Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <------ZmHOX2a(2)                                    <---------ARR11(3)                                    --------->ARR11(3)                                           ----                              <---------AHL20(1)                                                 ----                              --------->AHL20(1)                                               ------                              <---------AHL20(2)      --------->YAB1                        <--------           <-----------GT1    --------->ARR11(3)   --------->WOX13(1)                ----------->GT1          <---------YAB1   --------->AHL20(2)    <---------YAB1                  <---------AHL20(2)        --------->YAB1    <---------AHL20(2)  <---------YAB1                --------->AHL20(2) ------     <------ZmHOX2a(1)    --------->AHL20(2)  --------->ICU4        <---------AHL20(2)--------->TOE2(3)  <-----------RAV1(2) <---------AHL20(2)    <---------ICU4          --------->AHL20(2)<-----------HVH21 ----->ANAC46         --------->AHL20(2)   --------->ICU4     --------->TOE2(3) --------->AHL20(2)   agcctcaggattataactctgtcattaattaatatatagatcatacttattattaatcaaaacacctaaattaaaaaatcaaataaatcgtcaaatcaac  2118200       --------->ZAT2            --------->ANAC58  --------->ZAT2                 --------->ANAC58  <---------ZAT2              --------->TOE2(3)  --------->At4g35610    --------->ZAT14                       --------->TOE2(3)  <---------At4g35610    <---------ZAT14                  --------->At4g35610  <---------HSFC1(2) ----->TOE1(3)      ------>ZmHOX2a(1)                     <---------At4g35610  --------->HSFC1(2) ----->TOE2(3)  --------->ARR14(2)                   <---------HSFB2a(1) --------->LBD16 -->P  --------->At4g35610   --------->ANAC58        --------->HSFC1(2)<-----------RAV1(2) -ATHB12        <---------ARR14(2)  ---------->DOF2  <---------HSFC1(2)<---------LBD16 ---------->DOF2 ->TEIL<---------At4g35610   --------->ANAC58 --------->ICU4 ------>NtERF2 ----------->HVH21   ctcaagctgagcagacactatcctcactgcaacgtaagtaaagaagtcatgaagatgcttcgctgccttagcctccggtgaagcttctccaaagcctaat  2118300  <---------AHL20(2)                                                <-----------GT1   ------->TEIL  --------->YAB1   --------->TOE2(3)                 --------->GLK1(2)             <---------YAB1   <  --------->AHL20(2)                   <---------------AGL15     --------->YAB1    --------->ICU4----   tcaattatataacaaaaaaaacattagaaaaataggcattaatctatatagaacaattctgtatgaataaaaaccacattttgtgatgaatatgtcatat  2118400                  --------->ARR11(3)        --------->ANAC46        --------->LBD16       <---------ANAC46       <---------LBD16                                                                           <---      <---------LBD16                                                                      <---------     --------->MYB52(1)                            <---------ARR14(2)                   --------->ARR11(3)  --------->ANAC55(2)                              --------->ARR14(2)                   <---------ARR11(3)  <---------ANAC55(2)                            <----------DOF2  <----------DOF2   ---------->DOF2 -----------GT1 <-------TEIL        <---------ANAC58   --------->HSFB2a(2)   --------->ANAC58    ---- ------->GT1<---------KAN4(2)       <---------ANAC58   <---------HSFB2a(2)   --------->ANAC58   -----   tgttacataccgggaacatacatcttgttagaacaaatgcgagtttgtttgcattttcgcgaactctgcattaatggataagaaaccaaaggtctttttc  2118500           <---------TOE2(3) ------------AGL15                             --------->At4g35610                             <----- -DOF2     <---------TOE1(3)             <---------ZAT14                              <------ZmHOX2a(1) ----------->AGL15                   <------ZmHOX2a(1)                             <-----------RAV1(2) ------------>AG                <---------REM1(1)                        ----------->GT1       *TSS   caaattttggattaaggtaagagaggtaagagtgatgaaggagtgaagaagatgactccatagaaatattggatgaagaaaaattgcaggagaggcatat  2118600                                                              ----------->GT1                                                           --------->CCA1(2)                                                          <---------ARR14(2)                                                          --------->ARR11(3)                                                          --------->ARR14(2)                                                         <------ZmHOX2a(1)--------->ARR14(2)                                                   <---------ARR11(3)     <---------ARR11(3)          <------MYB83                             --------->ARR11(3)     --------->ARR11(3)          <------MYB46(1)                         --------->RVE1(1)      --------->CCA1(1)         --------->MYB59                      --------->AHL20(2)         --------->RVE1(1)  <-----------GT1                             <---------AHL20(2)     --------->AHL20(2) -------CBF                          <-------TEIL --------->CCA1(1)  <---------AHL20(2)   tgttttactatttggtcgtatataagagaatgtattagattcacacattaaaatatctaggatatggataaataaatatcttctagttggaagtatatag  2118700                                --------->YAB1                                ----------->GT1        ----------->GT1<-----------GT1                       <---------ARR11(3)              <---------ANAC46     --------->YAB1                       <---------ARR14(2)    <---------ARR11(3)    <---------AHL20(2)                       --------->ARR11(3)    --------->ARR11(3)  <---------YAB1                       --------->ARR14(2)    <---------AHL20(1)<---------AHL20(2)             -------                    <---------------AGL15    --------->AHL20(1)--------->AHL20(2)             <------                    --------------->AGL15   --------->AHL20(2)<---------AHL20(2)--------->ANAC55(2)   acaaaacatgtcttatttgtttcaatatctggtattgtaatatcaaatatatcaattgggtttatttatttttatcaattttaagtatttttctaataaa  2118800                 <---------ICU4                <---------YAB1                <---------AHL20(2)                --------->AHL20(2)               --------->AHL20(2)               <---------AHL20(1)                             --------->AHL20(1)          --------->AHL20(2)                                  --------->AHL20(2)        <xxxxxxxxxxxx      --------->YAB1         ---------->ID1                   <---------AHL20(2)        --------->ATHB12  <---------AHL20(2)     <----------DOF2               --------->At5g28300              --------->ATHB51  --------->AHL20(2)<-----------GT1                   ----------->GT1        ------->TEIL     ------- -->AHL20(2)   --------->AHL20(1)      --------------->AtSPL8 <---------AHL20(1)       <---------YAB1 ---AHL20(2)--------->AHL20(2)   <----------DOF2 <---------AHL20(2)<-----------GT1     --------->ICU4   acaatttatcaaaaaaatataattactctttgtttcttttgtcagtactagttaatcggtaaaatttattaactaaatgtatgtatggcataattgaaaa  2118900                                                                 <---------YAB1               <------                                                           <---------AHL20(2)                --------                                                     ----------->GT1                         <-------                                                     --------->YAB1           <---------------AtSPL8                                                  <---------AtLEC2    <---------ZAT2     <---------YAB1                                              --------------->AGL15   --------->ZAT2  xxxxxxxxxxxxxxx xxxxxxxxxxxsmallRNA(le3)--------->YAB1       <----------DOF2 --------->ICU4  <---------------AtSPL3 --->DOF2               ----------->GT1       <---------------AGL15---------->DOF2  xxxxxxxxxxxxxxxxx   gagttgtgttcaaatggttgtatacaatgaaaaaattcgaaactctagctttgaatggtaattcattatcaaagctggaagttgtacagttttgatggtt  2119000                                                                                  <---------At5g28300                                                                         <---------At4g35610                                                                   --------->TOE2(1)                                                  <---------YAB1   --------->TOE1(1)                                                  <---------AHL20(2)  --------->SPL7                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                           <-----------GT1        --------->HSFB2a(2)                                      <---------AHL20(2)          <---------HSFB2a(2)  <----------DOF2 -GAMYB                            --------->AHL20(2)             <---------------AtSPL3      ------- --->GT1          --------->YAB1   <---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <------ --MYB46(3) <----------DOF2       --------->AHL20(2) --------------->AtSPL8      <-----------GT1 xxxxx>smallRNA(se3)              <---------AHL20(2) <---------------AtSPL8     <xxxxxxxxxxxxxxxxxxxx xxxxxx>smallRNA(se3)   ----------->GT1<---------AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   atacatttacaaaacttttatcaaaaacgttacaaatttttttattttcagttttattgtacagttttctcgtacagctatttttacagctttgcattat  2119100  Previous    Next  AGI:  At4g04330.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO69665.1) Range:  from: 2116551    to: 2118595    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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