Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ANAC58                ----------->GT1                                                    <---------GLK1(2)      <---------TOE1(3)                                               ------>ZmHOX2a(1)             -      <---------TOE2(3)                                              --------->TOE2(3)              <  <----------DOF2      ---------->DOF2    <-----------GT1            --------->TOE1(3)    <----------DOF2 -->ICU4        --------->ANAC58    ------->TEIL             <----------DOF2--------->GLK1(1)      --   tgttctttaaggtaagacaagaaaaaaaagatagcatgaacattttacatctcttgaaggcacctttgattccttaagaaatctagattcttcttttctc  2753200                                                                                       <---------ABI4(2)                                                                                       <---------ZAT18                                                                                       --------->ZAT18                                                                                       --------->ZAT14                                                                                       <---------ZAT14                                                                                       --------->ABI4(2)         <---------YAB1                                                            ------>ZmHOX2a(2)      <---------YAB1                                                               <---------DEAR3(1)    <---------ICU4                                                                <------ZmHOX2a(2)    --------->YAB1                                                               --------->ARR11(3)    -------->HAHB4                                                               <---------ARR11(3)   <---------ATHB51                                                              --------->ARR14(2)   --------->ICU4                                                                <---------ARR14(2) -------->AHL20(2)                                                           ---------->DOF2 <------- ---------AHL20(2)  --------->ANAC58            --------->ANAC58            --------->AHL20(2) ------->AHL20(2)   --------->ANAC58            --------->ANAC58            <---------AHL20(2)   atttaattatggtcattgtaacaagtaaacacacattacatctcttgctcaagcctctctatcaattggtcatcaaatttaaagatcggtgcaccgtttt  2753300             <---------YAB1             <---------TOE1(3)                  --------------->AtSPL8          <---------YAB1         --------->GLK1(2)                      <---------ICU4       ---------->ID1   <---------AtMYB61       --------------->AtSPL3  --------->YAB1   <---------ANAC58<---------ANAC55(2)          <---------------AtSPL8 <---------ATHB12   <---------ANAC58--------->ANAC55(2)    --------------->AGL15      --------->WOX13(1)             < --MYB52(1)  <---------TOE2(3)  <---------GLK1(2)                  ------------>CBF      ------------   gtaaggcttgttcttatggttatgtgatggtctagattctttctcccatttaagtacaagttttctatattcaatcatcaaaaaatgagaacacaatttt  2753400                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                         <---------YAB1                                                                                         <---------ATHB12                 <---------ANAC58               --------->YAB1                           --------->ICU4         <----------DOF2                       <---------ATHB12                   --------->AHL20(2)         <---------DAG2                     >>>>>>>>>GT-1              <------------CBF--------->YAB1 ---------CCA1(1)<---------ANAC58         --------->At5g28300   --------->HSFB2a(2)   <---------AHL20(2) >CBF <-----------GT1                    ----------->GT1   <<<<<<<<<TBF1          <---------AHL20(2)   ggatatttctactttttttgcttctactaaacttcttctctcaaggtaaatcatcgtattcttcttctctaactattgaaaaatataaataatcattctc  2753500                                              --------->ARR11(3)                                              <---------ARR11(3)                                              --------->AHL20(1)                  <---------ICU4    <---------MYB46(3)               --------->YAB1       <------MYB83              <---------YAB1        <------MYB46(1)             <---------AtLEC2             --------->AHL20(2)  <---------MYB52(1)         --------->At4g35610            --------->YAB1     <---------ANAC58             <---------At4g35610   <------ZmHOX2a(2)     <-----------GT1           <---------ANAC46         --------->ALFIN1      <---------------------WRI1 <---------MYB52(1)            <---------ANAC58   ------------>CBF        --------->YAB1   tctgttttttcaaattataatctttgttttgtttcgtttggttcgatatatattcaatgtgtagctgcaaggccagtgatgacgatcagaccagagtcac  2753600                                                             --------->ALFIN1                                                            ------->PIF5                                                           <---------ZAT2                                                           --------->ZAT2                                                         ===================RAV                                                   <---------ANAC58                                                   <---------ANAC58                                              --------->ALFIN1         <---------ZAT2                                              <---------ANAC46         --------->At4g35610    <------                                              <---------ANAC58         --------->ZAT2       ---------                                              <---------ANAC58  ----------->RAV1(1)        <---------YAB1                                              <---------AtLEC2<-------TEIL             --------->ARR11(3)                                             <-------TEIL<-----------RAV1(2)--------->At4g35610                  --------->ANAC46           <---------MYB46(3)----------->HVH21 ---------->DOF2      ----------->RAV1(1)                   <---------ANAC46<-------PIF5    <---------At4g35610   tagtagggccacaagggaacacgacgttcttggagggaacaacatggtgcgtggctagaccaggtgcgacacaagctgagctacaaagagctcttgattg  2753700                                                                 --------->ANAC58                                                              --------->ARR14(2)                                                              <---------ARR14(2)  <-------MYC3                                           ------->TEIL               <----------DOF2  <-------MYC2                                           --------->MYB52(1)   --------->ANAC58  ------->MYC3                                      <-----------GT1    <---------CCA1(2) <---------ANAC58  ------->MYC2                                   <---------MYB46(3)  ------>ZmHOX2a(2)   <---------ANAC58 --------->ALFIN1    <---------WOX13(1)         <---------WOX13(1)  <------ZmHOX2a(2)    <---------ANAC46 ---WOX13(1)     <--------P  <---------ATHB12<---------YAB1 --------->LBD16   --------->ANAC58 >ATHB12       ----------->GT1--------->ATHB12<---------MYB46(3) --------->ANAC58------->TEIL   ggcatgtgggattgggagggtagattgctcagtcattgagagacatggtgattgttacgaaccggacacgatcgtatcgcatgcatcttttgcgtttaat  2753800                    <---------HSFB2a(1)                    --------->KAN4(1)          --------->MYB46(3)        ------>MYB46(1)        <---------ANAC46                                        ----------->GT1        ------>MYB83--------->MYB46(3)    <---------ANAC46                     ----------->GT1      <---------MYB46(2)       <---------ANAC58       <-------TEIL      --------->TOE2(3)--------->DOF5.7(2)      <---------MYB59          <---------ANAC58    --------->At4g35610 --------->ZAT6 --------->DAG2   <-----------GT1 <---------KAN4(2)     <---------DEAR3(1)          <-----------GT1  <---------TOE2(3)   gcatattaccaaaccaatgggaacaatcgcattgcttgttacttcggtggaacagctacattcaccaagattaaccctagtaagtaaaaaggttaactta  2753900          <-----------GT1       -------->ATHB1       <--------HAHB4                                         -------->ATHB1                        -       <---------AHL20(2)                                     --------->YAB1                        <       <---------ICU4                                         --------->ATHB51                    ---       --------->ATHB51              --------->ARR11(3)      <---------YAB1                       <--       --------->AHL20(2)    <---------ANAC58        --------->HSFB2a(2)                       <-----      --------->ICU4         <---------ANAC55(2)     <---------HSFB2a(2)                      -------      <---------ATHB51       <---------ANAC46   <---------ANAC58                           ------>ZmHOX2a(1)      <---------ATHB12       <---------ANAC58   <---------ANAC58      --------->YAB1   <-----------GT1   catatgcaattatttctattcggatagtatttcgtaagagataatcgatttcttactcgaactattattgtattatactttgaaacatttttcctactaa  2754000                                                                                      --------->LBD16                                                                                     --------->ANAC58                                                                                     <---------ANAC55(2)                            <---------AHL20(2)                                       --------->ANAC58                            --------->AHL20(2)                                  --------->ANAC58                            <---------AHL20(1)                                  --------->ANAC46 -------->ANAC55(2)    <---------AHL20(1)                                       --------->ANAC58 ---------ANAC55(2)    <---------AHL20(2)                                 <---------ANAC58 ------>AHL20(2)       --------->AHL20(2)        <---------ANAC55(1)      <---------ANAC58 ---------GT1  <---------TOE2(3)             --------->YAB1               <---------ANAC46 ----ICU4      <---------TOE1(3)       ----------->GT1               <-----------RAV1(1)          --- -->ICU4      ---------->DOF2       <---------AtLEC2    <XXXXXXXXXXXXXXXXXXXMIR172B*<---------LBD16 <   ttacataatcaatttttaaagttattttattttatttttcatggtaatattaagtgtgaatttttgtgatgttgttgcttgcaggctacggaaaatgctc  2754100  Previous    Next  AGI:  At4g05430.1    Description:  similar to glucan endo-1,3-beta-glucosidase-related [Arabidopsis thaliana] (TAIR:AT1G09460.1); similar to hypothetical protein OsI_024013 [Oryza sativa (indica cultivar-group)] (GB:EAZ02781.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 2753579    to: 2754417    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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