Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <------NtERF2                                                   <---------ETT(2)                    --------->ZAT18                <---------ANAC46                               ---                    --------->ZAT14             <-----------RAV1(1)                               ---  --------->HSFB2a(2)                 ----------->HVH21                                         ----- <-----------GT1    <---------ZAT14  ------>ZmHOX2a(1)                                  <---------DAG2 ------>GLK1(1) --------->DAG2       <---------HSFB2a(2)                 ------>ZmHOX2a(1)      <---- -------GLK1(1)---------->DOF2       --------->HSFB2a(2)             --------->ARR14(2) <----------DOF2   atttctcgattctatcgaaaagcgcagtgagattgtctcctcgacggagtctgtcgtcgatgaatgagtcgattcctcttagacgaagtgctttttggag  7201300                     <-----------HVH21                --------->ANAC55(2)                <---------ANAC58                <---------ANAC55(1)           <-----------RAV1(1)           <---------MYB46(3) --------->At4g35610     ----------->HVH21  ---------->DOF2 -------->HVH21 <---------ANAC55(2)                       <---------ZAT2 ------>WRKY38(1) --------->ALFIN1                        --------->At4g35610 ---->At4g35610 <---------ANAC46                          --------->ZAT2   <---------YAB1 ---------->DOF2 -----At4g35610 <---------ANAC58----------->HVH21         <---------At4g35610          <----------ARF1   atgaccggtgaagttgttgcgtgtgtcaaagcctctgaaactgagaaacacatcgaactctgctgaagatggagaagatgattccatgggagaaaagctc  7201400                                                                      --------->ATHB12                                <---------At4g35610                   <---------ICU4                                --------->At4g35610       <------MYB83--------->ATHB51                                <---------ZAT2            <------MYB46(1)                                --------->ZAT2           <---------AtMYB61 <---------ANAC58                        <---------DOF5.7(2)              --------->MYB59   <---------ANAC58                       <---------WRKY12                <---------ANAC46<------------CBF                       <---------WRKY38(1)      <---------ANAC58     --------->ICU4 ------------>CBF      <---------WRKY45         <---------ANAC58     <---------YAB1                -- ------>ZmHOX2a(2)---------->DOF2               <---------ANAC46   --------->YAB1         -----------   tgatccaatttgtccagttttaaagtcaacgatgagctgagaaaaacaaggcttgtggtttggtttctctcataattgcgagaccggacaaaaacaattt  7201500                          ----------->GT1                     <---------------AtSPL8              <---------AHL20(2)              --------->AHL20(2)                   --------->MYB46(3)                      <---------            --------->ANAC55(2)         --------->ANAC46                                  --------->ATHB12            <---------ANAC55(2)         --------->ANAC58                                 --------->ICU4    --------->AHL20(2)    --------->ANAC58  --------->DAG2              --------->AHL20(2)<---------ICU4 ---------->CBF   --------->ATHB12      --------->ANAC58              ----------->GT1    <---------YAB1 ->CBF--------->AHL20(2)  --------->ANAC58 ---------->DOF2          ---------->DOF2   <---------YAB1   atccaatataaaatacttaattagtggcacgaaaaaaaaaacacgaaaagtcaacaaatcgatatgtgagcaaagtaaatttgtgtttttgattattggg  7201600                                                                                                    -                                                                                                   --                                                                                                  <--                                                                                               <-----                                                                                               ------                                                                       --------->WRKY12       <------                                                                       ----------->HVH21      ------>NtERF2                                                    <------NtERF2      --------->WRKY38(1)    <------                                         <------ZmHOX2a(1)            <---------MYB52(1)     --------                                       <---------TOE2(3)        <---------HSFB2a(1)         <--------                            ----------->GT1       --------->ETT(1)   <---------At4g35610    ---------                            --------->MYB52(2)    <---------ANAC46   <-------GAMYB         --------->At4g35610                            <---------MYB46(3)  <-----------HVH21   <---------ANAC46       <---------ATERF1(1)                          <---------MYB52(1)------>ZmHOX2a(2) <---------ARR14(2)           <---------At4g35610                ===================================HOX2a_HOX2a--------->ARR14(2)   <-------TEIL------                ------>ZmHOX2a(1)      <---------TOE1(3)      --------->ARR11(3)<---------ANAC58 ---- ---CBF        --------->TOE2(3)    <---------AHL20(2)        <---------ARR11(3)<---------ANAC58<----   gttttaaaagttttcttcctcattcttcgtttgttaattttaaggatcgatgtcggagaaggaagaacttccgttgacattgacgtccatcggagcggcc  7201700        --------->ICU4      ----------->GT1  ------>NtERF2                       ----------->HVH21 -------->LBD16                    <---------ANAC46 ------->DEAR3(1)                 <---------LBD16 ----NtERF2                     <---------ARR14(2) ----ABI4(2)                    --------->ARR14(2) --->MYB46(3)                  <---------HSFB2a(1) -----HVH21                    --------->HSFC1(2) ---ATERF1(1)    <---------YAB1<---------HSFC1(2) ->RAP2.6(2)     --------->At4g35610--------->LBD16                               --------->AtLEC2 -RAP2.6(2)    --------->YAB1  --------->HSFB2a(1)                        --------->LBD16 >ATERF1(1)<---------YAB1     ----------->ARR10                      <---------WRKY18(1)        <---- --->ATERF1(1)<---------YAB1  <---------HSFB2a(1)                   --------->WRKY12           <----- -->NtERF2 --------->ICU4     --------->HSFB2a(1)                   --------->WRKY38(1) ---------->DOF2 -----ALFIN1--------->YAB1  <------ZmHOX2a(1)                    --------->ICU4<-------TEIL ---------   accgcgactagtgattatcatcagagagtaggaagttccggtgaagggattagtagctcgagtagtgatgttgacccgaggttcatgcagaatagcccca  7201800                                                 ----------->ARR10                                         ----------->RAV1(2)                                        ------>NtERF2                                      --------->DEAR3(2)           --------->ICU4                                   <---------ZAT14          <---------YAB1                                   --------->ZAT14     --------->LBD16         <---------GLK1(1)    --------->ZAT14    --------->MYB52(2)<---------YAB1         --------->GLK1(1)    <---------ZAT14  <---------MYB52(1)--------->YAB1       --------->ATHB12       --------->ZAT18  <--------P<---------ARR14(2)       <---------ICU4  <------NtERF2 --------->SPL7   <---------ANAC46<---------WOX13(1) -----LBD16       --------->YAB1   <---------SPL7--------->MYB59--------->ICU4            <---------YAB1 ----ALFIN1      <---------ATHB12 --------->DEAR3(1) <---------LBD16--------->ATHB12    <------ZmHOX2a(1) >PCF2<---------YAB1 <---------DEAR3(1)--------->DEAR3(1)--------->ARR14(2) ----------->GT1--------->YAB1   cgggtttgatgatttcccaatcgtcgtcgatgtgcaccgtaccgcctgggttagttccggttatgaatgatgattgggatgtgaattgcaggatgataaa  7201900                                                --------->AHL20(2)                                                --------->AHL20(1)                <------------AtMYB77                                                <---------AHL20(2)           --------->HSFB2a(2)                 <---------ANAC58              <---------AHL20(2)            <---------HSFB2a(2)                 <---------ANAC46      ------>ZmHOX2a(2)                 <---------ZAT14             <---------ANAC58         <---------At4g35610                --------->ZAT14             <---------ANAC46        --------->ARR14(2)                  --------->ZAT18            -             <---------ANAC58      ------>ZmHOX2a(1)                <---------ANAC46                <          <----------DOF2      <-----------GT1 --------->AHL20(2)   <---------ANAC58                <       <-----------GT1      ------->TEIL ----------->GT1            <---------ANAC58         <-------  <----------DOF2<---------ANAC58----------------->AGL1         <---------At4g35610 <-----------HVH21   cattctttttttctttcttgtgtgaatatgaattttcctgatctgataaaaaaattgtgttcttgatgctgcttgtgtactggaactgtcatctagcatg  7202000                                                --------->YAB1                                                <---------ICU4       --------->AtMYB61                        -------->HAHB4    --------->REM1(1)      --------->LBD16      <--------ATHB1    <---------ALFIN1     <---------LBD16       --------->ICU4    XXXXXXXXXXXXXXXXXXXXX>MIR856               <---------ATHB51  ----------->RAV1(1)  <---------ARR14(2)--------->At4g35610  =============================RAV    --------->ZAT2                              <------ZmHOX2a(1) -------->At4g35610    --------->ARR14(2)<---------At4g35610                --------->ALFIN1 ------NtERF2   --------->At4g35610   <---------ZAT2                      <---------O2     --------->DAG2 ---------At4g35610<-----------RAV1(2)<---------At4g35610             <-----------HVH21   ---------->DOF2 --AtLEC2    ---------->DOF2          --------->At4g35610           --------->MYB59 ----------->GT1   gcagcaacaccaccaataagctcaggttccggtttatctcagcagcttaataattcttctagttccaagttatgtcaagtggaaggatgtcaaaaaggag  7202100                                          --------->At4g35610                                  --------->ALFIN1                                 <-------GAMYB                         <---------ZAT2               <-------GAMYB   <---------DEAR3(1)                      <---------At4g35610              <---------DEAR3(1) <------NtERF2                         --------->At4g35610          -              <---------MYB46(3) --------->ATERF1(1)          <---------HSFB2a(2)       --------->ZAT18              --------->MYB52(2)<---------MYB46(3)            --------->HSFB2a(2)       <---------ZAT18        <---------At4g35610    <---------ANAC46           <---------WOX13(1) ----------->GT1   ------       ------->TEIL            <---------DREB2C(2)      --------->ATHB12 ----------->HVH21  <--------     <-------TEIL              <---------RAP2.6(2)     <---------YAB1  --------->ZAT2   --------->ZAT14  --------->CCA1(2)  <---------GLK1(1)    <---------At4g35610----------------->AGL1     <---------ZAT14   caagagatgcatctggtcgttgcatttcccatggcggtggacgtagatgccagaaacctgattgccagaagggagctgaaggtaaaacagtgtactgtaa  7202200  Previous    Next  AGI:  At4g12010.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G19510.2); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G45200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPr Range:  from: 7197205    to: 7201387    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g12020.1    Description:  WRKY19 (WRKY DNA-binding protein 19); transcription factor. Identical to Probable WRKY transcription factor 19 (WRKY19) [Arabidopsis Thaliana] (GB:Q9SZ67); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G19500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterP Range:  from: 7201650    to: 7208760    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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