Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ANAC58                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                            --------->ANAC46                   --------->ZAT6           --------->ANAC58                <-----------GT1          --------->ARR14(2)       --------->YAB1           <----------DOF2                                       --------->At5g28300     --------->ANAC58      ------>MYB46(1) <-------TEIL              ------>MYB46(1) ----------->GT1     --------->ANAC58     --------->WOX13(1)--------->ANAC55(1)      ------>MYB83  --------->ZAT2 -->GLK1(2)  <---------ZAT6------>MYB83  <---------ARR14(2)        <---------MYB59 <---------ZAT2----   gatttgcaagcataagtgttaccagtaccaatctctttacacatatacgtaatcccaaattgacctcgacctaattctttccccaagctgtaaaatttcc  2397400                                     <---------HSFB2a(2)                                  --------->ARR14(2)                                  --------->ARR11(3)                                  <---------ARR14(2)                                  <---------ARR11(3)                                  <---------AGP1                                <XXXXXXXXXXXXXXXXXXXXMIR851-5P                            <---------ARR14(2)                            ------->TEIL                                               <---------ANAC58                            <---------ARR11(1)                                        <------MYB83                            --------->ARR14(2)                                        <------MYB46(1)                           <---------CCA1(2)                                          <---------MYB46(3)                           <---------ARR14(1)                                        <---------AtMYB61                  --------------->AGL15                                             <---------WOX13(1)                  <---------------AGL15                                    <---------At4g35610                  <---------MYB59<---------CCA1(2)                         --------->At4g35610                  --------->TOE1(3)  --------->HSFB2a(2)        --------->ALFIN1  --------->ATHB12                  --------->TOE2(3) ------>ZmHOX2a(2)        <---------DEAR3(1) <---------WOX13(1)            ----------------------->TaNAC69(2)      --------->ARR14(2) --------->ARR14(2) -->ZmHOX2a(1)   <-----------------AGL1             <---------ARR14(2)<---------GLK1(1)<---------ANAC58   tgatgtcttcgaatggtttacctaaaatcgtatctggatctcgaactgagactggatttgaagacggtgttgaaatctgctgatggattggttgagtcat  2397500                                                                                     <---------MYB52(1)                                                                                     <------NtERF2                                                                                    ------>NtERF2                                                                                   --------->RAP2.3(3)                                                                                   --------->DEAR3(1)                                                                                   --------->RAP2.3(2)                                                                                   --------->RRTF1(3)                                                                                  --------->RAP2.3(1)                                                                                  --------->ATERF1(1)                                                                                 --------->LBD16                                                                                 <---------ATERF1(1)                                                                           <-----------GT1                  <---------TOE1(3)                                 <---------WOX13(1)                  <---------TOE2(3) ------>NtERF2              <---------LBD16   ------>NtERF2        --------->ALFIN1          --------->LBD16              ------>ZmHOX2a(2)--------->DEAR3(1)      <-----------RAV1(1)       <---------LBD16             --------->ATHB12    --------->ANAC46   <---------AtMYB61           <---------LBD16            <---------WOX13(1)   <---------LBD16     <-   gggttttggtgttggggtttgaggtttacgatgctcggggactacatgggtttgaactggattgatcgggattgatttttctccgccgtcgttttgagtt  2397600                    --------->ANAC58                    --------->ANAC58                 <---------ANAC46           --------->At4g35610                      <---------MYB46(3)              <---------WOX13(1)           <---------At4g35610                  --------->ATHB12                  --------->ATHB12      <---------ZAT14                          <---------MYB52(1)                <---------YAB1  <---------MYB52(1)-------->P---------->DOF2----------------->AGL1          <---------TOE2(3)    --- --------->LBD16--------->ANAC58          <----------DOF2                <----------DOF2          --- --------LBD16  --------->ANAC58     <------ZmHOX2a(1)         ---------->DOF2 <------ZmHOX2a(1)  ---   ttccggtgtttactgctgaagcaacccattagtaaaggaggagactttcgttattgggtagaagaaaaagatgagcttgaaggatgattggaagagagaa  2397700              --------->ATHB51              <---------ICU4              --------->ATHB12              <--------ATHB1             <---------YAB1             --------->ICU4           --------->YAB1               <-----------------AGL1      ------------>CBF -------------->AG                    <---------WRKY18(1)         <---------ANAC46 -------------->AGL1       <---------TOE1(3)             *TSS <-----------HVH21 -------------->AGL2       <---------TOE2(3)             --------->WOX13(1)   accaaaatcggaagaataattgagttgtgaaggttttgtttgactggaattggaattatctatcagtcgcgtcaatttctgagtgtaatagatagaactg  2397800                                                                         <---------AHL20(2)                                                                         <---------AHL20(1)                                                                    --------->AHL20(2)                                                                   --------->AHL20(2)                                                             --------->YAB1                                                        <---------AHL20(2)    --------->AHL20(1)                                                        --------->AHL20(2)    <---------AHL20(1)                                                     <---------AHL20(1)  --------->AHL20(1)                                                     --------->AHL20(1)  --------->AHL20(2)                                                     <---------AHL20(2) <---------AHL20(2)                                                ------------>CBF   <---------AHL20(2)                                               --------->ANAC46<---------YAB1 <---------AHL20(2)                                            --------->ARR14(2)--------->AHL20(1)                                            --------->ARR11(3)<---------AHL20(2)                                            <---------ARR14(2)<---------AHL20(1)                                           --------->RVE1(1) --------->AHL20(2)                                           --------->CCA1(1) <---------AHL20(2)       <XXXXXXXXXXXXXX                   <----------DOF2     <---------AHL20(2)<---------AHL20(2)   --------->AHL20(2)            <----------DOF2            --------->AHL20(1)--------->AHL20(1)  <---------AHL20(2)      <------------CBF        --------->At4g35610    --------->AHL20(2) --------->AHL20(2)   --------->AHL20(2)  ------------>CBF--------->AHL20(2)--------->AHL20(2)  --------->AHL20(2)   ---   tttaagtaaattgtcttttgtctttgtcaatttgctgaaaataaaatatccacaataaattaattatatttaaaataaattaaatttgacttacattttt  2397900                                                                                          --------->YAB1                                                                                         <---------AHL20(2)                                                                                <-----------GT1                                                                               --------->KAN4(2)                                                                              <---------KAN4(1)                                                     <---------ANAC58         --------->KAN4(1)                  --------->AHL20(2)                 <---------ANAC58         <---------HSFB2a(1)                  <---------AHL20(2)       ----------->GT1                    --------->HSFB2a(1)           ----------->GT1                --------->ANAC58                    <----------TaMYB80          <---------TOE2(3)               ----------->GT1                    --------->ARR14(2)          <---------TOE1(3)               --------->ANAC58                   <---------KAN4(2)   ====          <---------YAB1             <---------HSFB2a(2)            <---------------AtSPL8<---------ICU4       <---------AHL20(2)            --------->HSFB2a(2)        ----------->HVH21        <---------YAB1      --------->AHL20(2)             --------->HSFC1(1)     --------->ATHB12<---------GLK1(2)-------- XXXXXXMIR861-5P <---------AHL20(2)  <---------HSFC1(1)    <---------AHL20(2)---------->TaMYB80  ---- ------->DOF2    --------->AHL20(2) <---------LBD16  <---------ANAC46   <-------TEIL   --------->YAB1   caaaggaattttatggtaaaaaaatttcgaatatttgttctggaacggaaaaattccttgttttattggacgggtacagaatattccatttataattaga  2398000                               <---------YAB1                               <---------AHL20(2)                              --------->AHL20(2)                              <---------AHL20(1)                              --------->YAB1                     <<<<<<<<<<<<WRKY18                     <---------TGA1a                                                        ---------                     --------->ANAC55(2)                                                    <--------                     --------->O2<---------AHL20(2)                         <---------AHL20(1)                     <---------ANAC55(2)                                    --------->AHL20(1)                     <---------O2<---------AHL20(1)                         <---------ARR11(3)                 <-----------HVH21<---------YAB1                 --------->YAB1             <--------     <---------AHL20(2)     --------->ICU4                      <---------ICU4     <-----------GT1 ==============================bZIP_DOF            --------->AHL20(2) <----------DOF2    ---------->DOF2 ->YAB1        ================MYC_MYB--------->AHL20(2)       --------->ICU4     <-----------GT1 ------>DOF2   <------------AtMYB77   <---------AHL20(2)  <---------ZAT6    --------->ARR11(3)   aaagtattgaatttcgaactgtcaagtgtcaatattatttttaatttcaaaaaaaaaatagtgtcaatattactttgatatatttttccattacagctga  2398100                                                          <---------AHL20(2)                                    <---------AHL20(2)    --------->AHL20(2)               -------->HAHB4       --------->AHL20(2) --------->AHL20(2)               --------->YAB1   --------->AHL20(2)    --------->AHL20(2)        ----------->GT1         <---------AHL20(2)    <---------AHL20(2)       --------->DAG2       --------->TOE1(3)       --------->YAB1     ---------->DOF2        --------->TOE2(3)     --------->AHL20(2) >At4g35610   <---------YAB1--------->YAB1    --------->AHL20(2)                              <------ -ZAT2 <---------TOE2(3) <-----------GT1      <---------AHL20(2)                             -------- -At4g35610  <---------TOE2(3) --------->AHL20(2) <---------AHL20(2)               <-----------GT1   tataaaaaaaaggttaatgataaaaaataaccataaaattaaacaaaattaaaaaaataattttttgtcagaaaatttagataaataacattttttaaag  2398200                              <---------ANAC58          --------->YAB1                            <---------AHL20(2)       --------->YAB1                            <-----------GT1 <---------ICU4                 --------->ARR11(3)         ---------->DOF2                 <---------ARR11(3)         <--------ATHB1                 --------->AHL20(1)         --------->YAB1     --------->YAB1                --------->RVE1(1)          <---------ATHB12 --------->WOX13(1)   <---------ICU4<---------AHL20(1)        <---------ATHB51<---------AHL20(2)        --------->AHL20(2)  --------->AHL20(2)<----------DOF2        --------->ICU4  --------->AHL20(2) --------->At4g35610 --- ---TOE2(3)     --------->CCA1(1)        --------->YAB1<---------YAB1     <-----------GT1         --- -->DOF2    --------->AHL20(2)<---------ANAC58      <---------ZAT6      <---------WOX13(1)        <--   tagaataaatactaaaaaatatctttctattttcttgtttctacaataatgccagtgataataaatcagagttgattaacatctgaataaaaaacatgaa  2398300  Previous    Next  AGI:  At4g04720.1    Description:  CPK21 (calcium-dependent protein kinase 21); calmodulin-dependent protein kinase/ kinase. similar to CPK15 (calcium-dependent protein kinase 15), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G21940.1); similar to CPK23 (calcium-dependent protein kinase 23), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04740.1); similar to CPK9 (CALMODULIN-DOMAIN PROTEIN KINASE 9), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G20410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17935.1); similar to calcium-dependent protein kinase [Solanum lycopersicu Range:  from: 2394456    to: 2397757    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version