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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                      <---------SPL7
                                                      --------->LBD16
                                                    --------->At4g35610
                                                 <------NtERF2
                                                 ----------->HVH21
                                                 --------->ATERF1(1)
                                                <-----------HVH21
                                                <---------ATERF1(1)
                                                ------>NtERF2
                                                <-----------TGA1
                                               --------->bZIP60(2)
         --------->MYB52(1)                    --------->O2
         ------>NtERF2                         <---------bZIP60(1)
        --------->ANAC46                       --------->bZIP60(1)
        --------->DEAR3(1)                    --------->RAP2.3(1)
        ----------->HVH21                    ------>NtERF2
  --------->KAN4(2)                          <---------ATERF1(1)
<---------ARR11(3)                           --------->LBD16          <---------MYB52(1)
--------->AHL20(1)                          <---------DEAR3(1)      <---------ANAC46
--------->ARR11(3)                          --------->ANAC46  --------->DAG2                    ----
<---------AHL20(1)                         <---------LBD16   ---------->DOF2                    ----
--->TOE1(3)                          <---------DAG2 <---------At4g35610            --------->ANAC58
--->TOE2(3)                          <----------DOF2<---------LBD16<------NtERF2   --------->ANAC58
 
aaaaatattccccgacggagaaaacccattaacaacatcacttttctccggcgtcaccggaccaaaaagcgccgttttcaaaagactcgcataagaacca  7163000
                                                                                <---------KAN4(2)
                                                                     <---------AGP1
                                                                     --------->AGP1<-----------GT1
                                                                     --------->ARR11(3)
                                                                     <---------ARR11(3)
                                                                     <---------ARR14(2)
                                                      --------->ANAC58 ------>ZmHOX2a(2)
       <----------DOF2                           --------->DAG2      --------->ARR14(2) ------>MYB83
<---------ALFIN1         <---------DEAR3(1)     ---------->DOF2      <-----------ARR10  --------->ARR14(2)
-->MYB83            <---------YAB1     ----------------->AGL1       <---------CCA1(2)   <---------ARR14(2)
-->MYB46(1)     <----------DOF2    --------->At4g35610--------->ANAC58<------ZmHOX2a(2) ------>MYB46(1)
 
gccccatcttctttcccatctttcttattcggcgaagaagatgccaaatcgaaaagcgcgaaattggaaccagatctacttggaataaacctatctgagt  7163100
                       <--------ATHB1
                       -------->HAHB4
                       --------->ATHB12                                                           --
                       <---------ICU4                                                             --
                      --------->ICU4                                                              <-
                      <---------YAB1                                                              --
                    <---------ICU4                                      <---------TOE1(2)         <-
                    --------->YAB1                                      --------->SPL7          <---
                   --------->ICU4                <---------ANAC58  <-----------HVH21           <----
                 --------->YAB1                  --------->ANAC55(2)  ----------->HVH21      -------
                <---------ZAT6                   <---------ANAC55(2)  <---------SPL7   --------->ALFIN1
              ----------->GT1                    <---------ANAC58 --------->DEAR3(1)<---------DEAR3(1)
           <------ZmHOX2a(1)             ----------->GT1    ----------->HVH21<-------TEIL    <------
 
aaataggtttcgaaggagagtgataatgattcgaatcgattaaacggttgattcgtgactcgagtgacaccgtcggacgattcatcgacggtggaagatt  7163200
      --------->At4g35610
     --------->ARR14(2)
     <---------ARR14(2)
     <-----------ARR10
     --------->GLK1(2)                                                                             -
    <---------GLK1(2)                                                                       --------
--------->RAV1(2)                                                                          <--------
------->At4g35610                                                                          <--------
--------ZAT2                                                                               ---------
------->ZAT2                                                                       --------->ARR14(2)
--------At4g35610                                                                  <---------ARR14(2)
--------RAV1(2)                                                                    <---------GLK1(2)
---TEIL                   <---------MYB46(3)                                  ------>ZmHOX2a(1)  <--
-->ARR14(2)         <---------DEAR3(1)                                  <---------ANAC58   ---------
---ARR14(2)     <<<<<<<<<TBF1    <-------TEIL                           <---------ANAC58   ---------
 
cagctgagaatctgacttcttcttcggtgttgttgattcatcttcttccatgtttgatttcaatctcttactgtttcgttcctccagatttgaagatttg  7163300
     --------->DAG2
    ---------->DOF2
---------->GT1        <---------MYB52(1)
->CCA1(2)       <----------DOF2                                 --------->LBD16
-ARR14(2)      ------>ZmHOX2a(2)                               --------->LBD16
-ARR11(3)     <------ZmHOX2a(2)                               --------->LBD16
>ARR14(2)    --------->ARR11(3)                               <---------LBD16
-----GAMYB   --------->AGP1                           <-----------GT1                          <----
>ARR11(3)    <---------ARR11(3)            <---------TOE2(3) <---------LBD16<---------ANAC46   -----
>ARR11(1)  ----------->ARR10              ---------->DOF2<----------DOF2   *TSS            <--------
 
ggttgaaaaaagttgagatctttctgtttttttttgtttcttcactaaagttttttttttctttcccgggaaaattgttgagggaaacagaaaatgtcaa  7163400
                                           <---------YAB1
                                    <------MYB83
                                    <------MYB46(1)
                                  <--------P       <-------TEIL                  <---------ANAC58
       ----------->GT1         <---------AtMYB61  --------->CCA1(2)        <------------CBF
<------------CBF             <-----------RAV1(1) <---------ARR14(2)       --------->ATHB12
-----ANAC55(2)               --------->ALFIN1 <--------P                 <---------AHL20(2)
------>GT1              <------ZmHOX2a(2)  <---------TOE2(3) <------------CBF    <---------ANAC58
---HVH21      --------->MYB52(1) <---------SPL7  --------->ARR14(2)      <---------YAB1   ----------
 
gtgaattggtgcgaaaataagggagcgatcatgtgtggtagggtttatggtagatacactgtcttattggactgttttaattgggcttgaaacttgttat  7163500
              <---------YAB1     --------->AHL20(2)       <-----------GT1
        --------->AHL20(1)       <---------AHL20(2)  <---------AHL20(2)
        <---------AHL20(2)      --------->AHL20(2)   --------->AHL20(2)                       <-----
        <---------AHL20(1)      <---------AHL20(2)   --------->AHL20(1)                       ------
        --------->AHL20(2)  <---------AHL20(2)       <---------AHL20(1)                     <-------
    <---------ATHB51        --------->AHL20(2)      --------->AHL20(2)                    <---------DOF5.7(2)
    <---------ATHB12        --------->AHL20(1) ----------->GT1                           <---------ZAT18
->GT1--------->YAB1  <-------GAMYB         <------ZmHOX2a(1)                       --------->TOE2(3)
 
aagcccaataataaattatgttttcgttgaattaattaaattcttaggagttgtattaaattaacatggtcatttcagtgaaatttcattagttcacgtt  7163600
                       ------>ZmHOX2a(2)
                     <---------AGP1
                     <---------ARR14(2)
                     --------->ARR14(2)                    ----------->GT1
          <----------DOF2                             --------->CCA1(2)
<----------DOF2--------->ATHB12      --------->ATHB12--------->ARR11(3)                        <----
----MYB52(1)  <---------YAB1        <---------YAB1   <---------ARR14(2)                 <----------DOF2
--->ALFIN1<---------DAG2       <---------YAB1        <---------ARR11(3)               ---------->ID1
--O2    ------->TEIL --------->ARR11(3)      <----------DOF2  <---------ARR14(2)     <-----------GT1
 
gggctttaatggactttttcattggatctggattatgttttcattgggcttttgaagatatagagtatatcgaaatttttgggttttttttctttttttt  7163700
                                     -------->HAHB4                                <----------DOF2
                         <---------AHL20(2)                                       <---------DAG2
                       <---------------AGL15     <---------WRKY38(1)              --------------->AGL15
                       ===========================================================================MADS_MADS
                    <---------AHL20(2)    <---------TOE1(3)                       <---------------AGL15
                 <---------ARR14(2)  --------->ATHB12                          <-----------GT1
                 --------->ARR14(2) --------->ICU4                          --------->YAB1
   <-----------GT1  --------->AHL20(2)    <---------TOE2(3)                 <---------ICU4
-------GT1  --------->MYB52(1)      <---------ATHB12 ---------->DOF2       --------->ICU4  ---------
 
tctatatttcgatacaaacggattttattttttgggtaaatgattaaggtagtcaacaaagagggtgcaagttttaaaattatgaccttttttagcataa  7163800
                                                         <---------ANAC58
                                                         <---------ANAC58
                                                  <---------YAB1
                                                -------->HAHB4
                                                --------->YAB1                             <--------
              <---------ARR14(2)               <---------YAB1                          <---------ANAC58
              <---------ZAT14              --------->ARR11(3)                          <---------ANAC58
>YAB1      <---------ANAC46     --------->YAB1 --------->ICU4              ---------->DOF2 ---------
 
ttttaaacaaatttgtgtatacagttatagacttatagtaattgtagataatgataatttgcttagcttcttagcaaaaaaagactatttgcttagctgt  7163900
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AGI:  At4g11920.1   
Description:  WD-40 repeat family protein. similar to signal transducer [Arabidopsis thaliana] (TAIR:AT4G22910.1); similar to cell cycle switch protein [Medicago sativa subsp. x varia] (GB:AAD22612.1); similar to cell cycle switch protein CCS52A [Pisum sativum] (GB:AAY58272.1); similar to WD-repeat cell cycle regulatory protein [Medicago truncatula] (GB:AAF37386.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain Cdc20/Fizzy (InterPro:IPR000002)
Range:  from: 7160270    to: 7163376    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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