AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                        --------->ANAC46
                                        --------->ANAC58
                                        --------->ANAC58                         <---------ARR11(3)
       <---------ARR14(2)           <-----------GT1                   --------->HSFB2a(2)         --
       --------->ARR14(2)        <---------YAB1                       <---------HSFC1(1)         <--
 ------>ZmHOX2a(1)             --------->YAB1                         <---------HSFB2a(2)       <---
---------ANAC58               <---------YAB1                      <----------DOF2--------->ARR11(3)
---------ANAC58               ----------->GT1        --------->AtMYB61--------->HSFC1(1)   ---------
 
tttcctgccatatacacatgaaacacctaaaaaatgataatacactccattagagaccaaaaccaaaaactttctagaaacttagatatcaaactcgtta  6286900
        <---------YAB1
   <---------bZIP60(1)
   --------->bZIP60(1)                                                               <---------GLK1(1)
   <---------TGA2(1)                               <----------DOF2              ------>NtERF2  <----
   --------->REM1(1)                               <---------DAG2              ----------->HVH21----
------->ANAC46       <---------WOX13(1)           <---------ANAC58             --------->DEAR3(1)
-------TOE2(3)     --------->ATHB12               <---------ANAC58    --------->ARR14(2)  ------>ZmHOX2a(1)
--------GT1       <---------ATHB12        --------->YAB1              <---------ARR14(2)  --------->LBD16
-->GT1  --------->At4g35610          <----------DOF2           <-----------RAV1(2)   --------->GLK1(1)
 
aacgttacatcatcagagccagtgattgatatatcatcttctttatcaaaatagcttttccattctacaggcgaatacttctccgacgaattcctgaaac  6287000
                                  <------ZmHOX2a(1)
                                 ----------->GT1                         <------ZmHOX2a(1)
                            ------>ZmHOX2a(2)                           <----------ID1
                            =============HOX2a_HOX2a                  <------ZmHOX2a(1)    <--------
                           <------ZmHOX2a(2)                  <---------ANAC46            <------NtERF2
                           ==============HOX2a_HOX2a         <---------TOE2(3)          <---------DEAR3(1)
------ID1                 --------->ARR14(2)                --------->MYB52(1)    <------ZmHOX2a(1)
------->RAV1(1)           <---------ARR14(2)              <---------MYB52(2)     <----------ID1
 
aacaaaaaccaatttcacgatgaaaacgagatcggaaggagaattgagaattgaaactgaaactaacgtagaaggaggacgaagaggacgagcggcgaag  6287100
        <---------ZAT2
        <---------At4g35610
        --------->HSFC1(2)
        <---------HSFB2a(1)
        --------->HSFB2a(1)
        <---------HSFC1(2)
       <---------ARR14(2)
      <------NtERF2                            --------->ANAC46
     --------->LBD16                    --------->ARR11(3)
    --------->DEAR3(1)                  <---------ARR14(2)
   <------NtERF2                        --------->ARR14(2)
   <---------LBD16                      <---------ARR11(3)                          ---------->DOF2
   --------->ATERF1(1)              <---------TOE2(3)                    <---------ARR14(2)
  ------>NtERF2                 ------>ZmHOX2a(1)      --------->ARR14(2)------->TEIL    <----------DOF2
 --------->ANAC46               ----------->RAV1(2)    <---------ARR14(2)--------->ARR14(2)  -------
-ANAC46--------->ARR14(2)       <---------At4g35610   <------ZmHOX2a(1)  --------->GLK1(2)   <------
 
acagacgccggagcttctatgggttctaaatgttcctctgaggtatcttcacgaagaggattcaaatttgaagacgaatccattgttgaaagctttttag  6287200
                                ------>ZmHOX2a(2)
                              <---------ARR14(3)
                              <-----------ARR10
                              --------->ARR14(3)
                              <---------GLK1(2)
                              <---------ARR11(3)
                              --------->ARR11(3)
                              <---------ARR14(2)
                              --------->ARR14(2)
                             <---------CCA1(2)
                    <---------ICU4
                 --------->YAB1<------ZmHOX2a(2)
                <---------AHL20(2)                                              <-----------GT1
                <---------YAB1--------->AGP1                 <<<<<<<<<TBF1  <---------DAG2
               --------->AHL20(2)                      <<<<<<<<<TBF1        <----------DOF2
    --------->YAB1  --------->YAB1                  <<<<<<<<<TBF1 --------->HSFB2a(2)    *TSS      -
-->HSFB2a(2)   <---------AHL20(1)            XXXXXXXXXXXXXXXXXXXX>MIR847   <---------ANAC58        -
---HSFB2a(2)   --------->AHL20(1)          <-----------GT1<<<<<<<<<TBF1    <---------ANAC58  -------
 
aaactgatcaaaatcgaatataataatctcacagatcttctcagtatcactcttcttcttcttcttcttctacaatttgcttttttcagttttcagtcaa  6287300
                                                                                                   -
              <---------ALFIN1                                                                     <
           ----------->HVH21                                                                       <
         --------->At4g35610                                                                      --
         ----------->GT1                                                                 --------->ANAC55(2)
         <------MYB83                                                            <XXXXXXXXXXXXXXXXXX
         <------MYB46(1)                                                         <---------AHL20(2)-
      <------ZmHOX2a(1)                                     <-----------------AGL1       <---------ANAC55(2)
----------->CBF                                      <-----------RAV1(1)        --------->AHL20(2)--
-------->AHL20(2)        ------->TEIL         <---------CCA1(2)             <---------YAB1   -------
-->YAB1  <---------At4g35610               <----------DOF2  ----------------->AGL1     <-----------GT1
 
aattcaataggaaggtgacacctcgatggacgtagaatagtatgggcttttatctcttgttgggccattttaggcccatatgatttaatatcacttgtct  6287400
     --------->AtLEC2
 ------>MYB83
 ------>MYB46(1)
--------->ANAC46
<---------ALFIN1
-------->DEAR3(1)
---------MYB55(2)
---------MYB111(2)
------->ANAC58                         --------->MYB52(1)
XXMIR1886.1                       <---------YAB1
-------->MYB46(3)               <---------ICU4     ----------->GT1        <---------ZAT6
------->ANAC58                 --------->ICU4--------->DAG2      ---------->DOF2
--->ARF1                  ----------->GT1   ---------->DOF2 <---------ANAC46
 
cacccaccatgcagttttcaactttcaacgggtcaatatgactaacaaaaagggtcgtcaattgtgggaaaagagtagtgtttgtttagttccaagtccg  6287500
                                                                                                   -
                                                                                                  xx
                                                                                            <-------
                                                                                            --------
                                                                                   <----------------
                                           --------->ATHB12                        <----------------
                       ------>ZmHOX2a(2)  <---------YAB1                       <---------DAG2     <-
                      <------ZmHOX2a(2)   --------->ICU4           --------->AHL20(2)--------->LBD16
                     <---------ARR14(2) --------->YAB1           ----------->GT1   -----------------
                     --------->ARR14(2)<---------YAB1          ---------->DOF2 <----------DOF2  ----
 
acttagaagttagaagtgattttggatccaaaatgttgttttatgatgatttataagaaatttgaagaaagaaaatatagaacttttccgaaatagggtt  6287600
                                                                                      <---------AHL20(2)
                                                                                      --------->AHL20(1)
                                 --------->DAG2                                       <---------AHL20(1)
-------->GLK1(2)                ---------->DOF2                                       <---------ARR11(3)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                   --------->ARR11(3)
--ZAT6             <---------ARR11(3)                                            ------>ZmHOX2a(2)
--->GT1            <---------GLK1(2)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
-AGL1   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <xxxxxxxxxxxxxxxxsmallRNA(i)--------->AHL20(2)
-AG  --------->LBD16   <---------ANAC46                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
--------GLK1(2)  ----------->ARR10                    --------->LBD16           <------ZmHOX2a(2)
>AG <---------LBD16--------->ARR11(3)                <---------ANAC58          <---------ARR14(2)
------->ARR10    <---------TOE2(3)     <---------ZAT6<---------ANAC58          --------->ARR14(2)
 
agaatctccagggtgcaaataagattttgtgggaaaaaagtagtgtttgtttagttccgagtctgacttagaagtgattttggatccaatatattgtttt  6287700
                                                 ----------->GT1
                                                 <---------ZAT6
                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        ---------->DOF2
                                        <-----------------AG                 --------->ARR11(3)
                                        ----------------->AG               <---------TOE2(3)
                        --------->AHL20(2)--------->LBD16          <---------ZAT6<---------ANAC46
                   <------ZmHOX2a(1)<---------DAG2                 ----------->GT1<---------LBD16
         <XXXXXXXXXXXXXXXXXXXXMIR865-3P <-----------------AGL1   <---------ANAC46<---------ANAC58
 --------->ETT(2) ----------->GT1<---------ARR11(3)            --------->LBD16   <---------ANAC58
 <---------ETT(2)<---------TOE2(3)  <----------DOF2          <---------LBD16 <---------ARR11(3)  <--
 
tatgtcgatattagaaatttgaggaaaaaaaatgtagaacttttccgaaatagggttagaactctccggagtgtaaataagatttcgtgggaaaagaata  6287800
<- Previous    Next ->

AGI:  At4g10050.1   
Description:  hydrolase, alpha/beta fold family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO16274.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase-like; (InterPro:IPR000639); contains InterPro domain Lipase, active site; (InterPro:IPR008262); contains InterPro domain Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812)
Range:  from: 6284447    to: 6287290    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version