Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                            ---------                                                                                            ---------                                                             --------->ANAC58               <--------                                                             --------->ANAC58    --------->MYB52(1)                                                          <---------ARR14(2)     <---------ALFIN1                                                      --------->ANAC46          --------->MYB46(3)                                                      <---------ANAC55(2)      --------->DEAR3(2)                                                      --------->ANAC55(2)      --------->TCP15(2)                                                      --------->ANAC58        --------->PCF2-------->ATHB1                                             --------->HSFB2a(2)              <---------TCP15(1)                                   --------->ANAC58--------->ARR14(2)         <---------TCP20                             ---------->DOF2 <---------HSFB2a(2)             <---------PCF2<---------YAB1                     ---------->DOF2         <---------HSFC1(1)              --------->TCP15(1)                  <----------ID1   --------->ANAC58<---------ARR14(2)     --------->ALFIN1 <---------ATHB12                 ------------------------>ANAC81   --------->TOE1(2)    <---------ANAC46   --------->ICU4                --------->DAG2--------->DAG2 --------->HSFC1(1)       <---------ZAT14      <---------ATHB51         <----------ID1----------->GT1   --------->GLK1(1)--------->ARR14(2) --------->TCP20<--------ATHB1 ---------->GT1---------->DOF2<---------------AtSPL8  --------->ANAC58--------->ZAT14   ------------>ATHB5   aatggcaaaaaaaaacaaaaaggaaaagaaataaagcacgaagaattctagaaaatacgaaatacgcttcaatgcagtgggacccacggttcaattattg  2717800                                                                    <-------GAMYB                                                                    --------->TOE2(3)                                                                    --------->TOE1(3)                                                                   <---------MYB46(3)    ------>ZmHOX2a(2)                                                                ------->GAMYB          --------->ARR11(3)                 --------->ARR14(2)                            --------->MYB46(3)      --------->ARR14(2)       --------->At4g35610                                   --------->MYB52(1)        <---------ARR14(2)       <---------ZAT2                                     --------->YAB1        --------->MYB46(3)   <-----------GT1    <---------AHL20(2)             --------->AHL20(2)       --------->MYB52(1)<---- >ATHB12         <---------ARR14(2)              --------->AHL20(2)------>ZmHOX2a(2)   <---------ARR11(3) >ATHB51   <---------ALFIN1                    --------->AHL20(2)  ----------->GT1     <---------AGP1 >YAB1 --------->ZAT2 --------->AHL20(2)       <---------AHL20(2) <------ZmHOX2a(2)   <---------CCA1(2) -ICU4 <---------At4g35610         --------->TOE2(3) <---------AHL20(2)    --------->TOE2(3)    -----   ccaattttcagctccaccgtatatttaaaaaataaaacgataatgctaaaaaaatataaatcgtaacgatcgttaaatctcaacggctggatcttatgac  2717900                                                                   ===============================bZIP_DOF                                                                   --------->TGA1a                                                                   <---------O2                                                                   <---------TGA1a                                                                   ===============================bZIP_DOF                                                               --------->ANAC58                                                               <---------ALFIN1                                                               --------->ANAC58                                                            <------NtERF2                                                           <---------RAP2.6(3)                                                           <---------ATERF1(1)                                                           --------->LBD16                                                          <---------ATERF1(2)                                                          --------->ATERF1(2)                                                          --------->ANAC46                                                          --------->RAP2.3(2)                                                          --------->RAP2.6(2)                                                         --------->ATERF1(1)                                                        <---------ATERF1(1)                                                        ------>NtERF2                                                        --------->ZAT2                                                 <---------MYB46(3)--------->O2                                            ---------->DOF2------>NtERF2                   --------->ETT(2)       <------NtERF2 <---------ZAT2  <---------ANAC58                   <---------ETT(2)      <-----------HVH21--------->DEAR3(1)                <---------MYB46(3)       ------>NtERF2  <---------At4g35610             <---------MYB46(3)         <---------ANAC46--------->At4g35610    <-----------GT1  <---------MYB52(1)                 --------->ANAC46--------->At4g35610<---------ANAC58            < <-------GAMYB<-------GAMYB        --------->MYB52(1)<---------At4g35610<---------ANAC46            < -----ETT(2)<---------TOE2(3)  --------->YAB1   --------->ALFIN1 --------->ANAC46  --------->At4g35610 ---->ETT(2)<---------YAB1  ----------->GT1 =================================bZIP_DOF  ---------->DOF2   gaccgttagaaattgtggttgtcgacgagtcagtaataaacggcgtcaaagtggttgcagccggcacacacgagtcgtgtttatcaactcaaagcacaaa  2718000                                                                            --------->AHL20(1)                                                                            <---------AHL20(1)                                                                            <---------AHL20(2)                                                                    <-------MYC2                                                                    ------->MYC2                                                                    <-------MYC3                                                                    ------->MYC3                                                                    <-------MYC4                                                                    -------->ABF1                                                                    ------->MYC4                                                                   --------->TGA1a                                                                   --------->O2                    --                                                                   <---------O2<---------YAB1     ---                                                                   <---------TGA1a                ---                                                         ------->GAMYB      --------->AHL20(2)  <----                    --------->DAG2              --------->REM1(2)  --------->ANAC46            <-----           --------->TOE1(3)                 <---------ANAC46      ==================================           --------->TOE2(3)                 <---------ANAC58      ==================================           <---------MYB59                   <---------AtLEC2      ==================================      ------>ZmHOX2a(1)                      <---------ANAC55(1)   <---------ANAC55(2)       <-------     --------->TOE2(3)  --------->WOX13(1)   <---------ANAC58      --------->ANAC55(2)      <-------- ----------DOF2     <---------TOE2(3)    ====================================bZIP_DOF       <-------- ---------DAG2  --------->YAB1           <----------DOF2 ====================MYC_MYB    <------------CBF   tacttttcctcaacctaaaaataaggcaattagccaaaaacaactttgcgtgtaaacaacgctcaatacacgtgtcattttattattagctattgcttca  2718100       <----------DOF2 <---------DAG2 <----------DOF2 ---->NtERF2 ------>DEAR3(1) ------>DREB2C(2) -----At5g28300 ----ALFIN1 ===========bZIP_DOF                                                *TSS ===bZIP_DOF                                      --------->HSFB2a(2)  <---------ARR11(3) =================bZIP_DOF                <<<<<<<<<TBF1 ------------>CBF      <<<<<<<<<TBF1 ---DOF2      ----------->HVH21        <<<<<<<<<TBF1----------->TBP---------->DOF2 -ANAC58    --------->O2         <----------DOF2  <---------HSFB2a(2)  --------->ARR11(3) -ANAC58    <---------O2    ------>ZmHOX2a(1)<<<<<<<<<TBF1       ---------->DOF2             --------   ccgccttagctttctcgtgacctagtcgtcctcgtcttttcttcttcttcttctataaaacaatacccaaagagctcttcttcttcacaattcagatttc  2718200                                                                               --------->ARR14(3)                                                                               <---------ARR14(3)                                                                               --------->ARR14(2)                   <----------DOF2                                             <---------ARR11(3)          --------->TOE2(3)                      --------->At5g28300           --------->GLK1(2)        <---------ARR11(3)                      ----------->GT1                --------->ARR11(3)        --------->GLK1(2)                      <---------TOE2(3)  ------>ZmHOX2a(1)                <-        --------->ARR11(3)             <---------ANAC58          --------->TOE2(3)              <---- ->GLK1(1)--------->TOE1(3)            <---------ANAC58    --------------->AtSPL8               <----   aatttctcaaaatcttaaaaactttctctcaattctctctaccgtgatcaaggtaaatttctgtgttccttattctctcaaaatcttcgattttgttttc  2718300                                                                                        --------->TOE2(3)                                                                                   --------->ARR11(3)                                                                                  <---------GLK1(1)               --------->ARR14(2)                                                <---------ARR11(3)               <---------ARR14(2)           --------->TOE2(3)                <---------MYB52(1)            <---------ANAC46         ----------->GT1                        --------->TOE2(3)   <------ZmHOX2a(2)              --------->GLK1(2)                         <-------GAMYB --------TOE1(2)       <----------DOF2 <---------MYB52(1)                  <---------MYB46(3) -----ANAC58<---------ANAC58     <---------GLK1(2)                         ------>ZmHOX2a(2) -----ANAC58<---------ANAC58   ----------->ARR10                <---------LBD16  --------->ARR11(3)   gttcgatcccaatttcgtatatgttctttggtttagattctgttaatcttagatcgaagacgattttctgggtttgatcgttagatatcatcttaattct  2718400                                                                                                -----                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                       --------->CCA1(2)                                                                                      --------->ARR11(3)                                    --------->AHL20(2)    <-----------GT1             <---------AGP1                --------->ARR11(3)  --------->AHL20(1) --------->ATHB51               --------->AGP1               <---------GLK1(1)    <---------AHL20(2) <--------HAHB4                 <---------ARR14(2)              <---------ARR11(3)   <---------ATHB51    --------->YAB1                 --------->ARR14(2)              --------->ARR11(3)   <---------ATHB12    <---------ICU4                 <---------ARR11(3)   <---------TOE2(3)               <---------AHL20(2) --------->AHL20(2)          <-----------------AGL2   <---------TOE1(3)               --------->AHL20(2) --------->ICU4       --------->GLK1(1)<--------   cgattagggtttcatagatatcatccgatttgttcaaataatttgagttttgtcgaataattactcttcgatttgtgatttctatctagatctggtgtta  2718500                                                              <----------DOF2                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                           --------->ARR11(3)                                                           <-----------ARR10                                                           <---------ARR14(3)                                                           --------->AGP1                                                           <---------AGP1                                                           --------->ARR14(3)                                                           <---------ARR11(3)                                                       <-------TEIL                       --------->MYB46(3)                                                    --------->At4g35610                 --------->WOX13(1)                       ---------->ID1           --------->MYB52(1)                ---------->DOF2 ---->MYB52(2)<------ZmHOX2a(2)               <---------WOX13(1)                --------->LBD16 -ZAT6    <---------ZAT18                  <---------YAB1 <---------CCA1(2)   <---------LBD16   gtttctagtttgtgcgatcgaatttgtcgattaatctgagtttttctgattaacagatgcagatctttgttaagactctcaccggaaagacaatcaccct  2718600                                            --------->LBD16                                           <-----------RAV1(2)                                           <---------LBD16                                         =============================HOX2a_HOX2a                  --                                         <------ZmHOX2a(2)              --------->ZAT2             --                                         ==================HOX2a_HOX2a<-----------RAV1(2)      ------                                         --------->CCA1(2)          <---------ARR14(2)         ------                                        --------->ARR11(3)          --------->ARR14(2)       --------                                        <---------ARR11(3)        --------->LBD16           <------NtERF2                ------>NtERF2           --------->ARR14(2)       --------->HSFB2a(2)       ------>NtERF2             ------>NtERF2              <---------ARR14(2)      <---------LBD16            --------->ANAC58            <---------ETT(1)            --------->AGP1         ------>ZmHOX2a(1)          --------->ATERF1(2)            --------->ANAC46     <----------ID1         <---------ZAT18 --------->At4g35610--------->LBD16            ----------->HVH21  ---------->DOF2      <------ZmHOX2a(1)<------ZmHOX2a(2)    <---------ATERF1(2)       <---------HSFB2a(1)   --------->DOF5.7(2)    ========================HOX2a_HOX2a   --------->DEAR3(1)       --------->HSFB2a(1)  --------->TOE1(3) <------ZmHOX2a(1)=============HOX2a_HOX2a  <---------LBD16     ---------->DOF2        --------->TOE2(3) ==============================HOX2a_HOX2a <---------RAP2.3(1)  --------->ALFIN1   <---------ETT(2) ----------->ARR10 --------->ZAT18 <---------At4g35610--------->ANAC58   cgaggtggaaagctccgacaccatcgacaacgttaaggccaagatccaggataaggagggcattcctccggatcagcagaggcttattttcgccggcaag  2718700  Previous    Next  AGI:  At4g05320.1    Description:  UBQ10 (POLYUBIQUITIN 10); protein binding. similar to UBQ4 (ubiquitin 4), protein binding [Arabidopsis thaliana] (TAIR:AT5G20620.1); similar to predicted protein [Ostreococcus lucimarinus CCE9901] (GB:XP_001420612.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71997.1); similar to polyubiquitin [Triticum aestivum] (GB:ABU40645.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 2718168    to: 2720130    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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