Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ->PIF4 --MYC3 --PIF4                               --------->TOE2(2) ->MYC3                              <---------ANAC55(1) --MYC2                              --------->ANAC55(2) ->MYC4                              <---------ANAC46 --MYC4                              <---------ANAC55(2)                                        ----- ->PIF5                              <---------ANAC58                                          <----- ->MYC2                            --------->MYB52(1)                                          ------ --PIF5                         --------->ANAC55(2)                                           <------ ---TGA1a                       --------->ANAC46                         ----------->ARR10    ------- -->TGA1a               <----------DOF2                               <---------ANAC58        ------- ---O2                  <---------DAG2--------->TOE1(2)               <---------ANAC58        <------ -->O2               <---------ALFIN1<---------ANAC58            <----------DOF2          ---------->DOF2 --TOE1(2)        <-----------GT1<---------MYB52(2)      ----------->HVH21    ----------->GT1-------- ----OsbHLH66 ------->TEIL--------->AHL20(2)           --------->O2   <---------ANAC46<--------------   gtattgttttgctatgcatttctccactttatataagtaacgtatgatgcgatgtccatgtgaccagcttttgcttagatttgttacaagagaaaagatc  7536700 ->ZmHOX2a(2) -ZmHOX2a(2)                              <---------LBD16 --->CCA1(2)                --------->AHL20(2)                                              --------- ---ARR11(3)               <---------ATHB51                                                ---------- -->ARR11(3)               <---------AHL20(2)                                           <------ZmHOX2a(1) -->AGP1                   --------->AHL20(2)                                     <---------YAB1 ---AGP1 ----------->GT1   <---------ATHB12                                      <----------DOF2 ->RVE1(1)      --------->YAB1  <-----------GT1                               <-----------GT1-------- -------WRI1    --------->AHL20(2) <----------DOF2 --------->AHL20(2)       <---------AHL20(2)   taagaaaattagggtgaataatataacaaataattttcttttcactcggaaaattatacaaattgttttagggtcaaatttatctttataggataaagtt  7536800                            <---------AHL20(2)                            --------->AHL20(1)                               <---------MYB52(1)   ---                            <---------AHL20(1)                      --------->TOE2(3)         <------                            --------->AHL20(2)        ------------>CBF  <-----------GT1   --------->TOE2(3) >DAG2               ----------->GT1     <---------TOE1(3)        <-------TEIL <-------TEIL  -------- >DOF2              >>>>>>>>>TBF1        <---------TOE2(3)       --------->CCA1(2)      <-------TEIL< --->GT1     <------------CBF<---------AHL20(2)     <------ZmHOX2a(1)  ---------->DOF2 --------->CCA1(2)   attcatttacatctacattgaagaagaaaataaaatttggattaaggtatatgaggagcaatgtaagatacattaaaccggttcgtaagatacattaaac  7536900                                                            <---------ANAC46                                                            <---------ANAC58                   ------    <---------TOE2(3)                                       <---------ANAC55(2)   --------->MYB52(1) -------->GT1                         <------ZmHOX2a(1)     <---------ANAC58 --------->LBD16  ------- -----GT1                           <---------TOE2(3) --------->AHL20(2)   <---------LBD16    <------ -->DOF2  ----------->GT1     <---------TOE2(3)   --------->LBD16         --------->MYB52(1) <------- ----------DOF2         --------->LBD16         <---------LBD16        --------->YAB1        <-------   cggtttaatgttcagaaaaatcgaaccggattaagttttaggaaaatagaaccggattaatttcgtgaatcaaacataccggattaacagagcttgatct  7537000                                                                         <------ZmHOX2a(2)                                                                         --------->CCA1(2)                                                                         --------->At4g35610                                                                        <---------ARR14(3)                                                                        <---------ARR14(2)                                                             --------->YAB1                                                             <---------ICU4                                                            <---------ATHB12                                                            --------->ICU4------>ZmHOX2a(2)                                                     --------->KAN4(2)  <---------AGP1            <--                                                  <---------ANAC46      --------->ARR11(3)        <--                                                  <---------ANAC58      <---------ARR11(3)       <---                                              ------>ZmHOX2a(2)         --------->AGP1           <---                     --------->DAG2         --------->ARR14(2)         <---------GLK1(1)      <------    --------->MYB52(1)                      <---------AGP1<---------At4g35610                 ------- >ZmHOX2a(2)    ----------------->AGL2      --------->ARR11(3)         --------->GLK1(1)      <------ -->At4g35610   <-----------------AGL2      <---------ARR14(2)      --------->LBD16           <------ ---At4g35610   ----------------->AGL3 <-------GAMYB<----------TaMYB80----------->ARR10       <------ --ARR11(3)    <------ZmHOX2a(2)  <---------ANAC46<---------ANAC58<---------LBD16       ------->TEIL --AGP1------->GAMYB---------->DOF2  <XXXXXXXXXXXXXXXXXXXXXXXMIR405A/B/D--------->ARR14(2)<---------DAG2   gaaacttaacgaactcgatccataaagggttttgttttgtgagttggatctggcttattccgatgatgaccggagatctgaaacttgatgaaccttacgt  7537100 ----MYB46(1)                                                            <---------ANAC58 ----MYB83                                                               <---------ANAC58        <--- ------TOE1(2)                                                           <---------ANAC46        ---- ------TOE2(2)                  --------->ARR11(3)                 <-------GAMYB               <----- ---ANAC58                      <---------ARR11(3)                --------->MYB52(2)          <------ZmHOX2a(2) -->ANAC55(2)            --------->At4g35610                 <---------TOE1(3)               -------- ---ANAC55(2)       >>>>>>>>>TBF1--------->GLK1(1)           <---------TOE2(3)               <------- ---ANAC58      --------->At4g35610                  ---------->DOF2   <---------ANAC46      <------- ---ANAC46    --------->YAB1---------->DOF2  --------->ARR14(2)   <---------MYB46(3)       ----------   aggtttgaaattcgaatcagaagaagaagctaaagatttctatgtagaatactccaaaagattagggtttgttgtgcgtatgatgcagagacgaagatca  7537200                                                                     <------ZmHOX2a(2)                                                                   --------->YAB1                                                                  --------->MYB46(3)                                        --------->ANAC58    <---------ICU4  --------->ICU4                        --------->ANAC46    --------->YAB1 ------ANAC55(2)                        --------->ANAC58   <---------ATHB12                        -- ----->ANAC55(2)                 ----------->GT1           --------->ICU4                          <- ------RAV1(2)                <------MYB83              ------>ZmHOX2a(1)                          <- ->ARR11(3)                   <------MYB46(1)           ====================HOX2a_HOX2a   --------->ZAT18 --ARR11(3)             ----------->ARR10              <---------MYB59                    <---------ZAT18 --ARR14(2)  --------->ZAT6  --------->MYB59      <---------AtMYB61------->GAMYB>>>>>>>ZML2  -------- ->ARR10    --------->ZAT18  <---------TOE2(3)  <----------DOF2 --------->MYB52(1)    >>>>>>>ZML2  --   ggtattgatggaagaacactagcgagaagattaggttgtaacaagcaaggctttggtcctaataatcaacgatcatctagttctagttctagttcacgag  7537300                                                 --------->MYB111(1)                                                 <---------MYB46(3)                                                 ----------->GT1                                                <--------P                                               <---------ANAC58     ---------->DOF2                  --------->LBD16 ------->HSFB2a(1)                  --------->TOE1(2) --------HSFB2a(1)               <---------GLK1(1)          <-------TEIL --------HSFC1(2)                --------->GLK1(1)<-------GAMYB ->ANAC46--------->TOE1(2)  ----------->GT1    <---------ANAC58  ---------->DOF2           --------->ATHB12 ------->HSFC1(2)  ----------->GT1--------->GLK1(2) <-----------GT1         <---------ATHB12   aaggttgcaaagctacgattttggtgaaaatggagaaatctgggaaatgggttgttactagattcatcaaagaacacaatcactctcttcaattcattgg  7537400                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                                                            <---------ANAC46                     <---------TOE1(2)                       <----------DOF2<---------ANAC58                     ------->TEIL                <----------DOF2       <---------ANAC55(2)                    <-----------GT1      <----------DOF2    <---------ANAC58<---------ANAC58      ---               <----------DOF2        ------->TEIL          <---------ANAC58<---------bZIP60(2)   <--         <---------YAB1              <---------CCA1(2)--------->ATHB12 --------->ANAC55(2)        <--   gtcttcttcttatgattcttttgtacgttttcaaagtttgtatctttgggtctttttgatttgctttgctattacatgacttggatgcttgaagaagaca  7537500       <---------At5g28300      <-----------GT1        <---------ANAC58                                <----------DOF2    <------------------------ANAC81                                   --------->ZAT18   <---------ZAT6            <---------ANAC58                  ---------->DOF2 ------>ARR14(2)        <---------TOE1(2)              --------->ALFIN1   ------->TEIL    <---------AHL20(2) -------ARR14(2)      <----------DOF2           <---------ANAC58      <---------ZAT18    <---------AHL20(2) -------GLK1(2)    ------->TEIL                 <---------ANAC58     --------->ALFIN1<----------DOF2   gatttgtgttactgttttttgcatctttggttcttgtttgctactacaaggcttgatgtgttgaagaaagagtgtgcatctttgggtcttttttatttgc  7537600  Previous    Next  AGI:  At4g12850.1    Description:  far-red impaired responsive family protein / FAR1 family protein. similar to far-red impaired responsive family protein / FAR1 family protein [Arabidopsis thaliana] (TAIR:AT2G43280.1); similar to FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] (GB:ABD33394.2); contains InterPro domain FAR1 (InterPro:IPR004330) Range:  from: 7537066    to: 7538274    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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