Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ZAT6                                                              <-----------------AGL2                                                              <-----------------AGL3                                                           <---------SPL7                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                         --------------->AtSPL3                                                         <---------------AtSPL3                                                        <---------ARR11(3)                <---------MYB46(3)                                                  <---------ANAC58      <---------ANAC46<---------MYB52(1)              ---------->DOF2                     <---------ANAC58   <---------TOE2(3)--------->MYB59 ------>ZmHOX2a(1) ----------->GT1  <---------ANAC46    --------->ARR11(3)        --------->ATHB12   ctccttctaacacagataaagaagtaacatgaagaatgacttagatagataggcttgagatcgtactgtttgtggtttgtttagtgattcggtagatggt  6563900             --------->ZAT6                                     <---------GLK1(2)        <---------WOX13(1)                ----------->GT1       <---------ARR11(3)               <---     <---------AHL20(2)           <---------YAB1           --------->MYB52(1)                    ----     --------->AHL20(2)      --------->ANAC58          <---------AtLEC2       <---------AHL20(2) <---    --------->AHL20(2)       --------->ANAC58     <---------ARR14(2) <---------AHL20(2) --------->ANAC46  --------->ARR11(3)         --------->ANAC46     --------->ARR14(2)--------->AHL20(2)--------->ZAT6  <---------ARR11(3)       <-----------GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <-----------GT1   ggaagatttaattgaactctatccaattttcacgacattatagattgtagaaaatttgcattaacagattttaaattgattttttttttcactaaacata  6564000                                                                                             --------                                                                                             <-------                         <----------DOF2                                                     <-------                        <---------ICU4                                                   <---------AHL20(2)                       --------->ICU4                                                   <---------AHL20(2)                  --------->ANAC58                                                      --------->AHL20(1)          --------->AHL20(1)               <---------YAB1                               --------->AHL20(2)          <---------AHL20(1)            --------->AHL20(2)                    <---------GLK1(1)     -          --------->AHL20(2)            <---------AHL20(2)                    --------->GLK1(1)    --          <---------AHL20(2) <---------ANAC58                                --------->ARR11(3)  <--- ------YAB1   <-----------GT1<---------ANAC58                              <---------TOE2(3) <------- ----->AHL20(2)   --------->ANAC46   --------->ARR11(3)                    <---------TOE1(3) -------- ------AHL20(2)   --------->ANAC58   <---------ARR11(3)   <---------MYB52(1) <---------ARR11(3) <----   taattgaagaaatttattacaagtcatctttacttgaaagattttattactaaaaatcccgtttagtttatagttttaagatttcccaaatttaatattt  6564100                                                       --------------->AtSPL8                                                       <---------------AtSPL8  ----------->RAV1(1)                                 <---------YAB1 ->AHL20(1)                                     <---------ATHB12 --ARR11(3)                                    ------>MYB46(1) --AHL20(1)                                    ------>MYB83 -------->LBD16                              ------->GAMYB ------->ANAC46                              <---------MYB59              --------->TOE2(3)      ---- --------GT1                                --------->MYB46(3)            --------->TOE1(3)    ------ --ICU4                                    --------->ANAC58               <---------MYB59   <-------- ->ARR11(3)                 <---------TOE2(3)--------->AtMYB61    <-----------GT1           <-------- -------GT1           ------>ZmHOX2a(1)    --------->ANAC58  --------->ICU4                <---------DAG2   tccccaacaatttgtttaatactcctaatttagatttgttaatgcaaccaaacaatatgagtacttatttacaaaacctaaatactacaggtaccttttc  6564200                                                                              <-----------HVH21                                                                             --------->ANAC46<------- -------->CBF                                                               --------->MYB46(3) ---->ID1                                                                <-----------GT1    <-------- --DOF2                          ------>ZmHOX2a(1)       <---------CCA1(2) *TSS   <------NtERF2   --- -DAG2                     <<<<<<<<<TBF1        ---------->DOF2      <---------YAB1         <--------   gcaatttcccaaaactaaacacactcttcttcttcctcccatagaaacacaaaagccctaaatctcattttcttattacccgtcggagtgaaatgctttc  6564300                                                                                --------->ANAC46                                                                               ------>MYB83                                                                   --------->HSFB2a(1)                            --------->TOE1(3)                     <---------ARR11(3)                        ---------->DOF2                           --------->ARR11(3)    ------>MYB46(1)                      <---------YAB1                              --------->ARR14(2)    ------>MYB83 ---DOF2            --------->YAB1                                <---------ARR14(2)  <---------MYB59 -ANAC58            <---------ICU4                 <---------CCA1(2)           ------>MYB46(1) ------->DOF2    --------->YAB1     <----------DOF2<---------At4g35610       --------->MYB46(3)    -- -ANAC58      <----------DOF2      --------->TOE2(3)             <---------CCA1(2)    --------->AtMYB61   gaaagcagcaagagagctttcatcatcaaagcttaaacctttattcgctcttcatctctcttccttcaaatcttccatacccactaaaccaaacccttct  6564400                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                      <---------ANAC58                                                      <---------ANAC58                     --------->AtMYB61          --------->ICU4                     <---------ALFIN1      ------->GAMYB <-----------ARR10                    --------->MYB46(3)     --------->DEAR3(1)                  <---------ALFIN1         --------->RAP2.6(2)         --------->TOE2(3)                 --------->ANAC46       <---------ARR11(3)                 --------->MYB46(3)                                ---------       --------->ARR11(3)               <---------ARR14(2)                                  ---------      <---------CCA1(2)          <---------ARR11(3)   <---------ANAC46        ------>ZmHOX2a(1)  ------>ZmHOX2a(1)------>NtERF2 --------->ARR11(3) <-----------GT1  <<<<<<<<<TBF1      ------>ZmHOX2a(1) ---->ZmHOX2a(1)  --------->ANAC46      --------->ARR14(2)  <-----------GT1---------->ID1   <--------   cctccttcatatctcaatccccaccacttcaacaatatctcaaaaccgccatttttgcgtttctactcttcttcttcgtcctctaatctccttccgctaa  6564500     ----------->GT1  --------->CCA1(2)            --------->YAB1              <---------GLK1(1) >LBD16                       <---------ATHB12   <---------TOE2(2) >At4g35610                 --------->WOX13(1)  <-----------RAV1(2) -At4g35610              --------->TOE2(3)<---------MYB52(1) <-------TEIL                  --------->LBD16   acagagatgggaattacaacgatacaacttcaatcacaatctccgtttgcccaggttgtggagttcatatgcaaaactcaaacccaaaacatccaggttt  6564600                                                           <---------CCA1(2)                                                       --------->ANAC58                                                       --------->ANAC46                                                 ------>ZmHOX2a(2)                                                --------->At4g35610                                                --------->bZIP60(1)                                                <---------bZIP60(1)                                      ------->TEIL   <---------ALFIN1                     --------->YAB1                           <------ZmHOX2a(1)    <---------At4g35610                      <---------ATHB12               ------->GAMYB         <---------CCA1(2) --------->ANAC58                --------->WOX13(1)            ----------->RAV1(1)--------->ATHB12<---------ARR11(3)                    <-------TEIL       --------->MYB46(3)  =============================HOX2a_HOX2a          <---------AHL20(2)   cttcatcaaaccatcaacagagaaacagaggaacgatttgaatcttcgtgatctcacacccatctctcaagagcctgaatttatagattcaatcaaacga  6564700                 --------->YAB1                <---------ATHB12               ------>MYB46(1)                                                    <------MYB46(1)               ------>MYB83                                            <---------MYB46(3)              --------->WOX13(1)                                   --------->ATHB12            --------->MYB46(3)                     --------->MYB46(3)<---------MYB52(1) --------->WOX13(1)     --------->ATHB12                             ------->TEIL   <---------ARR11(3)  <-----------HVH21    <---------YAB1     <---------AGP1       --------->ICU4  <-------TEIL          <------MYB83   gggtttatcattgaaccaatcagtagttctgacttaaaccctagagatgatgaaccatcagattcaagaccattggtttgtgctaggtgtcattcactta  6564800  Previous    Next  AGI:  At4g10620.1    Description:  similar to GTP binding [Arabidopsis thaliana] (TAIR:AT3G57180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22017.1); contains domain SSF52540 (SSF52540); contains domain PTHR11089 (PTHR11089); contains domain PTHR11089:SF3 (PTHR11089:SF3); contains domain G3DSA:3.40.50.300 (G3DSA:3.40.50.300) Range:  from: 6564275    to: 6566500    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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