Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------At4g35610                                                         --------->At4g35610                                   --------->YAB1        --------->ZAT2                         -----                     --------->ARR11(3)                  <---------ZAT2                        ------                     <-----------ARR10                  --------->ANAC46                    >>>>>>>>>      --------->AtLEC2      --------->ANAC46           <---------HSFB2a(2)                  <-------- --------->ANAC58    --------->ARR14(2)             --------->GLK1(2)                       >>>>>>>>> --------->ANAC46    <---------ARR14(2)        ---------->DOF2   <----------DOF2            >>>>>>>>> --------->ANAC58    <---------ARR11(3)      <---------MYB59  <---------ARR11(3)           --------->WRKY38(1)   tgaacgacatccaaagaatgacaaatcttcacagcattcacaatagacctaaagattccagcagcatctttctcagagtaatagctatgagacttgacca  2392500                                --------->ANAC46                                --------->ANAC58                                --------->ANAC58                        <---------TOE1(2)                              ----------->RAV1(1)                       <---------TOE2(2)                              <---------ALFIN1                   <---------YAB1                              --------->AtMYB61                 --------->ARR11(3)       ------>ZmHOX2a(2)     --------->ANAC46                   <---------ARR11(3)        <---------TOE1(1)     <---------ARR11(3)    --------->DEAR3(1)                 <---------YAB1              <---------TOE2(1)     --------->ARR11(3)    <---------ALFIN1                 <--------HAHB4               --------->SPL7 ----->DOF2                --------->AtMYB61                --------->ATHB51         ------>ZmHOX2a(2) --->AtMYB61              --------->MYB46(3)                --------->YAB1           ================ >WRKY43                --------->AtMYB61                   <---------ICU4   --------->HSFB2a(1) -WRKY18(1)             <---------ALFIN1                    -------->ATHB1   <---------HSFB2a(1) >WRKY38                --------->ANAC46                   --------->ICU4 <------ZmHOX2a(1) >WRKY26               --------->MYB46(3)                  <---------YAB1 ==================HOX2a_HOX2a   aagcatcgatcttgtcgaataactcaccaccaccacacaattccattacaatgtgtatagaattattatcttcgtaggaacctttgatctgtacgatgtt  2392600                                                                              <---------TOE2(2)                     --------->ATHB12                                         <---------TOE2(3)                 ------>ZmHOX2a(2)              <----------DOF2               <---------TOE1(2)               <---------ARR11(3)           <---------GLK1(2)   <---------ANAC46           --------->YAB1                  <---------ZAT2      --------->At4g35610      ------>ZmHOX2a(1)               <---------REM1(2)     <---------At4g35610       --------->ARR14(2)      ==================HOX2a_HOX2a   <---------ZAT14  <<<<<<<<<TBF1        <---------MYB52(1) ------ ============HOX2a_HOX2a    ------->TEIL   <---------At4g35610 <---------At4g35610    <---------ARR14(2)   aggctgtcctgaaacatgatccatgatttgaatctctgtcttcacagcttctttttcttcttcgctgcttagagttctcttaggtatggatttgcaagcg  2392700                                                  <----------DOF2                                                 --------->TOE2(3)                       --------->ARR11(3)        ------>ZmHOX2a(1)                     <-----------GT1                            <---------ARR11(3)   <----------DOF2              <-----------RAV1(1)                --------->DEAR3(1)   <---------GLK1(1) --->YAB1           <----------DOF2      --------->LBD16      <-----------HVH21         <---------CCA1(2)   taactctttcctgttgaattctctttgcacaagtatgttgttccgaaattacctttgcctagttcgtcaccgaagctatagtgcttcttgatatcttcca  2392800                                                                        --------->WOX13(1)     ------                       <----------DOF2                             <---------At4g35610         <-----               <---------CCA1(2)                                   --------->LBD16             <-----           --------->GLK1(2)                       <---------MYB52(1)----------->RAV1(1)     --------          <---------GLK1(2)   ------>ZmHOX2a(2)   <-----------HVH21--------->At4g35610   <---------MYB46(3) <---------ANAC58     <---------ANAC58        --------->GLK1(2)   --------->ANAC46    --------->TOE2(3) <---------ANAC58     <---------ANAC58 <---------GLK1(1)         <---------LBD16    ------->TEIL<----   atggcttcccaagaatcgtctcttgcttttgatccgagacgatatcagaagctgttaggggtttacttccgcagcaattacccatgaaccttggttagat  2392900                                                                --------->At4g35610                                                                <---------At4g35610                                                                --------->ZAT2 --->ARR11(3)                    <---------GLK1(2)              <---------ZAT2 ----ARR11(3)         ------->TEIL ----------->GT1            <------ZmHOX2a(1)     <---------ARR11(3) ----GLK1(2)     --------->At4g35610   <---------AHL20(2)   <---------TOE2(3)       --------->ARR11(3) --->ARR10  <---------TOE2(3)    <------------CBF     --------->ICU4              ------->TEIL -----RVE1(1) <------ZmHOX2a(1)<---------YAB1      <------ZmHOX2a(1)<---------AtMYB61    <----------DOF2   tttttctagggttttaggaagatgaatcgaaccaagattgttaaaatgtagtaggaatatttaaggagctgtggttttgtgatgaacatctctttggctg  2393000                                                     <---------AHL20(2)                                                     <---------YAB1                                                     --------->AHL20(2)          ----------->GT1                   ------>NtERF2                           xxxxxxxxxxxxxxxxx     ----------->TBP                    <-----------GT1     <---------ZAT6  --------->ICU4     --------->AHL20(2)           ---------->ID1    <---------AHL20(2) --------->ANAC58     <---------AHL20(2)  <XXXXXXXXXXXXXXXXXXXXMIR415--------->AHL20(2) --------->ANAC58  xxxxxxxxxxxx   gagtcatataaatggtgaatgtgttgttttgtttttgttttttttccgcccgattttaattagagttcaaacgaagcaaaaatgagaaatgttgtttaca  2393100                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                                  <------NtERF2                                  >>>>>>>>>E2Fc                                  >>>>>>>>>E2Fd                                 ------>NtERF2                                --------->ANAC58                                --------->ANAC58                                --------->ANAC46               ------------>CBF<---------LBD16                 <----------ID1      <---------AHL20(2)      <---------ANAC58 <---------DAG2  <---------ANAC55(2)     <---------AHL20(2)      ----------->TBP   <---------ARR14(2)     <----------DOF2 <---------YAB1         --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <-----------GT1  <---------AtLEC2         <----------DOF2 xxxxxx>smallRNA(se3)   --------->ARR14(2)   xxxxxxxxxxxxxxxx>smallRNA(i)     <---------AtMYB61 xxxxxxxxxx>smallRNA(si3)     <---------ANAC58xxxxxxxxxxxxxxxx>smallRNA(i) <----------DOF2 <-------TEIL   taagtgatataaatcggttcaatgcgaatatttcgcgccaaattatccgcttttacatttgcattacgaaaaatgttcttttggtcttttaaattcgttt  2393200                      <-----------RAV1(1)                     <---------TOE2(3)             --------->YAB1 <--------P     <---------AHL20(2)   <------MYB46(1)                             <---------ANAC46       <-------     --------->AHL20(2)   <------MYB83              <----------DOF2 <---------ANAC46----------->GT1   <----------DOF2 <---------AHL20(2)       ------>ZmHOX2a(1)    <----------DOF2  ---------->DOF2 <--   ttggtctttaaatattcaaaatttatgttggtaagtttactaagtcctccaagactttattagacgacttttgtgtataaaaccgaaagtataaaatgta  2393300       --------->ZAT2       <---------ZAT2                           <---------ANAC58       <---------At4g35610                      <---------ANAC58       --------->At4g35610                      <---------ANAC46                               <-----  --------->YAB1                      --------->AHL20(1)                                  <---------MYB46(3)  <---------ICU4                      <---------AHL20(1)             --------->AHL20(2) <---------ANAC58 --------->ICU4                       <---------AHL20(2) --------->AHL20(2)            <---------MYB46(3) --REM1(1)                            --------->AHL20(2) <---------AHL20(2)        --------->ATHB12 ----ZmHOX2a(1)                    --------->YAB1      <----------DOF2<---------AHL20(2)<---------ANAC58   ggaattatgagctggaatttgagttgtatacttgtattaataaaatactgacttggtctttaaatattcaaatttatagtattggtcattggttgtttaa  2393400  Previous    Next  AGI:  At4g04710.1    Description:  CPK22 (calcium-dependent protein kinase 22); calmodulin-dependent protein kinase/ kinase. similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to calcium-dependent protein kinase [Solanum lycopersicum] (GB:CAC87494.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase Range:  from: 2389596    to: 2392885    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version