Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <----------DOF2 --------ANAC58                                          <---------HSFB2a(2) --------ANAC58                                          --------->HSFB2a(2) --------ANAC46                                --------->ARR14(2)          ------>ZmHOX2a(1) ------>HVH21                                  ------->TEIL  <---------ARR14(2) ------>TGA1          --------->ZAT6           <---------ARR14(2)          --------->LBD16 ---ANAC58   <---------At4g35610              <---------CCA1(2)          ----------->RAV1(2) ---ANAC58   --------->At4g35610  <----------DOF2      ------>ZmHOX2a(1) <---------LBD16   gacgttcttttttttagctccataacacaacgctgtctttgagtaaatgtatctgtcctctcgaattctgcaatttcctgaaactgggcaaattgaaatt  7021400               --------->At4g35610               <---------At4g35610     ------>ZmHOX2a(1)            <------MYB46(1)             <-----------HVH21    --------->TOE2(3)             <------MYB83   ------>ZmHOX2a(1)                           <-------   --------->YAB1                <---------TOE2(3)   <----------DOF2                  --------->ZAT14 --------->ARR14(2)              --------->MYB59 <----------DOF2                      <---------ZAT18   cccaatcctaaaccctaagctcaaatttgagaaattaggtttgttttcatcctttctttgtctcagtcacttagtttttgggttttagtagactcctttg  7021500                                                            <----------DOF2                 ------------>CBF                  --------->At4g35610                              -              <------------CBF                     <---------At4g35610                           <---     <-----------GT1                              <-----------RAV1(1)                          ------ ---DOF2     <---------ICU4           <----------DOF2<---------ANAC46                 --------->TOE2(3)   tattttttaacccaaaaattgcaatgtcaaaagtttcagtcttttgcaacttctgctgtgttcttttgtgatttgagacagaagagaaacttaatttgtc  7021600                                                                                  --------->CCA1(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR11(3)                                                                                 --------->ARR14(2)                                                                                <------ZmHOX2a(1)                                            --------->DAG2                    <---------TOE2(3)                        --------->ICU4     ---------->DOF2                 <---------WOX13(1) --------->DOF2    ----------->GT1<------------CBF                        <------------CBF -------DOF2   --------->MYB59  <---------AHL20(1)                       --------->ATHB12 ---->ID1      <---------TOE2(3)--------->ARR11(3)                      <---------YAB1           <---   tttaaagctaacatttttaggtagcaaaaattagtatattgagcataaagttaacaaatttgaagttatttaagatgattgaggatatggttttctattc  7021700                              --------->HSFC1(2)                                             --------                              <---------HSFC1(2)                                             <-------                             ------->TEIL              <---------HSFB2a(2)                   --------                       --------->ICU4                  --------->HSFB2a(2)             --------->At4g35610                    <---------ZAT6                 <---------DAG2--------->ANAC58      <---------At4g35610       <------ZmHOX2a(1)<---------ICU4          <-----------GT1  --------->ANAC58   <---------At4g35610 ------YAB1       ----------->GT1  <----------DOF2 <----------DOF2                 <-----------RAV1(1)   tgataagtaggaagttgatgaagtgataatgaagcttctttgaaatgtttttactttttagaaatggaagcaaatagagagaagtatgctgctgatatat  7021800                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                            <---------GLK1(1)                             <---------HSFC1(2)                                 --------->ARR14(2)                                       --------->HSFC1(2)                              --------->RAP2.6(2)          ----------->RAV1(2)     --------->LBD16     ---------->DOF2          ----------->GT1     <---------MYB52(1)              --------->HSFB2a(2) ->ARR11(3)                   <---------ANAC46 <---------LBD16                    --------->ANAC46 --AHL20(1)      <---------WRKY18(1) <-------TEIL--------->LBD16                  <---------HSFB2a(2) ->AHL20(1)     ----------->HVH21<---------ARR14(2)        --------->At4g35610   <---------LBD16  <--   tgtccataaaagaagctcatgaccgtattaagccgtatatacatagaactccggtgttaacatctgaatcgttgaattcaatctccggaagaagcttgtt  7021900                                                                        --------->GLK1(2)                                                                <---------ANAC58                                                                <---------ANAC58                                                                <---------ANAC46                                                               --------->ATHB12                                                             <---------WOX13(1)                                                           --------->ATHB12                                                       --------->ATHB12--------->ARR14(2)                                                   --------->ICU4 --------->ALFIN1           <---------ZAT18                  --------------------->WRI1 <---------GLK1(2)           --------->ZAT18           <---------ZAT14--------->MYB52(1) <---------ARR14(2)        <---------ANAC58           <---------------AtSPL8<--------P  ----------->ARR10        <---------ANAC58 <XXXXXXXXXXXXXXXXXXXXMIR398A  <---------MYB46(3)                           < --------DOF2      ---------->DOF2 --------------->AtSPL8<---------WOX13(1)                         -   ctttaagtgtgagtgccttcagaaagggtgagacttgagagtacttcttagtactaatggttgattgagtggagattctctcattgttctcagtattgaa  7022000                                                          <---------ANAC58                                                         --------->ZAT2                                                     --------->ALFIN1                                                    --------->LBD16                                                    <---------LBD16                                --            <---------DAG2                         <---------ANAC58                             -----            <----------DOF2              <----------DOF2 <---------At4g35610                ---------         <-----------GT1               <---------At4g35610<---------ANAC58                  ---------    ------>ZmHOX2a(2)              --------->ALFIN1<---------ANAC55(1)              --------->At4g35610 ---------ETT(2)                --------->DAG2     <---------ANAC46                 <---------At4g35610 -------->ETT(2)               ---------->DOF2     <---------ANAC58   <---------MYB52(1)    ---------   tgtcgatcgttttacttttctgtttattgtggaaaaagtggagctttcaaattccgtggagcttgcaatgctgttttgtctcttgatgctgaacaagcag  7022100                                                                                               <-----                                                                                             --------       ----------->GT1                                                                      <--------       <---------REM1(1)                                                                    --------- -------->DOF2    <---------ZAT2                                                       --------->ANAC55(2) ---->At4g35610   --------->ZAT2 <---------------AGL15                           <---------ANAC46 >ANAC46          <---------At4g35610                          <-----------GT1   <----------DOF2 >ANAC58        --------->ANAC46----------------->AGL1<----------DOF2           ----------------->AGL1 >ANAC58      --------->ANAC46<-----------GT1     <---------TOE2(3)        --------->ARR14(2)--------   ccaaaggagttgtaacacacagcaggtttttgtttccatactgtgaaagattaatgctttattgtttaccgatttcatttctgccttataggtaatgatg  7022200                                                                                                  <--                                                                                           --------->LBD16 <---------ZAT6                                                                           <---------LBD16 ----------->GT1                                                                         <-----------RAV1(2) ----YAB1                                                                <----------DOF2<-------TEIL- >HAHB4                     <---------TOE2(3)                 --------->ZAT2           --------->GLK1(2) -ATHB12                 ------>ZmHOX2a(1)                    <---------At4g35610      --------->CCA1(2) >ICU4  <---------ICU4  --------->TOE2(3)                     --------->At4g35610   --------->ICU4--- ->YAB1 --------->YAB1  --------->ANAC55(2)  <---------YAB1   <---------ZAT2    <------NtERF2    ----   ctagagttaatagtgactgaatagttccttaatgttgaatttctattaccagtggaaaccatgctgctgcattgtctttggctgcaaagattcagggaat  7022300  Previous    Next  AGI:  At4g11630.1    Description:  ribosomal protein L19 family protein. similar to ribosomal protein L19 family protein [Arabidopsis thaliana] (TAIR:AT5G11750.1); similar to putative L19 ribosomal protein [Solanum lycopersicum] (GB:ABC26877.1); contains InterPro domain Ribosomal protein L19; (InterPro:IPR001857) Range:  from: 7019694    to: 7021342    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g11640.1    Description:  ATSR (ARABIDOPSIS THALIANA SIGNAL-RESPONSIVE); serine racemase. similar to OMR1 (L-O-METHYLTHREONINE RESISTANT 1), L-threonine ammonia-lyase [Arabidopsis thaliana] (TAIR:AT3G10050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62797.1); contains InterPro domain Serine/threonine dehydratase, pyridoxal-phosphate-binding site; (InterPro:IPR000634); contains InterPro domain Pyridoxal phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926) Range:  from: 7021764    to: 7023312    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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