Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->TOE1(2)                                                                      <---------HSFB2a(1)                                                         --------->GLK1(2)                                                         --------->ARR11(3)                                                         --------->ARR14(2)                                                         <-----------ARR10        <-------TEIL                                     <---------ARR11(3)                    <-----     ----------->GT1      --------->DAG2                 --------->ARR14(3)     --------------->AGL15  --------->MYB52(1)     ---------->DOF2                 <---------ARR14(3)     <---------------AGL15 ----->LBD16       <------ZmHOX2a(2)                     <---------ARR14(2)   --------->MYB52(1) <--- -----HSFB2a(2)   <---------ARR11(3)                ----------->GT1  ------->TEIL <---------MYB52(1)- ---->HSFB2a(2)   --------->ARR11(3)       --------->CCA1(2)    ---------->DOF2----------------->AGL1   agagaaacggttcatactgagatcaacaaaagtgagattggggagagacgagaatggaaaatcttcgaaagtaccttcgataccggtattagtaagattc  5640200                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <---------ALFIN1                          ----------->RAV1(1)                       --------->ANAC58                       --------->ANAC58                       --------->ANAC46                    --------->ZAT2    ------>MYB46(1)                    <---------ZAT2    -------->P                    <---------WRKY18(1)                    --------->At4g35610               <---------ANAC58                    <---------At4g35610  ----------->GT1           --------->WRKY38(1) --TEIL           --------->ZAT18     ------>MYB83    <---------ANAC58 --------GT1  --------->LBD16  --------->AtMYB61      <---------ANAC46                      ------->TEIL ------>GAMYB--------->LBD16--------->REM1(1)  ---------->DOF2    <---------WOX13(1)<----------DOF2   aaccgtataatgctcccgagtgagcaggcaacaccataccaactggtacaaaagctgcttgtgtttggattgacccaagaagatagctttgatgaacttg  5640300                                                                                                    -                                                                                                    <                                                                                                -----                                                      <---------HSFB2a(2)                 <---------YAB1             --------->WRKY12                     <-------GAMYB                         --------->CCA1(2)        ---------->DOF2    ---------->DOF2    <---------ALFIN1   ---------->DOF2       --------->ARR11(1)   tctggtttgtgaaagttgacttccatttcaaaagagcattagcttcttccaccgttgcagaaacagcaaaagaacaactcaaaactatagatatgatcaa  5640400             --------->O2                                        <-----------GT1          <------ZmHOX2a(2)   --------->ANAC58              <---------RVE1(1)         <---------ARR11(3)   --------->ANAC58         --------->MYB52(2)         --------->ARR11(3)   --------->ANAC46         ----------->GT1 -------->ARR11(3)      <----------DOF2              <--------P <<<<<<<<<<GT-3b ---------ARR11(3) <----------DOF2                <---------TOE2(3) <----------DOF2 ----->DOF2  <---------O2 <-----------GT1 <----------DOF2<---------ZAT6                             <   aagaacttgaagatcacgaggcttttctttacaagccattctctctttgaatgaggttagtgatatttttctttctgggtttgttttgttcatacagttg  5640500                                                     --------->LBD16                                                    <---------ANAC58                                                    --------->ANAC55(2)                                                    <---------ANAC58                                            <---------WRKY18(1)                                           --------->WRKY12           <---------ANAC58                                           --------->WRKY45           <---------ANAC58                                           --------->WRKY38(1) >>>>>>>>>WRKY6            <----------ID1                                          --------->DOF5.7(2)--------->WRKY45  ----------->GT1                                         <-------GAMYB----------->HVH21      --------->ANAC55(2)                    --------->YAB1      <---------ANAC46     --------->WRKY38(1)       <-------------   <---------ARR11(3)      ----------->GT1<---------MYB52(1) --------->WRKY12<---------ANAC55(2) ---------GLK1(2)<----------DOF2   --------->ATHB12 <---------ANAC55(2)  <-----------HVH21<------ZmHOX2a(1)   cagattatctctctacggtcttttataaactgaaaattgatttcgttgactagtccgtgatagttgactatgggttgtcacttgttaatagaggacaaat  5640600                                   --------->DOF5.7(2)                                 *TSS                              <-----------GT1                          --------->ATHB12                          <--------HAHB4                            --------->ZAT6                          -------->ATHB1                            <-----------GT1                          --------->YAB1                          <-----------GT1                      --------->AHL20(2)                         <---------ICU4                      <---------AHL20(2)             <---------ARR14(3)     <---------AHL20(1)   --------->ATHB51           --------->ARR14(3)     --------->ARR14(2)   <---------ICU4             --------->GLK1(2)     <---------ARR14(3)   <---------AHL20(2)         --------->ARR11(3)     --------->ARR11(3)   -------->HAHB4             <-----------ARR10                           <---     --------->ARR14(3)  <---------ATHB51            --------->ARR14(2)                          ----     <---------ARR14(2)  --------->ICU4          --------->YAB1  --------->YAB1             <--------     <---------ARR11(3)  <---------YAB1    <-----------HVH21    --------->ICU4 <---------ALFIN1------     --------->AHL20(1)--------->YAB1   <----------DOF2  <---------LBD16<---------ZAT14    --------->AHL20(2) --AtSPL8           <----------DOF2<---------MYB52(1)<---------ARR11(3) --------->ZAT14 --------->TOE2(3)   aagtcaatatcttgaattctctctttaattattagccgtttactttgtcaaacaaaatcttcggaaattatcacttcacacacacattcacattaatata  5640700                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                     ------->TEIL            <---------ANAC46                                                   <---------YAB1     <---------ZAT14                                                         --------->YAB1     --------->ZAT14                            --------->ARR11(3)          <---------AHL20(2) ------AHL20(2)                                 <---------ARR11(3)          <---------YAB1 ----->AHL20(2)        <---------MYB46(3)      --------->YAB1  <----------DOF2<---------AHL20(2) -YAB1      <---------ANAC58                ---------->DOF2 <---------ARR11(3)--------->AHL20(2) ----->TBP  <---------ANAC58        <----------DOF2         --------->ARR11(3)<---------AHL20(1)   aaaatagtttactgacttgtttaagttgttgttttctacttttgtataaagataatgtatgagttctttgaatgttatattataatgtatttaaaaaaaa  5640800                             <------MYB46(1)                             <------MYB83                            --------->ALFIN1                            <---------MYB46(3)                            <---------AtMYB61                          --------->ARR14(2)                     <------NtERF2                    ------>NtERF2                   --------->ATERF1(2)                   <---------RAP2.6(2)                   <---------ATERF1(2)                                                         ------                   --------->ANAC46                                                     <--------P                  --------->RAP2.6(3)<---------AHL20(2)                           --------->CCA1(2)            --------->ARR11(3)       --------->AHL20(2)                       --------->AHL20(1)        ---------->DOF2  --------->ATHB12               ----------->GT1       <---------AHL20(2)      <---------AHL20(2) <------ZmHOX2a(1)    ----------->HVH21               --------->AHL20(2)  <--   acacttatataaaagttattgacggcaggattggtggatttatatggactgacaacgatggtcaatttttcattagcaaataaaatatgggttagtcatg  5640900                                                                         <---------YAB1                                                                  ----------->GT1                                                                  --------->YAB1       --------->TOE2(3)                              --------------->AGL15             <---------ZAT14  <---------ARR11(3)                              <<<<<<<<<<<<<<<<<LFY<---------TOE2(3)     --------->AHL20(2)      <----                              <---------------AGL15             --------->ZAT14  --------->ARR11(3)                <---------AHL20(2)          <-------TEIL <---------DAG2 --------->AHL20(1)      ----- --->ICU4       --------->AHL20(2)  ----------->GT1      <----------DOF2<---------AHL20(2)     ------ -----TEIL  <---------TOE2(3)----------------->AGL1   <-----------GT1   <---------AHL20(1)     ------   ttcatttggacgataagattaattagttttttcaacaatgggaaaatgcattgatgttacttttagtatagtaatataatacaaatctttcttaaaaata  5641000             <---------ANAC46                                               <---------YAB1      <----------DOF2                                                      <---------ARR11(3)      <---------DAG2                                                       --------->ARR11(3) -----ARR11(3)                                                           --------->ICU4         ----- ---->ARR11(3)          <-----------GT1--------->AHL20(2)           ----------->GT1            ------ --->RVE1(1) <---------ANAC58       --------->TOE2(3)          --------->YAB1                  <----- --->CCA1(1) <---------ANAC58 --------------->AtSPL8   <<<<<<<<<<GT-3b--------->AHL20(2)   ----------   tctcttaactttattgtgtgattttttaacaacttgtaccataaaataagaaactatttttcttataagaatgtaaatatcatttcaaaaaatgaaagat  5641100  Previous    Next  AGI:  At4g08850.1    Description:  leucine-rich repeat family protein / protein kinase family protein. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G35710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68996.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66621.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73988.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Tyrosine protein kinase, active site; (InterPro:IPR008266); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N Range:  from: 5636486    to: 5640633    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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