Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ICU4 ---ANAC46                        --------->YAB1 ---bZIP60(1)                    <---------AHL20(2)                                      <---------ICU4 ---ANAC55(2)                   --------->AHL20(1)                                       --------->YAB1 ---->GT1                       <---------AHL20(1)                             <-------TEIL -->ANAC55(2)                   --------->AHL20(2)            <---------MYB46(3)   ------>ZmHOX2a(2) --->STF1                      --------->YAB1                 <-----------RAV1(1)  ----------->GT1 -TGA2(2) <-----------GT1  --------->AHL20(2)      <-------TEIL               <--------P--------->ICU4 ->TGA1<---------ZAT6      <---------AHL20(2) --------->AHL20(2) <---------MYB46(3)--------->YAB1   aaattggtagtattaccctacttctaagtttaaatataatcacttcgtttatatacatctacatttgttgttgaaaacaggttgatcgtaataatgtcta  7142700                                                                           <---------YAB1                                                                         -------->HAHB4                                                                         <---------ICU4                                      --------->ANAC58                   --------->YAB1                                     ------>NtERF2                      --------->ICU4                                  ------->GAMYB                       <---------ICU4                            --------->ANAC46                          --------->YAB1                        <---------AHL20(2)                           --------->ICU4      <---------GLK1(2)                        --------->AHL20(2)                           <---------AHL20(2)<---------ARR11(3)           <---------AHL20(2)    --------->ANAC58                    --------->AHL20(2)--------->ARR11(3)           <---------------AGL15 --------->ANAC58                    <---------ATHB51  --------->AHL20(1)           --------->AHL20(2)    --------->bZIP60(2)                <---------AHL20(1) <---------AHL20(1)     <<<<<<<<<GATA-1    --------->YAB1--------->ANAC58           --------->AHL20(1)    <---------AHL20(2) <---------DAG2        --------->ICU4<---------LBD16             <---------AHL20(2)    --------->AHL20(2) <----------DOF2  ----------->GT1--------->ANAC46                --------->AHL20(2)<------ZmHOX2a(1)   ttactttatctatatatatagagtaattatatgcaacgccacggatgacaaaatttcatataacaaataaaataattatgacataggaatatattctcca  7142800                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                  --------->ARR11(3)            --------->CCA1(2)                                  <---------------AGL15                        <---------ARR14(2)          ---------->ID1          --------------->AGL15                        --------->ARR11(1)     <---------ICU4              ----------------->AGL2                     <---------TOE2(3)    <---------YAB1               ====================================================================  --------->YAB1                 ----------------->AG                      <---------DOF5.7(2)  <---------AHL20(1)      --------->AHL20(2)      <---------ARR11(3)       --------->MYB52(1)  --------->AHL20(2)      <---------AHL20(2)      <---------ARR14(2)   --------->YAB1        --------  <---------ICU4         <---------AHL20(2)      --------->GLK1(1)     <--------HAHB4      --------->TOE2(3)  --------->ATHB51       --------->AHL20(2)      <---------CCA1(2)    <---------YAB1 ------->TEIL  <--------ATHB1<---------YAB1   ----------------->AGL1       <---------DAG2<---------TOE1(3)<------- <---------ATHB51--------->AHL20(2) ---------->DOF2           <----------DOF2  --------->ARR14(2) --------->ICU4--------->AHL20(2)----------------->AGL3    --------->ICU4  <-----------GT1 <--------- <---------ATHB12--------->YAB1<-----------GT1   <---------GLK1(1)    <---------AHL20(2) ------->TEIL   ccaataatttttgcccttataatataaaaaaatttaccaaaagaagaatggatatcttgtaatgctttttctataattaacgatacgcatgtactttaat  7142900                           --------->YAB1                          <---------YAB1    <----------DOF2     --------------->AGL15                     --------->AHL20(1)                < =======================================MADS_MADS                 <---------AHL20(1)               -- ->AHL20(2)             <---------------AGL15                --------->AHL20(2)                   <-- --AHL20(2)     <---------YAB1                --------->AHL20(2) --------->AHL20(2)             <---- -DOF2        <------ZmHOX2a(1)         ----------->GT1---------->DOF2                         ------   taagcactttggtctaggattatagactattataggtatagagagaaaaaaaatggctaaagataaaatatataaaaccccaaacacagccaaactattt  7143000                                           --------->ANAC55(2)                                           <---------ANAC55(1)                                  <---------AHL20(2)                                  --------->AHL20(2)    <------------CBF <---------YAB1            <---------AHL20(1)          --------->ATHB12          <---------TOE1(3) -----------GT1            --------->AHL20(1)  <----------DOF2                   <---------TOE2(3) ------->YAB1           --------->YAB1     <---------ANAC55(2)   ------>ZmHOX2a(1)              <---- -------YAB1            --------->AHL20(2) <---------ANAC58    <---------At4g35610  --------->GLK1(1) -----AHL20(2)       --------->YAB1        <---------ANAC58    ----------->RAV1(2)  <---------GLK1(1) --->AHL20(2)--------->CCA1(2)<---------AHL20(2)      <---------YAB1      --------->AHL20(2) <-------   attatcagttcatggatatagaagaataatatataaaaaattcttacgtcttttttgttattggctcctgatttcataaatttagggtttccaagaattc  7143100                                                                                           <-------TEIL         *TSS                                                                       ---------->DOF2       <---------ATHB12                                                           --------->YAB1   ------------>CBF                                                              <---------ATHB12 -------GT1                               <-----------GT1                      --------->WOX13(1) --GLK1(1)    ------>NtERF2           <----------DOF2                        <---------ATHB12   tccatttcaatcttgccgactctttccaaagactctctctctttctactctctccctcatcgttctcttagagacacaaatcaatcaaaagcatacataa  7143200                                                     ------>ZmHOX2a(2)                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                                <---------WOX13(1)                                              --------->ATHB12                                             <---------YAB1  <---------------AGL15       ----------->GT1               =======================HOX2a_HOX2a      --------->ALFIN1     <-- ---------->DOF2  <-----------GT1    ------>ZmHOX2a(1)       --------------->AGL15               <---   aaacaaagggggtaatcttttttctcaactatatatgtcctcaatttctgattgatctcttctctatttttagtagaaggtggagattgttcttgttctc  7143300                                                                        --------->ATHB12                                                                        -------->HAHB4                                                 <---------AHL20(2)     <---------ICU4                                                 --------->AHL20(2)     --------->ATHB51                                               <---------AHL20(2)   <---------AHL20(2)                                               --------->AHL20(2)  <---------AHL20(2)                                             <---------AHL20(2)    --------->AHL20(2)                                             --------->AHL20(2)<---------YAB1                                           --------->AHL20(2)  <---------AHL20(2)                                           <---------AHL20(2)  --------->AHL20(2)                                         <---------AHL20(2)--------->AHL20(2)                                         --------->AHL20(2)<---------AHL20(2)                                       --------->AHL20(2)<---------AHL20(2)                                       <---------AHL20(2)--------->AHL20(2)                                     --------->AHL20(2)<---------AHL20(2)                                     <---------AHL20(2)--------->AHL20(2)                                 <---------AHL20(2)<---------AHL20(2)   <--------ATHB1              -   <---------At4g35610           --------->AHL20(2)--------->AHL20(2)  --------->AHL20(2)    ------>ZmHOX2a(1) -------YAB1      --------->ANAC58 <---------AHL20(2)<---------AHL20(2)<---------ATHB51     <-------- ------TOE1(2)    --------->ANAC58 --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)<-----------GT1   atgtttgctgttcttgtagtaagaaatatgtctatatatatatatatatatatatatatatatatataattaaataattgctcccatctaatttcctctc  7143400                                       --------->ARR11(3)                      <---------AHL20(2)                      <---------AHL20(1)                                                   --------->AHL20(2)                      --------->AHL20(1)                                                   --------->AHL20(1)           --------->ZAT14             <---------AHL20(1)                          <---------ZAT6           <---------ZAT14            --------->RVE1(1)                            ----------->GT1          <---------DAG2              --------->CCA1(1)                           <---------TOE2(3)          <----------DOF2          <---------AHL20(2)                             <---------TOE1(3)       <-----------GT1--------->AHL20(2)           <-----------------------TaNAC69(2)     <---------AHL20(2)       <---------AHL20(2)         --------->AHL20(2)   ----------->GT1   <---------MYB46(3)<---------AHL20(2) -------->YAB1       --------->AHL20(2)--------->AHL20(1)             <-----------RAV1(1) --------->AHL20(2) -------AGL15        <---------AHL20(2)<---------ARR11(3)     --------->YAB1 --------->ATHB12   atggataatttactttactgaaattaaattttttcatttaatatcttatgggaagagtggaaaatcaaaatactgttgttgattagggttaattaaatta  7143500                                                       --------->ANAC58                                                       --------->ANAC58                                                   --------->ANAC58                                              ------->GAMYB                                           --------->MYB52(1)                                        --------->ANAC58                                        --------->ANAC46             ---------->DOF2            --------->ANAC58     <----------DOF2                ---------         <---------ANAC46       <---------ARR14(2) --------->ANAC58               ------->TEIL   <---        --------->ALFIN1       <------ZmHOX2a(1)--------->ZAT2       ---------->DOF2<----------DOF2   gaagaatggtgaggggaaagacagagatgaagaggatagagaacgcaacgagcaggcaagtgactttctcaaaaagaagaaatggacttttgaagaaagc  7143600  Previous    Next  AGI:  At4g11880.1    Description:  AGL14 (AGAMOUS-LIKE 14); DNA binding / transcription factor. Identical to Agamous-like MADS-box protein AGL14 (AGL14) [Arabidopsis Thaliana] (GB:Q38838;GB:Q9T056); similar to AGL19 (AGAMOUS-LIKE 19), transcription factor [Arabidopsis thaliana] (TAIR:AT4G22950.1); similar to MADS-box protein PTM5 [Populus tremuloides] (GB:AAP46287.1); similar to MADS-box protein [Vitis vinifera] (GB:ABF56527.1); similar to MADS box transcription factor 5 [Populus tomentosa] (GB:ABG34340.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 7143109    to: 7147216    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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