Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------At4g35610                                                                                           <---------ZAT14                                                                                           <---------ZAT18                                                                                           --------->ZAT14                                                                                           --------->At4g35610                                                                                           --------->ABI4(2)                                                                                          --------->ALFIN1                                                                                    --------->ARR14(2)                                                       --------->At5g28300          <---------ARR14(2)                    <---------At4g35610               ----------->GT1          --------->MYB52(1)                    --------->At4g35610            <---------ARR14(2)         <---------ALFIN1                <------MYB83                       --------->ARR14(2)         --------->AtMYB61       <------MYB46(1)                             --------->GLK1(2)         <---------ABI4(2)       <------MYB83<---------DEAR3(1)           ------->GAMYB                --------->MYB46(3)      --------->MYB59                          ----------------->AG          <---------MYB55(2) --------->LBD16<---------MYB46(3)            <-----------------AGL1       --------->ARR14(2) ----------------AGL1        --------->DAG2   <-----------------AG         <---------ARR14(2) --ARR14(2)     <------MYB46(1)              <-----------GT1          <---------ANAC46  --------->LBD16 ->ARR14(2)   <--------P    ---------->DOF2  --------->MYB52(1)       --------->ALFIN1<---------LBD16   atcccgattaggtctagttggtcgctgagataaagctcgagggagattaaccgaatcggtaatttcgcctctgtgtggaaccaccggttccggtgcagac  6845200                                                                <------NtERF2                                                                <---------MYB52(1)                                                               <-----------HVH21                                                               <---------RAP2.6(3)                                                               ------>NtERF2                                        --------->At4g35610    <-----------TGA1                                        <---------At4g35610   --------->TGA1a                                      ------>ZmHOX2a(2)       --------->RAP2.3(2)                                    --------->ARR14(2)        --------->ATERF1(2)                             ------>ZmHOX2a(2)                <---------ATERF1(2)                            <------ZmHOX2a(2)                 --------->RAP2.3(3)                           <---------ARR11(3)                 --------->DEAR3(1)                           --------->AGP1                    <------NtERF2                           --------->ARR11(3)                --------->RRTF1(1)                     <---------ANAC46<---------At4g35610     --------->ERF1                   ------>NtERF2 <---------HSFB2a(2)         --------->RAP2.3(1)                  --------->ANAC58  <---------ARR11(3)      --------->LBD16                  --------->ANAC46  <---------ARR14(2)      ------>NtERF2                  --------->ANAC58  <---------AGP1         --------->DEAR3(1)                <---------ALFIN1<---------LBD16            <---------ALFIN1               --------->MYB46(3)--------->HSFB2a(2)       --------->ANAC46             <---------ARR14(2)----------->RAV1(2)        <---------LBD16     ------>NtERF2             --------->ARR14(2)====================RAV    --------->MYB46(3) --------->O2          --------->TOE2(3)--------->ARR14(2)             --------->ATERF1(1)<---------O2          --------->TOE1(3)<---------ARR14(2)        <---------ANAC58        --------->DEAR3(1)          --------->ANAC46 --------->ARR14(3)        <---------ANAC58      ------>NtERF2    =========          ------->GAMYB<---------MYB52(1)    <----------DOF2<---------ATERF1(1)        <---------ALFIN1        <---------At5g28300<---------ARR14(3)===========================bZIP_DOF ------>NtERF2       --------->MYB52(1)----------->ARR10   --------------------->WRI1   --------->DEAR3(1)------>ZmHOX2a(1)       <-----------GT1<-----------HVH21<-----------RAV1(1)<------NtERF2   ----------->HVH21--------->TOE2(3)     <---------KAN4(2)--------->LBD16<---------GLK1(1)   <---------ATERF1(1) ----------->HVH21   cgagacgaataaccgtaaccacgccgtgagatcttctggatctgctgctttgagttcgtccccgccgtcagtctctccgacgacgcgctccatcctaagc  6845300                                                                               --------->MYB52(1)                                                                              ----------->HVH21                                                                             <---------MYB52(1)                                                                            --------->LBD16                                                                           --------->HSFB2a(2)                                                                           <---------HSFB2a(2)                           --------->ANAC46                               <---------LBD16                          --------->LBD16                           <-----------------AGL1                      --------->ARR14(2)                            <------NtERF2                      --------->GLK1(2)              --------->At4g35610--------->ARR14(2)                      <---------ARR14(2)        ------>ZmHOX2a(2)   ----------------->AGL1                     <---------GLK1(2)          --------------->AtSPL3  <---------ARR14(2)                   --------->LBD16              --------------->AtSPL8<---------DEAR3(2)                 <---------LBD16              <---------AGP1       --------->ABI4(2)                ------->TEIL                  <---------ARR14(2)   ------------>AtMYB77             ------>ZmHOX2a(1)                --------->ARR14(2)   ------>NtERF2             ==================================HOX2a_HOX2a        <---------DEAR3(1)             ----           ----------->RAV1(2)          ------>ZmHOX2a(2)         --------->ALFIN1------->GAMYB  <---           ------>ZmHOX2a(2)          <---------ARR11(3)     --------->MYB52(1)<---------DOF5.7(2)  < =================HOX2a_HOX2a         --------->ARR11(3)    --------->RVE1(1)--------->DOF5.7(2)<----   taagcgaccttgatcctgaaccggaatccgagcaagaggtgatctctagatcggtacctgaaatatcggtgccggttccggtaacggagtcgatgtttat  6845400                                              <------NtERF2                                             --------->LBD16                                    <---------ARR11(3)       <------ZmHOX2a(1)                                    --------->ARR11(3)     --------->ALFIN1                                   --------->GLK1(1)   <------ZmHOX2a(1)                              <---------HSFC1(1)     --------->ALFIN1                           -----                              <---------HSFB2a(2)   xxxxxxxxxxxxxxxx>smallRNA(se3)         <------ZmHOX2a(1)      ------>NtERF2           --------->HSFB2a(2)<------ZmHOX2a(1)                        --------->ICU4     --------->DEAR3(1)       --------->HSFC1(1) xxxxxxxxxxxxxxxx>smallRNA(se3)          <---------TOE2(3)  --------->ANAC46            --------------------->WRI1--------->ALFIN1               <--------P ----->YAB1             <-----------GT1     --------->DEAR3(1)--------->ALFIN1     <---------ANAC46 ------ICU4   <---------ARR14(2)   <---------GLK1(1)<------ZmHOX2a(1)              <---------ANAC58 -----------GT1      <---------MYB46(3)    <---------LBD16<------ZmHOX2a(1)   <-----------RAV1(1) -----YAB1    --------->GLK1(1)  <------ZmHOX2a(1)--------->ALFIN1--------->ALFIN1 <---------ANAC58   tattacgccgcttgggaattcgattgttacttctaggagctcttcgccggaggaggaggaggaggagggtgagggtgagtatgttgctggtaaggatgga  6845500                                               --------------------->WRI1                                               <-------GAMYB                                              ------>ZmHOX2a(2)<------NtERF2                  <---------LBD16             <---------MYB46(3)                 ------>NtERF2                --------->MYB52(2)                 --------->LBD16          --------->MYB46(3) --------->LBD16          --------->ARR14(2)              <---------MYB52(2) --------->RAP2.3(2)          <---------ARR14(2)            --------->MYB52(1)   --------->RAP2.6(2)     <---------ANAC46              <---------ATERF1(1)      <------NtERF2     <---------ANAC58   <---------At4g35610  <------ZmHOX2a(2)--------->LBD16     <---------ANAC58<------NtERF2 ------>NtERF2            <---------LBD16    <---------MYB46(3)  --------->At4g35610------->GAMYB   --------->LBD16                       <--- <----------DOF2<---------DEAR3(1) --------->GLK1(1)       ------>NtERF2                <-----------RAV1(1) ----->DOF2    <---------LBD16    --------->ARR14(2)     <---------LBD16               *TSS  <-------   aagctttgggtgaattctccggcggaagctaaatcggagccccaacgatcgttgtgagtcccgccggaaaatgacattgacattttgaatttgttgggag  6845600        --------->ANAC58                                                              ---------->DOF2        --------->ANAC58        <---------ICU4                  <---------AHL20(2)  <---------ATHB12  <------ZmHOX2a(1)            --------->AHL20(2)              --------->AHL20(2)--------->ICU4 ---ZmHOX2a(1)       --------->At4g35610                    --------->YAB1       <---------------AGL15 --ANAC46            <---------At4g35610                   <---------YAB1<----------DOF2     --------   gagaggagagaagccaaggagggagaagactgaataaatacagtttttgaattttgtgtttattataaaatttgtcttttgtactaatcaaaggaacgac  6845700                                                                                               ------                                               --------->HSFB2a(2)                    --------->bZIP60(1)                                --------->YAB1 <---------HSFB2a(2)                    --------->ANAC58                    ----------->GT1      <------MYB83               <-----------GT1   <---------bZIP60(1)                    --------->ANAC58     <------MYB46(1)          --------->YAB1      --------->ANAC46       <-----------GT1        --------->AHL20(2)              <---------AHL20(2)      --------->ANAC58  <------ZmHOX2a(1) --------->ANAC58    --------->MYB59       --------->AHL20(2)    <-----------GT1-- ->MYB46(3)---------->DOF2    <---------AHL20(2)        ----------->GT1      <-----------GT1   <-----   cagaggaaattaccaaagcagaacgaaaatataaaaataagtttggtttctaaaaatacggttttaaattatactatatttacgagttacgacacaaaaa  6845800                                          --------->ANAC46                                      --------->YAB1                                    <---------AHL20(2)                                   --------->YAB1                                  --------->AHL20(2)                                  --------->AHL20(2)                               <---------AHL20(2)                                  <---------AHL20(2)                              --------->AHL20(2)                            <---------ZAT18                                       <---------AHL20(2)                            <-------TEIL<---------YAB1                    <---------AHL20(2)                        --------------->AtSPL3                        <---------AHL20(2)--------->AHL20(2)                        --------->MYB59 <-----------GT1              <---------AHL20(1)--------->AHL20(1)        <---------AHL20(2)  --------->ZAT18<---------MYB59           --------->AHL20(1)<---------AHL20(1) <-----------GT1        <---------TOE2(3) --------->ANAC55(2)     --------->AHL20(2)   --------->AHL20(2) --->AHL20(2)           <---------------AtSPL8         <---------MYB46(3) --------->AHL20(2) ------->YAB1           --------------->AtSPL8       <-------GAMYB<---------AHL20(2)   <---------AHL20(2) ----AHL20(2)   <---------AtLEC2<----------DOF2     <-----------RAV1(1) <---------AHL20(2)         XX   attatactatatttttgtgcatgttttaggtacactttaattatacttaactcgctgttgttgtgaaattatatatttttttaaaaaaatttaatttgtt  6845900                                                                 <---------YAB1                                                                --------->AHL20(1)                                                                <---------AHL20(2)                                                                <---------AHL20(1)                                                            <---------AHL20(2)                                                            -------->HAHB4                                                            <--------HAHB4                                                            --------->ATHB51                                                            --------->YAB1                                                            <---------ICU4                                                            -------->ATHB1                                                           <---------YAB1                                                         --------->YAB1                                                   <---------TOE2(3)                      <---------AHL20(2)         --------->AHL20(2)                     --------->AHL20(2)          <---------AHL20(2)  <---------AHL20(2)                 <---------YAB1              <---------AHL20(2)--------->AHL20(2)            <---------AHL20(1)               --------->AHL20(2)--------->YAB1            --------->AHL20(1)              <---------AHL20(2)<---------YAB1                        <           --------->AHL20(2)            <---------AHL20(1)--------->ICU4                           -         --------->AHL20(2)           --------->AHL20(2)<---------YAB1              --------->AHL20(2)      <---------AHL20(2)<---------TOE2(3)--------->AHL20(1)<---------ATHB51      <----------DOF2    - XXXXXXXXXXXXXXXXXX>MIR857          --------->AHL20(2)  <---------AHL20(2) <---------YAB1           <   tagcatattaaaaatatatatgatttaatgttttgaatttttatatattaattaatgtataattattatatttgatttttattctttaaaatataaaaac  6846000                <------MYB46(1)                ----------->GT1           --------->AHL20(2)                <------MYB83              <---------AHL20(2)           --------->ATHB12               --------->AHL20(1) ---------AHL20(1)                   --------->AHL20(2) -------->AHL20(1)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         --------->ZAT6 -------->AHL20(2)     <---------ARR11(3)--------->AHL20(2)                <---------ZAT6 ---------AHL20(2)     --------->ARR11(3)<---------AHL20(2)              <---------ANAC46     -------   aataaaatacaattcatttggttaaaatctatatcacaactaaataatttgaatttgaattgtatttgttttgtttagtgtttaaaactagaggtatcaa  6846100  Previous    Next  AGI:  At4g11230.1    Description:  respiratory burst oxidase, putative / NADPH oxidase, putative. Identical to Probable respiratory burst oxidase homolog protein I (RBOHI) [Arabidopsis Thaliana] (GB:Q9SUT8); similar to RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) [Arabidopsis thaliana] (TAIR:AT5G47910.1); similar to RHD2 (ROOT HAIR DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT5G51060.1); similar to ATRBOH F (RESPIRATORY BURST OXIDASE PROTEIN F), NAD(P)H oxidase [Arabidopsis thaliana] (TAIR:AT1G64060.1); similar to Respiratory burst oxidase homolog protein A (StRBOHA) (NADPH oxidase RBOHA) (GB:Q948U0); similar to NADPH oxidase [Nicotiana tabacum] (GB:CAC87256.1); similar to resp Range:  from: 6840487    to: 6845587    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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