AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                              ------>ZmHOX2a(2)
                             <------ZmHOX2a(2)
                            --------->ARR11(3)
                            --------->ARR14(2)                          <----------DOF2
                            <---------ARR14(2)               <-----------GT1              --------->HSFC1(1)
                            <---------ARR11(3)               <---------ARR11(3)           --------->HSFB2a(2)
                            --------->ARR14(3)      ------->GAMYB      <---------ANAC58   <---------HSFB2a(2)
                            <---------ARR14(3)   ----------->RAV1(1)   <---------ANAC58   <---------HSFC1(1)
         <----------DOF2<-----------GT1         --------->MYB46(3) <----------DOF2  <---------ALFIN1
     <---------CCA1(2)  --------->YAB1     --------->TOE2(3) --------->ARR11(3)     --------->AtMYB61
 
tctctcccatctctttctctcttggaatcacgatcttgatgctcaacatcaacaacagacttattatcttctttgcttttacttccaccacttcgagaac  6251900
                                                                                                 ---
                                                                                                ----
               <----------DOF2                       --------->DEAR3(1)                         <---
          <---------At4g35610                     <---------ALFIN1                         ---------
   ---------->DOF2                          <---------CCA1(2)                          <---------GLK1(2)
 
tactctcaaagtctgatgctttaagactcattcttctcttctcacttctatctccaccgtcttgctctccatcttgataccaagtacttagcttctccaa  6252000
                                                            --------->ANAC58
                                                            --------->ANAC58
                                                            --------->ANAC46
                                                           --------->LBD16
---->GAMYB                                               --------->TOE2(2)
----->MYB46(3)                                           --------->TOE1(2)
------MYB52(2)          <---------AHL20(2)        --------->TOE2(3) <---------TOE2(3)
>HSFB2a(2)      <<<<<<<<<TBF1                     --------->TOE1(3) <---------TOE1(3)   <------ZmHOX2a(2)
 
cgaactctcttcttgtttcttcttcatttttttgcgaaaactgtgctacaaaaccctaaacccacgaaattagggtttcgacattaccacgatcaattcg  6252100
                          <---------ANAC55(2)
                          --------->ANAC55(2)
                       <---------MYB52(1)
                     <---------ANAC58
                     <---------ANAC58                                               <---------At4g35610
        <---------HSFB2a(2)                            <-----------GT1              --------->At4g35610
        --------->HSFB2a(2)                         <---------GLK1(2)      --------->HSFB2a(2)
 
ggttcgattttctataactgagtttcgttacttaaaacatccacaatagagtttggattttcaattccaaaatcgtttcgagattacagatgaaaaattt  6252200
                                           --------->ETT(1)
                                         <-----------HVH21
                                        <---------ANAC46
                                        <------MYB83
                                        <------MYB46(1)
                                       --------->MYB55(2)
                                       <---------MYB46(3)
                                       --------->MYB59
                            ------>ZmHOX2a(2)
                            ----------->GT1<---------DEAR3(1)
                           <------ZmHOX2a(2)
                          <---------ARR14(2)
                          --------->ARR14(2)
                          <---------ARR11(3)                                        *TSS  --------->ALFIN1
                          --------->ARR11(3) <------NtERF2                        --------->ANAC46
              ---------->DOF2      <-----------RAV1(1)                         <---------ZAT14  <---
 
gagtttagaaatgaaattagagcgaagaagatcggaaaatgttgggtcggagaagatgagtgagtttgtgagagagagagagaacacggcgaagtgcgag  6252300
           <-------TEIL                                                                  --------->ANAC58
     --------->ANAC58                                                                    --------->ANAC58
     --------->ANAC58            <---------ANAC58                                   <----------ID1
    --------->SPL7               <---------ANAC58                               <------------CBF
 --------->ANAC58                <---------ANAC46                              --------->ATHB12 ----
 --------->ANAC58            <------------CBF           <-----------GT1     <---------ZAT6  <xxxxxxx
---ZmHOX2a(1) --------->ANAC46  <---------MYB46(3)------------>CBF      <------------CBFxxxxxxxxxxxx
 
gaacacgaacgacatacacagaagtcaaaatggattgggtgaagcccatttactccaatttacctagtgtctaaaaattgtgttattgggccaagcccat  6252400
                                                    --------------->AGL15
                                                    <---------------AGL15
                                                    ================================================
                                                   ----------------->AGL1
                                                  <-----------------AGL1          --------->ANAC58
                                                  <-----------------AG            --------->ANAC55(1)
                                                  ==================================================
                                                 <xxxxxxxxxxxxxxxxsmallRNA(i)     --------->ANAC55(2)
                                                <----------DOF2        --------->TOE2(3)      <-----
                                                xxxxxxxxxxxxxxxx>smallRNA(i)     <---------LBD16
                                               xxxxxxxxxxxxxxxx>smallRNA(i)     --------->MYB52(1)
                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               --------->YAB1        -------
                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              --------->TOE1(3)    <xxxxxxx
                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <---------AHL20(2)    <xxxxxxxxxx
          --------->TOE2(3)                --------->ANAC58       --------->AHL20(2)  <xxxxxxxxxxxxx
----->AHL20(2)      ----------->GT1 --------->AHL20(2)          <---------ARR11(3)--------->ANAC46--
xxxxxxxxxxxxxxxxsmallRNA(le3)----------->GT1  ------->TEIL      --------->ARR11(3)--------->ANAC58--
xxxxxxx>smallRNA(se3) ----------->GT1      --------->ANAC58   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
 
ttattccaattcacctaaacaaatggggaaaattgtcaaaaaaatcacgaactttcaaatttgggaagatttaatcttaaacttcacggaagacaaataa  6252500
                                                                                             -------
                                                                 <---------ANAC46           <-------
                                                                 ----------->GT1            <-------
                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   xx
                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   xx
                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --
  --------->DAG2                                       <xxxxxxxxxxxxxxxxsmallRNA(i)        <--------
 ---------->DOF2                                       <xxxxxxxxxxxxxxxxsmallRNA(s)     <---------YAB1
====================================================================MADS_MADS          --------->AHL20(1)
==================================================================MADS_MADS           <---------AHL20(2)
----AHL20(2)                                          <xxxxxxxxxxxxxxxxsmallRNA(i)    --------->ATHB51
-->AHL20(2)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      xxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxsmallRNA(si3)     xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<--
xxxxxxxxxxxxxsmallRNA(si3)  <----------ID1        ----------------->AG        --------->MYB52(1)<---
xxxsmallRNA(i)           <---------AHL20(2)       --------------->AGL15      xxxxxxxxxxxxxxxxxxxxxxx
--------->GT1           <---------AHL20(2)       ----------------->AGL1      xxxxxxxxxxxxxxxxxxxxxxx
------->YAB1            --------->AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->AHL20(2)
 
atcgtaaagtttttgttgattttcgaaataaatgacaaagtttttgttgacttcccatttgagtcatgtcgttaaataggttaacagaattattttacgg  6252600
        xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
       <---------ANAC46
       <---------ANAC58
<---------DOF5.7(2)
-->ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
--At5g28300
--LBD16<---------ANAC58
xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
------->DOF5.7(2)
---GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ATHB12
x>smallRNA(fl3)                           <---------YAB1<xxxxxxxxxxxxxxxxsmallRNA(i)
--------DOF2<---------ARR14(2)            <---------ATHB51                <-------GAMYB
------ANAC46--------->ARR14(2)      --------->O2       ---------->DOF2   ----------->GT1
>smallRNA(si3)                      <---------O2     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       ---
>smallRNA(fl3)                 --------->MYB52(1) <----------ID1  <---------MYB52(1)   <---------AHL20(2)
 
cgttaatgtctcgtgtatatgctctgttagaacaaaacgacgtcgattattgagagacaaaagaacgtcgttttgtctgttaaaacaaatttaaaccatg  6252700
                                              <xxxxxxxxxxxxxxxxsmallRNA(s)
                                            <---------DEAR3(1)
                                         <------MYB83
                                         <------MYB46(1)
                                        <---------MYB46(3)
                                       --------->ALFIN1
                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                  <---------WRKY12
                                  xxxxxxxxxxxxxxxx>smallRNA(i)
                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                 --------->WRKY18(1)
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                           xxxxxxxxxxxxxxxx>smallRNA(s)
                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                          xxxxxxxxxxxxxxxx>smallRNA(s)
                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                       xxxxxxxxxxxxxxxx>smallRNA(s)
                     xxxxxxxxxxxxxxxx>smallRNA(i)
                     xxxxxxxxxxxxxxxx>smallRNA(s)         --------->ICU4               --------->AHL20(2)
                    xxxxxxxxxxxxxxxx>smallRNA(s)         <---------ARR11(3)        ----------->GT1
                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ARR11(3)       <---------TOE1(3)
                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) --------->HSFB2a(2)         <---------TOE2(3)
               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------HSFB2a(2)     --------->CCA1(2)
            --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------LBD16
---->TEIL   <---------AHL20(2)<---------TOE2(3)      <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
 
aatctccaattcgattttattatctgcgattttgaggtcaaggtgggtctgtgatttcgagataatgaaatcgatttggggatataaggtttaaatttgt  6252800
<- Previous    Next ->

AGI:  At4g09980.1   
Description:  EMB1691 (EMBRYO DEFECTIVE 1691); S-adenosylmethionine-dependent methyltransferase. Identical to Methyltransferase-like protein 1 (EMB1691) [Arabidopsis Thaliana] (GB:Q94AI4;GB:Q9T0F6); similar to EMB1706 (EMBRYO DEFECTIVE 1706), S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT4G10760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49453.1); similar to hypothetical protein OsI_032682 [Oryza sativa (indica cultivar-group)] (GB:EAY78723.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63666.1); contains InterPro domain MT-A70; (InterPro:IPR007757)
Range:  from: 6247732    to: 6252285    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version