Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->TOE2(3)                                                                                           --------->TOE1(3)                                                                                      <----------DOF2                                                                                      <---------DAG2            --------->ANAC58                                                    --------->ANAC58            --------->ANAC58                   <---------TOE1(2)                --------->ANAC58   ------>MYB83                               ------>ZmHOX2a(1)                 <---------ANAC55(2)   ------>MYB46(1)    --------->ANAC58       --------->TOE2(2)                  --------->ANAC55(2) <---------MYB59  <----------DOF2    --------->TOE1(3)        --------->YAB1    --------->ANAC55(1) ---------------->AGL1--------->ANAC58       --------->TOE2(3)--------->ATHB12  --------->ANAC46 ---------------->AG---------->DOF2  --------->TOE2(3)       <---------ATHB12   ----------->GT1    <-   ctaccaaattagacaaacaactttaagcaaaaacaaaaaccctaaatcctaagttttgatcaaatcatagggaacaaaaaaaacgtaactttaccttgaa  2519600                                                       ------>ZmHOX2a(1)                                                  --------->KAN4(2)                                                 --------->HSFB2a(1)                                                 <---------HSFB2a(1)                                            <---------LBD16                                            <-----------RAV1(2)                     ----------->RAV1(1)<---------ARR11(3)                <---------ZAT2          --------->ARR11(3)                --------->ZAT2--------->ANAC58  <---------ARR11(3)--------->TOE2(2)                --------->At4g35610    <---------GLK1(1)          --------->TOE2(3)         --------->ANAC46     --------->ANAC58 <------ZmHOX2a(1)  --------->TOE1(2)        ---------->DOF2 ------->GAMYB  --------->GLK1(1)  <---------At4g35610        --------->MYB52(1)  --------->ANAC58 --------->At4g35610 <---------RVE1(1)  --------->ZAT2 ----------->GT1          ---  --------->ANAC58--------->RAP2.6(2) --------->ARR11(3)  <---------ZAT2----------->GT1 ------->GAMYB ---------ID1   <---------At4g35610   <---------ARR11(3)  --------->At4g35610        --------->YAB1 -   gaagacgaaataaggcacagcagcaacagagtaagcctcagatatctcaggatgttcctcagcttcaacctaagaagataaaaccaataacagtcaaaaa  2519700              <---------AHL20(2)             --------->AHL20(2)          ----------->GT1                       --------->TOE2(3)         ----------->GT1                      ------->TEIL             --------->GLK1(1)     ---------->DOF2                <---------ZAT14---------->DOF2     <---------GLK1(1) ------>TOE2(3)             --------->WRKY18(1) --------->TOE1(3)<-------PIF5 -------->ATHB12       XXXXXXXXXXXXXXXXXXXX>MIR3440B-3P          ------->PIF5   cctcattgaaagtgataaaattttgaattggtcaagagaacagagacgaaccctaaagaagtgagcacgagggaaatcagtagcgagatgagagaaaact  2519800                                                           ------>NtERF2                                                          --------->DEAR3(1)                                                          --------->RAP2.3(2)                                                         <------NtERF2                                                         --------->ATERF1(1)                                                         --------->DEAR4(2)                                                         --------->ORA47(2)                                                         --------->RAP2.3(1)        ------>NtERF2                                                        <---------ATERF1(1)         --------->LBD16                                                        <---------RAP2.3(1)     --------->ARR14(2)                                 <-----------RAV1(2)  --------->SPL7            <---------ARR14(2)                     --------->ANAC46             <-----------RAV1(1)          --------->ZAT2     <--                 <-----------HVH21            --------->ANAC58        --------->ANAC58           ----                --------->YAB1   <---------HSFB2a(2)  --------->ZAT18 --------->ANAC58 <----------DOF2       --------->At4g35610       =============================RAV   <------NtERF2  <---------ALFIN1    <---------At4g35610    ---------->DOF2    --------->ANAC58    <---------ANAC46 --------->DEAR3(1) ------>ZmHOX2a(2) <---------ALFIN1     ---------->DOF2<---------DEAR3(1)      <---------ZAT2    <---   tgatccatctgcttcgaagcatcacaccaagaagcccagaagtgaagcacgactggtgcgccgctctggcgcaagttatcaagctccgcctttgaaacga  2519900                                                 <----------DOF2                                                 <---------DAG2             <---------At4g35610              --------->ZAT6          --------->SPL7               ------>ZmHOX2a(2)        <---------ZAT14               --------->GLK1(1)                     <---------AHL20(2)        <---------SPL7                <------ZmHOX2a(2)                     --------->AHL20(1)        --------->ZAT14               <---------GLK1(1)                     --------->AHL20(2)  ------>ZmHOX2a(1)                  --------->ARR14(2)                     <---------AHL20(1) --------------------->WRI1          <---------ARR14(2)                    *TSS --------->TOE1(3)                   --------->ARR11(3)              <-----------GT1 --------->TOE2(3)                   <---------ARR11(3)         <---------YAB1 -------ARR11(3)                    <------ZmHOX2a(1)         <---------ANAC46                      < ----->GLK1(1)                     <---------HSFC1(2)         ----------->GT1              --------->ARR14(2) ------GLK1(1)                     --------->HSFC1(2)      <-----------RAV1(1) <---------YAB1      <-   tatccttcaccgtaccgctcatcttcgaagagggagaaggatctcttaacactttttttttgtgttgtgatttaccaatttattatcgagcagaatacac  2520000                                                     ------>MYB83                                                     ------>MYB46(1)                                                     --------->MYB52(1)                                                    --------->MYB55(1)        --------->ZAT18          ---------->DOF2                          <---------MYB46(2)         <---------ZAT18    <---------ANAC58                               <---------MYB59<---------TOE2(3)    <---------ANAC58               <-----------GT1 <---------MYB52(2)       <---------ZAT18    <---------ANAC46        --------->AHL20(2)     <---------MYB111(1)     <---------ANAC58 -------GAMYB ---------->DOF2   --------->YAB1  <------ZmHOX2a(1) <---------TOE1(3) ----------RAV1(1)       <---------TOE2(3)  ---------->DOF2------------>CBF<---------ANAC58   tctgttgctggagaaagaaaggagatttatgtaaatataacaaaataaaaggacctaacgatacaattagggtttttgtgtgcccaatgtgatgctaaaa  2520100                         --------->AHL20(2)                         <---------AHL20(2)                                               --------->TOE2(3)                        --------->YAB1                 ----------->GT1          --------->MYB59                       <---------------AGL15     <------NtERF2 --------->AHL20(1)         -----------                       --------------->AGL15     --------->At4g35610        --------->ANAC55(2)                 <----------DOF2                 <---------LBD16            <---------ANAC55(2)          <---------AHL20(2)                     <---------At4g35610      --------->AHL20(2) --------        <---------ANAC55(2)           <---------AHL20(2)       --------->AHL20(2)        ----------->GT1        --------->ANAC55(2)   ----------->GT1<-----------HVH21 <---------AHL20(2)----------->GT1 <---------ZAT18 --------------->AGL15--------->AHL20(2)      --------->AHL20(2)<---------TOE2(3)----   ttgctcacttatgtaatttctttttataaaaatagtaaaattatatatgtcagcggaaggaaaaaaaaattggaaattaagtaaggtaaaaatgttaaaa  2520200                                        --------->AHL20(1)                               --------->ICU4                          --------->DAG2                            <---------AHL20(2)                        ---------->DOF2                            --------->AHL20(2)                   <---------------AGL15       --------                           <---------AHL20(1)                    --------------->AGL15       --------                        --------->AHL20(2)            --------->AHL20(2)                   --------->ARR11(3)                        <---------AHL20(2)            <---------AHL20(2)                   <---------ARR11(3) >GT1                   --------->AHL20(1)       <-------TEIL --------->ZAT6            <---------AHL20(2) ->AHL20(2) --------->GLK1(2)--------->AHL20(2) --------->CCA1(2)==================================== ----->GLK1(2)       --------->YAB1     <---------AHL20(1) --------->AHL20(2)           --------->AHL20(2)   ttctaggtgataacaatctttaaaaataaaataattttgaaaaatattagatacatttaaattaaaactactaaaagtaagtttgactaataaaatctta  2520300                                    <------ZmHOX2a(1)                            <---------ICU4                           <---------------AGL15                           --------->ICU4                     --------->AHL20(2)                     <---------AHL20(2)                                                           <--     <---------AHL20(2)  --------->YAB1                            <---------ARR14(2)        <------MYB83 ------>ZmHOX2a(1)  --------->AHL20(2)                             <---------GLK1(2)         <------MYB46(1) ->TOE2(3) <----------DOF2 --------------->AGL15  --------->WOX13(1)   <---------YAB1        -------- ->YAB1 <-----------GT1 --------->ZAT6  ----------->GT1------>ZmHOX2a(1)--------->YAB1      --------- ==========================================MADS_MADS --------->YAB1--------->ARR14(2)       <--------   atcctatttttttctttctaaaattaatactaattagaggaattgtatatatcaatcctcatcgaattggattctcataaaacagtctaagaattaggtt  2520400                                                                      <---------YAB1                                                                     --------->AHL20(1)                                                                    <---------ICU4                                                                    --------->ATHB51                                                                    -------->ATHB1                                                                    <--------HAHB4                                                                    --------->YAB1                  -    <----------DOF2                             <---------MYB52(1)  --------->AHL20(2)             <- -------YAB1                            --------->AHL20(2)          <---------AHL20(2)          ----- --->GT1                                <---------AHL20(2)         <---------ATHB51             <---- >MYB59        <----------DOF2      ----------->GT1    <---------AHL20(2)<-----------GT1        <---- -TOE2(3)<-----------GT1    --------->ALFIN1  ----------->GT1      --------->ICU4               -----   acaattctttttttctcctttgttttgtatgtgtggaattgtttaattctgttatattaaaaatccacaattattttagcatttgtatttttagttattt  2520500  Previous    Next  AGI:  At4g04950.1    Description:  thioredoxin family protein. Identical to Monothiol glutaredoxin-S17 (GRXS17) [Arabidopsis Thaliana] (GB:Q9ZPH2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G32580.1); similar to hypothetical protein OsI_033059 [Oryza sativa (indica cultivar-group)] (GB:EAY79100.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Glutaredoxin-related protein (InterPro:IPR004480); contains InterPro Range:  from: 2517664    to: 2519975    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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