Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ARR14(2)                                      <---------GLK1(2)                                 --------->AtMYB61                                 --------->DEAR3(1)          <---------GLK1(2)                              --------->AtMYB61              --------->ARR14(2)                              <---------ALFIN1               <---------ARR14(2)                           <---------ALFIN1                --------->LBD16                           --------->ANAC46               --------->HSFB2a(2)              <------ZmHOX2a(2)  <---------ALFIN1         <---------HSFB2a(2)             --------->ARR14(2) --------->MYB46(3)       <---------LBD16             <---------ARR14(2) <---------MYB55(2)    --------->ATERF1(1)                          --      ---------->DOF2    ----------->RAV1(1)        <---------ZAT18 ---------->DOF2                --  ----------->GT1 <---------CCA1(2)   <---------ARR14(2) <------NtERF2---------->DOF2            ----   gagaccgataaatccgatccatctctccaacaccaccaccgattcggaaactagtaggctccggaaactccaaagagcgagtcatcaacgaagaagtcga  5406900             <---------ZAT2             --------->At4g35610             --------->ZAT2             <---------At4g35610             ----------->RAV1(2)                                                        --------->LBD16           <-----------RAV1(2)                                                        <---------LBD16        ------>ZmHOX2a(2)                                                            --------->SPL7       <------ZmHOX2a(2)                                                             --------->MYB52(1)      <---------ARR11(3)                                                           <---------SPL1(2)      --------->ARR14(2)                                                           <---------SPL7      <---------ARR14(2)                                                          --------->DEAR3(1)      --------->ARR14(3)                   <---------YAB1    <------NtERF2     --------->ANAC46      --------->ARR11(3)                   --------->ICU4    ------>NtERF2     ------->GAMYB      --------->AGP1                  <---------ANAC46      --------->DEAR3(1)--------->DEAR3(2)      <---------ARR14(3)          <---------At4g35610       --------->RAP2.6(2)--------->DEAR3(1)    ----------->ARR10             --------->At4g35610      --------->RAP2.3(1)--------->MYB46(3)  ---------->DOF2                 <---------ZAT2         --------->ANAC46     <------------AtMYB77 ------->ANAC58           <<<<<<<ZML2<-------TEIL        <---------DEAR3(1)   <---------MYB55(2) ------->ANAC58 --------->MYB52(1)--------->ZAT2        ------>ZmHOX2a(1)    <---------At5g28300 ----->MYB52(1)----------->HVH21 ------->TEIL <---------WOX13(1)           ----------->HVH21   aacggaaagatcttcagctgacgaactagaacatgaagctgcgtcgtaattgatattcctcgccgcatcgcgacgctctaaccgccgtaccggagtaata  5407000                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                          --------->ANAC58                                                             --------->At4g35610                                                             <---------At4g35610           ------>ZmHOX2a(1)           --------->STY1(2)     --------->ZAT2        ------>ZmHOX2a(1)              <---------STY1(2)     <---------ZAT2      <-----------GT1 ---- <---------CCA1(2)   <---------At4g35610     <---------GLK1(1)           --------->SPL7     ---------   ttcttatctcctcctcttcgtccagttgatttcttcatacgagctagaattctgtccataaccagctcaaatccatacgctatttacaagttccaagtca  5407100                      <---------ANAC58                      --------->LBD16                      <---------ANAC58         ----------->GT1              ------->TEIL            <---------ANAC58     --------->LBD16  --------->LBD16         --------->GLK1(2)            <---------ANAC58    --------->HSFB2a(2)         <-----------ARR10           <---------ZAT2       <---------HSFB2a(2)     <---------ZAT14 ----->ICU4  <---------ALFIN1        --------->ZAT2      <---------LBD16   <---------ANAC46       >>> >ANAC46<---------GLK1(2)   <----------DOF2   ----------->GT1             <---------LBD16         >>>   aaattgaagagaatcgcacctcttacttggcttcaatggagcttggaattggaaaattttcccgagaaaaaaaactcgcgggagtgaagaagaccgagaa  5407200                <------NtERF2               ------>NtERF2              <---------ATERF1(2)              --------->ATERF1(2)                                                          <---------KAN4(1)              <---------DEAR3(1)                                                           --------->KAN4(1)              <---------RAP2.3(3)                                                    <---------LBD16             --------->RAP2.6(3)                                                    <---------ANAC58           ----------->HVH21                                                        <---------ANAC46           ----------->TGA1                                                         <---------ANAC58         ----------->RAV1(2) --------->CCA1(2)                              <---------DEAR3(1)       <---------ARR14(2)   --------->ARR11(3)                             <---------LBD16 --------->ICU4 >>>>>>CBP60g--------->SPL7 <---------ARR11(3)                ----------->GT1  --------->ALFIN1   *TSS >>>>>>SARD1--------->MYB52(1) <---------YAB1     ---------->DOF2       ---------->DOF2   <---------KAN4(2)   atttgggcaaaacctgacggcgaagagagagatatgagagaagagagagagagaaagagaagaaatgtaaacaaaaacgcggtgtttcgtggaataatcg  5407300                            --------->KAN4(2)                           <---------MYB46(3)                                                    <---                          <---------WOX13(1)                                                     <---                         <------------CBF                                                    <-------                         >>>>>>>>>ARR2         --------------->AGL15               <------------CBF                        --------->ATHB12       <---------DAG2                     --------->ATHB12                  <----------DOF2              <----------DOF2                   <---------YAB1<-----                ---------->ID1              <-----------GT1                  <----------DOF2---------       <------------CBF<---------YAB1     <----------DOF2  --------->ANAC55(2)   <---------AHL20(2)   gagacgaagcattgtttcggcgtttttgattgttccatgagagtctttactttttttgtttacgcgttcacttactgggctttttaattgggcttacaat  5407400                                               --------->ICU4                                             --------->YAB1                                             <---------ICU4                                            --------->AHL20(2)                                            <---------AHL20(2)                                           <---------AHL20(2)                                        <---------AHL20(1) ------MYB46(3)                         --------->ARR11(3) --------RAV1(1)                        <---------ARR11(3)        ---------->ID1 --YAB1                                 --------->AHL20(1)       <-------GAMYB -------CBF                             <---------AHL20(2)      <---------MYB46(3) --->CBF      <----------DOF2           --------->AHL20(2)      --------->MYB52(2)   tgttgggcttcttaagctttcagtttggagttttgagttgaatatattaattatgtagacttgagtttgttgttttaaaaaatacaaaataatcttatga  5407500                             --------->ARR11(3)                             --------->AHL20(1)                             <---------AHL20(1)                            <---------AHL20(2)                                    --------->CCA1(2)                          <---------------AGL15                                  --------->ARR11(3)                       <---------AHL20(2)      <---------YAB1                    <---------ARR11(3)                      --------->AHL20(2)     <-----------GT1                  <---------TOE2(3)                <-----------GT1  ----------->GT1        <-------TEIL         ---------->DOF2 xxxxxxxx   aatctaaaatagcctattttgcaattttatatatattgtaaatgttttcacgattacatacatttgtttttaaaacttttaaagatatacttgaactctt  5407600                       --------->AHL20(2)                   --------->AHL20(1)                   <---------AHL20(1)                   --------->AHL20(2)                   --------->ARR11(3)                   <---------ARR11(3)                                                         <------                   <---------AHL20(2)                                                        <-------               <---------AHL20(2)                           <---------ARR11(3)               --------              --------->AHL20(2)                            --------->ARR11(3)              ---------       --------->ARR14(2)                             ----------->GT1       <---------AHL20(2)<------       <---------ARR14(2)     --------->YAB1        --------->MYB52(1)<---------ANAC46     <---------YAB1 xxxxxxxx>smallRNA(s) <---------AHL20(2)     <---------YAB1 --------->GLK1(2)         <-------TEIL   catctcgaggttccgatttaatatattatttatcaaaattttaaaatttgatagtaacgaaaaatctatattgtgtattattttgaaattcatatgatat  5407700                                                           <---------AtLEC2                      ---------->DOF2                <---------AHL20(2)             ------>ZmHOX2a(2)                     <---------RVE1(1) <-----------------AGL3--------->DAG2             <---------ARR14(2) ---CCA1(1) --------->At4g35610                   --------->ARR14(2)                              <-- --ARR11(3) <---------At4g35610                   --------->ARR11(3)        --------->DAG2    <------ ->ARR11(3)--------->ARR14(2)                     <---------ARR11(3)       ---------->DOF2 ---------- >YAB1     <---------AGP1  ----------->GT1       <------ZmHOX2a(1)   <----------DOF2  <xxxxxxxxxxxxxx ---RVE1(1)<---------ARR14(2)                  <---------TOE2(3)<-----------GT1   <---------ZAT6  <--   tttgcattttttggatctgaagaataaagttgtaaaaatagacgagtttgaggatttttttgcataaaacccttttaaaaagtagagtttagatggtttt  5407800  Previous    Next  AGI:  At4g08500.1    Description:  MEKK1 (MYTOGEN ACTIVATED PROTEIN KINASE KINASE); DNA binding / kinase/ kinase binding. Identical to Mitogen-activated protein kinase kinase kinase 1 (MEKK1) [Arabidopsis Thaliana] (GB:Q39008;GB:O81470;GB:Q39020;GB:Q8W4N5); similar to MAPKKK9 (Mitogen-activated protein kinase kinase kinase 9), kinase [Arabidopsis thaliana] (TAIR:AT4G08480.1); similar to MAP3K beta 1 protein kinase [Brassica napus] (GB:CAA08997.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPr Range:  from: 5403750    to: 5407298    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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