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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                           --------->GLK1(2)
                                                                          <---------ARR14(2)
                                                                          <---------GLK1(2)
                                                                          --------->ARR11(3)
                                                                --------->At5g28300
                            <---------MYB46(3)                 ----------->GT1      --------->ZAT6
                            --------->MYB52(2)               <------NtERF2--------->ARR14(2)
                       ------->TEIL                          --------->LBD16  <---------YAB1
                      <---------AtLEC2                       <---------At4g35610  <-----------GT1
                     <-------TEIL                <-------TEIL--------->At4g35610 --------->ZAT14
--------->GT1   --------->AHL20(2)   --------->YAB1        <---------LBD16<---------ARR11(3)       <
 
aacgaaaatatgttttttataaaatgcatgtttgttactagcatagctcatatacattatggtccgcagtaaaacaagattctgtttactctacttgaat  2417500
                                                                                   --------->YAB1
                           <---------ANAC58                                        <--------ATHB1
                           <---------ANAC58                                 --------->ANAC46
                       <---------ANAC55(2)                                  --------->ANAC58
                       --------->ANAC55(2)                           --------->TOE2(3)     <--------
                       <---------ANAC58                      <---------ARR14(2)   --------->ICU4
 <---------ATHB12      <---------ANAC58                      --------->ARR14(2)   <---------ATHB12
-----------GT1       <-----------GT1                       ------->TEIL     --------->ANAC58
 
ttcaaccatttctcatgttgaaagttacttacttgaacttggacattgaacatatatagatgaatatccaaaacttaacacaccaatgattttagaattt  2417600
                                                                                                   -
                                                                                           -------->ATHB1
                                                                                           ---------
                                                                                           <--------HAHB4
                                                                                           ---------
                                                                                           <--------
                                                                                           <--------
                                                                                           ---------
                                                                                          <---------ATHB51
                                                                                          <---------ATHB12
                                           --------->CCA1(2)                              --------->ICU4
                               <-----------GT1                                      <-----------GT1-
                            --------->ARR14(2)                                  <---------AHL20(2) -
                            <---------ARR14(2)   <---------MYB52(2)       --------->YAB1--------->WOX13(1)
                       <---------TOE2(3) --------->YAB1        <---------ICU4  --------->AHL20(2)  -
                 --------->AHL20(2)     <---------YAB1        --------->ICU4   --------->ICU4     <-
-GLK1(2)         --------->ATHB51     --------->YAB1 --------->ZAT6  --------->LBD16<<<<<<<<<GT-1<--
 
catgtgtctctcttattgcattatttaagaaaatttgccacttatgatatgaactaacaccagtactaattccccaaacatatttattaaccaattattt  2417700
-------->ANAC55(2)    <---------ICU4
>YAB1<---------AHL20(2)    <---------YAB1
>AHL20(2)             --------->YAB1
-AHL20(2)            --------->ICU4                                                  --------->ICU4
-ICU4--------->AHL20(2) <---------YAB1                                          ----------->GT1
>ATHB51       <---------ARR14(2)                                                <---------ANAC55(2)
-------->ANAC58 <-------TEIL                                                    --------->ANAC58
-------->ANAC58--------->CCA1(2)                                                --------->ANAC55(2)
-------->ANAC46--------->ARR14(1)       <----------DOF2                         --------->ANAC58
--------LBD16 --------->ARR14(2)   <----------DOF2                          ----------->GT1   ------
---------GT1  --------->ARR11(1) ---------->ID1                         ---------->DOF2<---------ANAC55(2)
 
tcacgcatttatttgaagattcgaattatgatttttgtcttttcttttgagtaagtttttttttttttttttgaacaaagagtaagtaatacttaaaaac  2417800
                                                                                                  --
                         --------->YAB1         ---------->DOF2                                  ---
                    <----------DOF2         --------->TOE1(3)                                    ---
                    <---------DAG2          --------->TOE2(3) --------->GLK1(2)           <------ZmHOX2a(1)
                 <-----------GT1           <---------YAB1  ------------>CBF            <-----------RAV1(2)
           <---------AHL20(2)        <---------YAB1  ----------->GT1  <----------DOF2*TSS<---------At4g35610
------>CBF--------->AHL20(2) ---------->DOF2--------->YAB1--------->ZAT6       --------->ZAT6  -----
 
aattccatgtccataaaattttactttatcaaaaaagaatactattaccataaaagaggtaacacaatctgtgttttaagttccactacttcaggagacc  2417900
                                                            <----------DOF2
                                            <---------ARR11(3)
------->MYB46(3)                  <---------DAG2        <----------DOF2
--->MYB83                         <----------DOF2---------->ID1
--->MYB46(1)           <---------TOE2(3)    <---------ARR14(2)
---->AtMYB61         ---------->DOF2        --------->ARR14(2)        --------->ZAT6   ------>ZmHOX2a(1)
 
aacaatcttccaaactcaaatacaaaaaggtttgagactttttccaagatttgtctcttctttctttattctacctctaaaacaaaaatcctaatcgagt  2418000
                                                                                                  --
                                                                                                  <-
                     <---------YAB1                                                              <--
                    <---------AHL20(2)                                                           ---
                   --------->YAB1                                                                ---
               --------->ICU4                                                                  -----
             --------->YAB1                                                                   <-----
             ---------->DOF2            <---------YAB1                                       <------
            <---------ATHB12         <----------DOF2          <---------YAB1       --------->YAB1---
    <---------AHL20(2)        <----------DOF2               --------->ANAC55(2)  <---------WOX13(1)
   --------->YAB1 <---------YAB1 <---------CCA1(2)     <----------DOF2      <----------DOF2  -------
 
tctctataatattcaataaagattataattcttcttttatcttttgataaaacttgtgctttcatgtgattgtgtttcactttgatttataatctcagat  2418100
         <------NtERF2
       <---------ANAC46
       <---------ANAC58
       <---------ANAC58
      <---------LBD16
  <---------ICU4  <---------YAB1
------------->AGL15
--------------AGL15
---------------AGL2                                           <---------ARR11(3)
-------------->AGL1   <-----------GT1                         --------->ARR11(3)
-------------->AG<----------DOF2                            <---------AHL20(2)
---->GLK1(2)  --------->GLK1(2)                  <---------GLK1(2)
----GLK1(2)   --------->ARR11(3)                <---------At4g35610
---At4g35610  <---------ARR11(3)                --------->At4g35610
-------------->AGL3<---------ICU4           ------->TEIL------>ZmHOX2a(1)
-->At4g35610 <---------GLK1(2)          <---------ARR11(3) <---------ATHB12
 
tccaaaaatggcggaagaatctttattaccatctcatacagaagatgtatcagcttctcctaataaatcttcatcacttctgtctgaaatatcaaatgct  2418200
                                           <---------ANAC46
                                           <---------ANAC58
                                           <---------ANAC58
                                      <---------ANAC58
                                 <---------ANAC58
                                 <---------ANAC58
                             <---------MYB46(3)
       <----------DOF2       <------MYB83------>NtERF2
      <---------DAG2         <------MYB46(1)
    --------->ARR11(3)     <---------MYB52(1)
    <---------ARR11(3)   <-----------RAV1(1)      <----------DOF2                 <---------AHL20(2)
<---------O2       <----------DOF2    <---------ANAC58                  <---------TOE1(2)
--------->O2      <---------ANAC58   <---------AtMYB61            --------->GLK1(1)           ======
--------->ANAC46  <---------ANAC58   <-----------RAV1(1) <-------TEIL  ------>ZmHOX2a(1)      ------
 
tccacgagaccttttgttcttgctttcactgttggttcttgtggtgccttgagctttggatgcattgtgagttcctaagttccatttttttgtaatcctt  2418300
                   <------ZmHOX2a(2)
                 --------->At4g35610                        --------->AHL20(1)
                 <---------At4g35610                     --------->AHL20(2)
           <----------DOF2                               --------->YAB1                    <--------
        <-----------GT1           <------MYB83        ------>MYB83                     <-----------GT1
       <-----------GT1            <------MYB46(1)     ------>MYB46(1)             <------MYB83    <-
      <---------AHL20(2)--------->TOE2(3)           ------->GAMYB                 <------MYB46(1)<--
    <---------YAB1--------->AGP1 --------->MYB59--------->MYB46(3)           <---------TOE2(3)  ----
==========================HOX2a_HOX2a<-------TEIL--------->WOX13(1)    ------->TEIL  --------->CCA1(2)
>ZmHOX2a(1)<---------DAG2        <---------TOE2(3)-------->P<---------AHL20(1)  <--------P ---------
 
caatgttattttaacttttcagatcaacatcaaaattaggttcaattttcatcaaccaaataatatttttcatgtatatataggttggatatacagctcc  2418400
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AGI:  At4g04750.1   
Description:  carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter. Identical to Sugar transporter ERD6-like 14 [Arabidopsis Thaliana] (GB:Q8GXK5;GB:Q9M100;GB:Q9ZS99); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT4G04760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68592.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved site; (InterPro:IPR005829); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); conta
Range:  from: 2417886    to: 2422622    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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