atgtttagtttatgtttttctaaatttaatatacaattaaaaaaaaaactcgcatgttggacaagtataatctattgttatatataatcatgagattttt  7613100                                                                                 <---------AHL20(2)                                                                                <---------AHL20(1)                                                                                <---------ARR11(3)                       <---------YAB1                                           --------->ARR11(3)                     <---------ICU4                                             --------->AHL20(2)                     -------->ATHB1                                             <---------AHL20(2)                     --------->YAB1                                            --------->AHL20(2)                     --------->ATHB51                                       <---------ICU4                    --------->ICU4<---------YAB1                            <---------AHL20(2)                    <---------ATHB12                                       --------->AHL20(2)                    <---------ATHB51                                     --------->YAB1                  --------->WOX13(1)    <---------MYB52(1)          --------->ICU4       <---------YAB1<--------HAHB4 <-----------GT1                --------->ANAC55(2)    <---------ALFIN1 -RVE1(1) <---------TOE2(3)      <---------AHL20(2)              <-----------GT1--------->AHL20(1) -CCA1(1) <---------YAB1       <---------YAB1           <-----------GT1<---------YAB1<-----------GT1-   tgttccaccattatcgttgtcaattattattctattattttcgtttttttctagcatttatctgtttttacttattaataaatatattttcaacacattg  7613200                                                              <---------AHL20(2)                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                           ------>MYB46(1)                                                           ------>MYB83                                                         ------->GAMYB                                                        --------->MYB46(3)                                                       ------>MYB46(1)                                                       ------>MYB83                                                       -------->P                       <---------AtLEC2                           <-----------GT1            --------->MYB55(1)               <-------TEIL                      <---------AHL20(2)             <---------MYB111(2)          <--------P                      --------->AHL20(2)             <---------MYB46(2)         <---------MYB46(3)                     --------->AHL20(2)              --------->MYB46(3)        --------->ALFIN1                 --------->AHL20(1)                  <---------MYB111(1)    --------->DAG2                 <---------AHL20(1)              --------->WRKY12         ---------->DOF2    ------->TEIL                 <---------ARR11(3)              --------->WRKY38(1)    ----------------->AGL1 -------->AHL20(2)--------->AHL20(2)            --------->DOF5.7(2)   <----------ID1--------->At4g35610   ttttaaatagttttgtcaaaatatttaattttccttctggtcttctcagcgtttaccaaccaaataaatagagggccaaaggtggtagatgcatgaacct  7613300             *TSS       --------->AtMYB61                                                                      <------       <---------ALFIN1               <----------DOF2                                         -------     ----------->RAV1(1)        <---------CCA1(2)                                  --------->AGP1    <---------ALFIN1      <-----------GT1<---------ARR11(3)                      --------->LBD16    --------->AtMYB61   --------->AHL20(2)                                      <---------HSFB2a(2) --------->ZAT6         <---------AHL20(2)  <----------DOF2                     --------->HSFB2a(2)   ctaacaccaccacaacttcaacacaattaaactcgtctctctttatctttctctctctctctcttctgttcattaacaaaatccagaactatatgagacc  7613400                                                        <-----------GT1                                                     --------->ARR14(2)                                         ------>ZmHOX2a(1)                                        --------->TOE2(3)   --------->LBD16                     -----                                        --------->TOE1(3) <---------LBD16                       <----                                 <---------ATHB12    <---------ARR14(2)                         -----           <---------ALFIN1 --------->TOE2(3)        <---------ARR11(3)                         <----         -------->P   --------------->AtSPL3         <---------GLK1(2)                      <--------  <-----------HVH21   <---------------AtSPL3         --------->ARR11(3)  <-----------GT1   <---------AHL20(2) ---ARR11(3)          <---------------AtSPL8       ----------->ARR10  <----------DOF2      --------->AHL20(2) -->ARR11(3)          --------------->AtSPL8 <---------WOX13(1)  <-----------GT1     <---------MYB52(1)   ttgttgtcacttaccaccttcttagaggtacctcaatcgtttccttaattgctcagattttccggtttaactctttaaccggtctctgttttttttaata  7613500   ---------->DOF2                                                             <---------ANAC46 ---->ARR14(2)                                    --------->ZAT18             <---------At4g35610 -----ARR14(2)                <------MYB83        <---------ZAT14          <-------GAMYB ---->ARR11(3)                <------MYB46(1)  <---------ANAC46           <---------MYB46(3) -----ARR11(3)               <---------AtMYB61 <---------ANAC58          ---------->ID1 ---GT1 <----------DOF2     <---------WOX13(1) <---------ANAC58        <-----------RAV1(1)   <-------   tcccctaaagctttgattttgatgcaatggattggtttctattgagtttgtgtgcaatgggtatgtttagtttttgtcgttgctgattttgtttctctgg  7613600                                                                                  --------->WRKY12                                                    <---------WOX13(1)          <---------At4g35610                                                 <---------YAB1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   <-----------GT1--------->ATHB12   ------->TEIL --------->WRKY38(1)                        <---------ANAC58   =====================HOX2a_HOX2a     <-------GAMYB                        <---------ANAC58   ------>ZmHOX2a(1)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --LBD16               ---------->ID1 <----------DOF2    <------ZmHOX2a(2)     <-----------RAV1(1)   agaagactaatccattctcatatttggcttcttgttttttctttcctcttcttgattggatcaaatccatgaacccatcttctgttgactctggttttta  7613700                                            <------MYB83                                           <---------TOE2(2)                                           <---------TOE1(2)                                          <---------MYB55(1)                                          <--------P                                        <---------MYB46(3)                                       <---------AtMYB61                                       --------->ALFIN1                                      <------NtERF2                                    <---------ANAC58                                    <---------DEAR3(1)                                    <---------ANAC46                                    <---------ANAC58                                    <---------RAP2.6(2)                                    <---------DREB2C(2)                                   <------NtERF2                                   --------->ATERF1(1)                   --------->GLK1(2)<---------DEAR4(1)                       <------MYB46(1)                   --------->ARR14(2) <-------GAMYB                          <------MYB83                   <---------ARR14(2)<---------MYB46(3)                 --------->ATHB12               --------->YAB1      <---------ABI4(1)                  --------------->AGL15    ------              <---------YAB1     --------->ALFIN1     <---------YAB1  ===============================       <---------TOE1(2)         <---------DEAR3(1)---------->ID1 --------->WRKY12          ---------       <---------TOE2(2)      --------->DAG2<------MYB46(1)       --------->WRKY38(1)       <--------       <---------TOE1(3)     --------->DAG2--------->MYB59      --------->At4g35610         ---------       <---------TOE2(3)    ---------->DOF2--------->MYB111(1)<------ZmHOX2a(1)    ---------->DOF2 --   <---------At4g35610  --------->AtLEC2--------->MYB55(2)  <---------TOE2(3)----------->GT1<--------   gatttagcttaggtttatgagaatccatgaaaaaggtggcggtggtaggttttgttcttattgaggagttgacttgatttggttaaaaagtcttccttga  7613800  Previous    Next  AGI:  At4g13040.1    Description:  AP2 domain-containing transcription factor family protein. Identical to Ethylene-responsive transcription factor-like protein At4g13040 [Arabidopsis Thaliana] (GB:Q56XP9;GB:Q9SV65); similar to unknown [Picea sitchensis] (GB:ABK22350.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 7613313    to: 7615383    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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