Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ------->GAMYB                                                                   --------->ANAC46                                                                  --------->At4g35610                                                                <---------WRKY38(1)                                                                <---------WRKY45                                                        <---------ATHB51                                                 --------->ATHB12--------->MYB52(1)                                                <---------YAB1  <---------WRKY12            ------->TEIL       <---------TOE2(3)                        --------->ICU4 --------->WRKY18(1) --------->AHL20(2)       <---------AtMYB61           <---------GLK1(2)--------->AHL20(2)           <---------DAG2  <---------ANAC46    ------>MYB83 --------->ARR11(3)   <---------AHL20(2)    <---------ALFIN1 ---------->ID1       --------->AtLEC2     --------->YAB1     <-----------HVH21  <----------DOF2  --- <---------TOE2(3)    ------>MYB46(1)  <---------YAB1<---------AHL20(2)    <---------WRKY38(1)------>ZmHOX2a(2) ------DOF2 <------NtERF2        ----------->ARR10  <---------AHL20(2)---------->DOF2       <--------   tttgacgtttaggtggccaaaaccatccaaacgcttagattttgatcatattgattaaataatgggtcaacggaaagtcaacactttatatatggatcta  6750900                                                                    -------->HAHB4                                                                    -------->ATHB1                                                                    <---------AHL20(2)                                                                    --------->YAB1                                                                    <---------ICU4                                                                    <--------HAHB4                                                                    --------->ATHB51                                                                   <---------YAB1                                                                   <---------ATHB51                                                                   --------->ICU4                                                                 <---------ICU4                           <---------TOE2(3)                     --------->YAB1                        <---------AHL20(2)                      --------->AHL20(2)                     --------->ATHB51                           <---------AHL20(2)                     <---------ICU4                            <---------AHL20(2)                     --------->AHL20(2)                       --------->YAB1                     <---------AHL20(2)                <---------AHL20(2)                     <--------ATHB1                   --------->AHL20(1)                    <---------YAB1                    <---------AHL20(1) <---------YAB1  --------->ATHB12    --------->At5g28300 --------->AHL20(2)         --------->AHL20(2)   <---------AHL20(1)   ----------->GT1--------->YAB1            ----------->GT1<---------AHL20(2)           --------->ICU4 --------->At4g35610--------->ICU4      --------->AHL20(2) --------->AHL20(2)      --------->YAB1 ------->DOF2    <---------YAB1   --------->AHL20(2)<---------AHL20(1)  <---------AHL20(2)   -------- -AGP1         --------->YAB1     <---------AHL20(2)--------->AHL20(1)<---------YAB1    <---------YAB1   aacagcggtaaatctatttataataatttaagaaaattaaaaaaaaatgtaaaatatatatttatattaattattattttttgtattatactgattagat  6751000                                                                                                 <---                              ---------->DOF2                                                    ----                 --------->ARR14(2)                                                              ----                 <---------ARR14(2)                <---------ICU4                                ----                <---------GLK1(1)                 --------->ICU4                                 <--- --------->AHL20(2)  --------->At4g35610     ----------->GT1                              ---------->DOF2 --->GT1        --------->GLK1(1)           <---------ZAT6    <-----------GT1    ----------->GT1 <---   aaaaaaaatatggagcacaaatccgatgaacagaaagttttgaatagtggtaataagtagcattatacgagtctcaattcattttgttaaaaaaaaggaa  6751100          --------->ATHB12        <----------DOF2      ------>NtERF2                                                           <---------GLK1(1)     --------->DEAR3(1)                                                       --------->GLK1(1)  --------->ANAC58                                                           <---------ARR11(3)  --------->ANAC46                                                  <------MYB83  --------->ANAC58                                                 <---------DEAR3(1) --------->SPL7                                      <----------DOF2<------MYB46(1) ------At4g35610                        ------>ZmHOX2a(2)          <---------AtMYB61      ---------->DOF2 ----->HSFC1(2)                         =============================HOX2a_HOX2a     <---------At4g35610 ----->At4g35610            <---------LBD16     ------->TEIL  ========================HOX2a_HOX2a ----->HSFB2a(1)           --------->MYB52(1)--------->AtLEC2 <------ZmHOX2a(1)------>ZmHOX2a(2) ------HSFB2a(1)       ---------->DOF2 <------ZmHOX2a(2)<---------MYB46(3) ------>ZmHOX2a(1) ------HSFC1(2)     --------->YAB1     ==============================HOX2a_HOX2a     --------->At4g35610   gcttacgccgcttgatttgccatcgtaaagaccggaatgagatcgccatgaaactctttggttaggagggaggtgtcctgatctctgagcttcaaagaag  6751200                                                         ------->GAMYB                <---------ANAC58                       ------>MYB46(1)                        <------                <---------ANAC58                       ------>MYB83                           -------              --------->ARR11(3)                       -------->P>>>>>>>>>TBF1                -------         <---------ANAC46                            <---------MYB111(1)                      >>>>>>>ZML2         <---------ANAC58                            --------->AtMYB61                        <------         <---------ANAC58                           --------->MYB46(3)                   <---------MYB46(3)    <----------DOF2                                 --------->DEAR3(2)        --------->GLK1(2)  <<<<   agaatgcttttgcttagagcttgtttatagtcatgccctgaaattgcaagttgaaccaaccctagaagaagaacaacaagaatcgaaatggtggttctag  6751300                     --------->ARR14(2)                     ------->TEIL                     <---------ARR14(2)                     --------->ARR11(3)                ------>ZmHOX2a(2)            <---------AHL20(2)                       --------->ARR14(2)      <---------ANAC46                               --------->ARR11(3)      <---------ANAC55(2)                            <---------ARR14(2) ---HSFC1(1)<-----------TBP              ---------->DOF2         ------->GAMYB -->HSFC1(1)--------->AHL20(2)      <---------ATHB51 <---------ARR11(3)                  <------MYB83 -->HSFB2a(2)       <---------CCA1(2)  <---------YAB1<---------AGP1                      <------MYB46(1) ---HSFB2a(2) <---------AHL20(2)    --------->ICU4  <---------CCA1(2)        ---------->DOF2 <------- <<<ZML2  <-----------TBP  <----------DOF2   ---------->DOF2  ----------->RAV1(1)      --------->ALFIN1   aacccattacttatatatatatgtatcttctttttgaaattatgaaagaaagttggatcttgtacaacagaaatgactgaaaagaataagtgggtctttc  6751400                             --------->REM1(1)                        <------ZmHOX2a(2)                       --------->ARR11(3)                       --------->ARR14(2)                                                      <-----                       <---------GLK1(2)                                                    <------MYB46(1)                       <---------ARR11(3)                                                   <--------                 <---------AHL20(2)                                                         <------MYB83                <-----------TBP                                                            --------->MYB111(2)             <---------AHL20(2)                                                   --------->CCA1(2)             --------->AHL20(2)         <---------YAB1         ---------->DOF2    <-----------TBP       <---------MYB52(1)------>ZmHOX2a(2)              <---------AtLEC2         <---------ARR11(3)   <----------DOF2     <---------ARR14(2)         <----------DOF2                --------->ARR11(3) ---DOF2 --------->MYB52(2)------>ZmHOX2a(1)      <---------DAG2     ---------->DOF2       --------->MYB46(2)   ttagactttgttagtttaatttatagatccttcatcaaaagtttgatagagactttttgaatggagaaagagaaagagagggagatatatagtttggtga  6751500                                             <------ZmHOX2a(1)                                          <------ZmHOX2a(1)                                       <-----------RAV1(2)                                       <---------LBD16                                  <---------HSFB2a(1)                         <----------DOF2  <---------ZAT2                  <------MYB46(1)                   <---------AHL20(2)  --------->ZAT2                  <------MYB83----------->GT1      --------->AHL20(2)  --------->At4g35610             --------->HSFB2a(1)             <----------DOF2  <---------At4g35610             --------->HSFC1(2)   --------->TOE2(3)<---------ICU4 ------->TEIL                     <---------HSFC1(2)   <-----------TGA1--------->ICU4             <-- ----WRKY38(1)        ---------->DOF2 <---------TOE1(1)<-----------HVH21--------->YAB1       -------- -ANAC46  ---------->DOF2        --------->MYB59      --------->ANAC46<---------TOE2(3)      <-------   acgaagctgagaaaaagagaggctgaaagtgaaggaaggtaccaggaggagagaaaacgtcagagtcgatttaatgatgtcttttgttttgaaatttata  6751600                    <---------AHL20(2)                   --------->AHL20(2)                  <---------YAB1                <---------ICU4                --------->YAB1                <--------HAHB4                -------->HAHB4                                  <------NtERF2                --------->ATHB51                                --------->At4g35610                -------->ATHB1                               --------->ATERF1(1)                <---------AHL20(2)                           <------NtERF2               <---------YAB1                                --------->At4g35610               <---------ATHB51                              <---------At4g35610               --------->ICU4                               <---------DEAR3(2)             <---------ICU4                                --------->ETT(1)             --------->YAB1                                <---------At1g77200            --------->ICU4                                 --------->ETT(2)            --------->AHL20(2)                             --------->ATERF1(2)            <---------AHL20(2)                             <---------ATERF1(2)        --------->AHL20(2)                                 <---------RAP2.6(2)   --------->AHL20(2)                            <-----------GT1<---------At4g35610   <---------AHL20(2)                            --------->YAB1--------->RAP2.6(2) -----TEIL--------->YAB1----------->GT1    ------->TEIL   --------->RAP2.6(3) ->AHL20(2) <---------ATHB51            <---------YAB1   <-----------HVH21             <---------TOE2(3) --AHL20(2)<---------AHL20(1)      <----------DOF2      --------->ALFIN1 <-----------GT1   ttcatttttttaaaataattattatatagtttatagtcttttatgaatgtataacaatgtgtcggcagccaaatttttcagttcaaatttaggctgaaac  6751700                                                                  --------->ANAC46                                                           <---------AHL20(2)                                                       <---------AHL20(2)                                                      <---------YAB1                                                   <---------RVE1(1)      <----------DOF2           ----------->GT1   <---------ARR11(3)   --------->ARR11(3)          ------->TEIL       <---------GLK1(2)   <---------ARR11(3)       <---------YAB1        --------->ARR11(3)                          <------   aataacatctttttaaaaaatgttttttttatgaatgtaaaacttttaaaaagatttttatttttttcccacaatctaatatagtttctaaatttttagg  6751800  Previous    Next  AGI:  At4g11050.1    Description:  ATGH9C3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C3); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 19 precursor [Arabidopsis Thaliana] (GB:Q8L7I0;GB:O82513); similar to ATGH9C2 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C2), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G64390.1); similar to endo-1,4-beta-D-glucanase [Pyrus communis] (GB:BAC22691.1); similar to endo-1,4-beta-glucanase [Glycine max] (GB:ABC94542.1); similar to endo-beta-1,4-glucanase [Fragaria x ananassa] (GB:CAC94006.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro doma Range:  from: 6747463    to: 6751307    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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