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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                    --------->ZAT14
 ----------->GT1                    <---------ZAT18                                 <---------RVE1(1)
<-------MYC3           --------->ALFIN1                                        --------->ANAC55(2)
------->MYC3         --------->ALFIN1                    <-----------GT1       <---------ANAC55(2)
----TEIL             <-----------RAV1(1)         ----------->GT1  <---------HSFB2a(2)
 
acatgtgtaaaatttttgttaacagtgttgggcaaacagtgcaaaatgaagagagtgaattaacaagttttcgaagcatatcaagtgatatttttgttta  2459500
                                                                                      <xxxxxxxxxxxxx
                                                                                      --------->At4g35610
                                                                                  --------->ANAC58
                                             --------->YAB1                       --------->ANAC46
                                 <---------ANAC58                                 --------->ANAC58
                                 --------->MYB52(2)   <-------TEIL             <---------ATHB12
                                 <---------ANAC58 <---------TOE2(3)          --------->WOX13(1)
                        <---------TOE1(2)  --------->AHL20(2)        <---------At4g35610       <----
                        <---------TOE1(3) --------->YAB1             --------->ZAT2   <---------At4g35610
                        <---------TOE2(3) --------->AHL20(2)         --------->At4g35610       -----
         <------ZmHOX2a(1)   <---------MYB46(3) ---------->DOF2      <---------ZAT2 xxxxxxxxxxxxxxxx
 
tatgagttttgaggactgacttcgtctaaggtttgttcgtggcaataaaaataaaggttcgagttttttgggagctgagacaatcacgcagatgtctgag  2459600
       --------->KAN4(2)                                                              <---------TOE1(2)
      --------->KAN4(1)                                                               <---------TOE2(2)
      <---------KAN4(1)                                                            --------->YAB1
    <---------GLK1(2)                                                              --------->ATHB12
xxxsmallRNA(s)                                                                    <---------YAB1
-----At4g35610                                              <----------DOF2       --------->ICU4
---->At4g35610          --------->KAN4(2)               <----------DOF2     ---------->ID1
>smallRNA(s)       --------->ICU4           --------->GLK1(1)   ---------->ID1    <---------ATHB12
 
cttcacagattattctcagacaatgtttattcttcaaacgactactgatatcgtttgtgctttctttgtagtattttttgttgtaatcataggtttttta  2459700
                                                            <----------DOF2
                                                            <---------DAG2
                                                     <---------YAB1                   --------->ZAT6
                                                   --------->AHL20(2)        <------------CBF
                                               --------->AHL20(2)          --------->ARR11(3)
                          <-----------GT1     --------->AHL20(2)           <---------ARR11(3)
         --------->ARR11(3)          --------->YAB1--------->YAB1          --------->ARR14(2)
         <---------ARR11(3)  <----------DOF2  <---------AHL20(2)           <---------ARR14(2) ------
 
gttttagttatagattttagttttctgtttttcttttctaaaatgatatataaattataaatactttttttgttatcagatattgtttaagactcgaccc  2459800
                                                          --------->ATHB12
                                                         <---------YAB1
                                                 <-------MYC3
                                                 <-------MYC2
             --------->YAB1                      ------->MYC3
          <------------CBF                       ------->MYC2                  --------->AHL20(2)
        <-------TEIL                             ------->PIF5                  <---------AHL20(2)
   <---------YAB1                                <-------PIF5                *TSS
   ----------->TBP                              --------->ANAC58         --------->ANAC55(2)
 --------->AHL20(2)               <---------At4g35610  <---------At4g35610 --------->AHL20(2)
 --------->YAB1           ----------->GT1       --------->ANAC58 <---------ANAC58                ---
----------->AGL3     --------->AHL20(2)         --------->ANAC46 <---------ANAC58               ----
 
aaaattataaatacattgatgaaaaaaaatagtatatagctgatgtaatccacgcgcttgctgattagtcgtgctcatgtaattaaacaaatatcgcaaa  2459900
                                                                                            <-------
                                                                                            <------MYB46(1)
                                                                                            <------MYB83
                                                                         --------->MYB52(2) --------
                                                                        <---------TOE1(2)  <--------
                                                      ------->TEIL    <---------SPL7       <--------
                                                <----------ID1     --------------------->WRI1
       --------->YAB1                   --------->MYB52(1)        <---------ANAC58      <---------ANAC58
      <---------YAB1             --------->ANAC46     --------->GLK1(2)<---------MYB52(1)<-------GAMYB
------>TOE2(3)   <---------AHL20(2)    --------->TOE1(2)          <---------ANAC46      <---------ANAC58
------->GT1      --------->AHL20(2)   <---------MYB52(2)          <---------ANAC58    <---------ANAC46
 
tgttaaactattatacacatataaatttctgtatatacaaaacaaacgaagaagacgaatctctcagtttcgtcgttcgtttcgaagttgtgcgttggtg  2460000
                                                                          <-------GAMYB
                                                                         <---------ANAC58
                                                           --------->At4g35610
                                                           <---------HSFB2a(1)
                                          >>>>>>>>>TBF1    --------->HSFB2a(1)
                                       >>>>>>>>>TBF1       <---------HSFC1(2)        <---------At5g28300
                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------MYB52(1)
    <---------GLK1(1)       --------->TOE1(2)         >>>>>>>>>TBF1      <---------ANAC46
--MYB46(3)                  --------->TOE2(3)   >>>>>>>>>TBF1         --------->GLK1(2)
--->GT1                     --------->TOE1(3)>>>>>>>>>TBF1 --------->HSFC1(2)    <----------DOF2  --
-AtMYB61          <---------ICU4    >>>>>>>>>TBF1  >>>>>>>>>TBF1     <---------GLK1(2)          <---
-DEAR3(1)         --------->ATHB12 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------ANAC58     ------
 
aaatttgaaatctgaatacactcattgcaaaccttagaagaagaagaagaagaagaagaagaagcttccatagattccgttgggcttttactgtgtttga  2460100
                                                                                                 <--
                                                                                                <---
                                                                                              <-----
                                                                                              ------
                                                                                              <-----
                                                                                              <-----
                                                                                             ------>NtERF2
                                                                                             <------
                                                                                             <------
                                                                                             <------
                                                                                             <------
                                                                                            <-------
                                                                                            <-------
                                                                                            <-------
                                                                                            <-------
                           --------->CCA1(2)                                               ---------
                   --------->LBD16                                                       --------->O2
                  <---------ANAC55(2)                                                    <---------O2
                 <---------LBD16                                                         ===========
       --------->ATHB12   --------->ARR11(3)                                             --------->TGA1a
      ------>ZmHOX2a(2)   --------->ARR14(2)                                             --------->ANAC46
     <------ZmHOX2a(2)    <---------ARR11(3)                            <-----------GT1  ===========
    <---------ARR14(2)    --------->ARR11(1)                            --------->ZAT6   ===========
    --------->ARR14(2)  ----------->ARR10                              <---------YAB1    <---------TGA1a
 ------>ZmHOX2a(2)<---------ANAC46                                   --------->YAB1     <---------LBD16
------->ATHB12 --------->ARR14(2)                           --------->At4g35610        --------->MYB52(1)
------WOX13(1) <---------ARR14(2) <-----------RAV1(2)       <---------At4g35610   <---------CCA1(2)
--->ATHB12  <---------YAB1<---------ARR14(2)      ----------->GT1    <---------ICU4   ----------->HVH21
 
ttgatcggatcgattgcgattacggagaagatatggctcaggctgtagaagaatggtataaacagatgccgattatcactcgctcttatctcacggcggc  2460200
     <---------ALFIN1
     --------->DEAR3(1)
     --------->AtMYB61
    --------->MYB46(3)
  <-----------GT1
-----GAMYB                                           <---------ARR11(1)
------MYB46(3)                                       --------->ARR14(2)
----At4g35610                                        --------->GLK1(2)
--->At4g35610                                        <---------ARR14(2)
-NtERF2                                              <-----------ARR10
--GAMYB                                      --------->KAN4(2)
---ATERF1(1)                               <----------DOF2
---MYB46(3)                   <---------ANAC58       ------->TEIL
---RAP2.3(1)    --------->KAN4(2)         <---------ANAC58
---ERF1 --------->DEAR3(1)    <---------ANAC58   <---------HSFB2a(2)
--RAP2.6(2)    <---------HSFB2a(1)    <---------ANAC46
--RAP2.3(3)    --------->HSFB2a(1)    <---------ANAC58
--DEAR3(1)     <----------TaMYB80     <---------ANAC58  <----------DOF2
--RAP2.3(2)   <-----------ARR10   <---------ANAC58  <---------ARR14(1)
>RAP2.6(3)    <---------TOE1(2)   <---------ANAC58  <---------CCA1(2)                             --
=====================MYC_MYB  --------->ANAC55(2)--------->HSFB2a(2)                    <---------TOE2(3)
==MYC_MYB<-----------HVH21   <-------TEIL <---------ANAC46                              <---------TOE1(3)
=====MYC_MYB <-------GAMYB   ------->TEIL <---------ANAC58                  --------->GLK1(2)    <--
 
tgttatcaccaccgtcggatgttccctcgatgtacgtgcttgcttgcttattcgcgaatcttttttggggttctctgaaattctctaaattagggtttca  2460300
                                                                                         -----------
                                    <-----------GT1                                   <------NtERF2
                          --------->ARR14(2)                                   <---------ICU4
                          --------->ARR11(3)                               <---------------AGL15
                          <---------ARR14(2)                               --------------->AGL15
                          <---------ARR11(3)        <---------ETT(1)      ----------------->AGL1
                         <---------CCA1(2)          --------->ANAC46      <-----------------AGL3   -
                     <-----------ARR10           <---------ARR14(2)       ----------------->AG     <
    <---------WOX13(1)<------ZmHOX2a(2)          --------->ARR14(2)--------->ANAC58 <---------ANAC58
 <---------YAB1      <---------ARR11(3) <----------DOF2<---------ALFIN1   <-----------------AGL2<---
------->GLK1(2)      --------->ARR11(3)--------->TOE1(3)           --------->ANAC58 <---------ANAC58
-------GLK1(2)      <---------At4g35610--------->TOE2(3)        <---------REM1(1)   <---------ANAC46
 
tattctgattgtttttgttttgcagatcatatctccatataacctttatttgaatccgacacttgtggtgaagcaataccaatattggcgtctcgttact  2460400
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AGI:  At4g04860.1   
Description:  DER2.2 (DERLIN-2.2). Identical to Derlin-2.2 (DER2.2) [Arabidopsis Thaliana] (GB:Q9ZS88); similar to DER2.1 (DERLIN-2.1) [Arabidopsis thaliana] (TAIR:AT4G21810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22720.1); contains InterPro domain Der1-like (InterPro:IPR007599)
Range:  from: 2459878    to: 2461737    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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