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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------
---------
---------
<--------
<--------
<---------
HSFC1(2)
--------->
HSFC1(2)
<---------
At4g35610
<---------
HSFB2a(1)
<---------
ZAT14
-----------
--------->
WRKY45
--------->
GLK1(2)
----------->
HVH21
--------->
ARR14(2)
--------->
GLK1(2)
<---------
ETT(2)
<---------
GLK1(2)
--------->
ARR14(2)
<---------
At4g35610
----------->
ARR10
<---------
ARR14(2)
<---------
MYB46(3)
<------
ZmHOX2a(1)
--------->
HSFB2a(1)
--------->
At4g35610
--------->
WRKY38(1)
---------->
DOF2
--------->
ETT(1)
--------->
CCA1(2)
--------->
WRKY12
--------->
At4g35610
<-----------
HVH21
<---------
ARR11(3)
<----------
DOF2
<---------
At4g35610
<-----------
RAV1(1)
--------->
ARR11(3)
--------->
LBD16
<-------
GAMYB
<-----------
RAV1(2)
<---------
ARR14(2)
agagatatgagcttaagaatccagggctttgactg
ctgttgacaaaacaatttagtcaaaactcagatgaaacaaaggacagattctgtcggaagattct
1433300
--------->
CCA1(2)
--------->
TGA2(2)
<-----------
TGA1
<-----------
HVH21
--------->
ANAC58
--------->
TGA1a
--------->
bZIP60(2)
--------->
ANAC58
--------->
O2
<---------
ARR14(2)
--------->
ANAC46
--------->
ARR11(3)
--------->
ANAC55(2)
--------->
LBD16
<-------
TEIL
<---------
ATERF1(2)
--------->
ARR14(1)
--------->
ATERF1(2)
--------->
CCA1(2)
<---------
LBD16
------->
TEIL
--------->
ARR11(1)
<---------
At5g28300
--------->
ANAC58
<---------
ARR14(2)
<-----------
GT1
--------->
ANAC58
<---------
ARR11(3)
--------->
HSFB2a(1)
->
GLK1(2)
--------->
ARR14(2)
--------->
ARR14(2)
<---------
HSFB2a(1)
>
ARR11(3)
<-----------
ARR10
--------->
GLK1(2)
--------->
ANAC58
--------->
HSFC1(2)
>
ARR14(2)
<---------
ARR11(1)
----------->
ARR10
<------
NtERF2
-
ARR14(2)
<---------
ARR11(3)
<---------
ARR11(3)
<---------
ANAC55(2)
<---------
HSFC1(2)
-
GLK1(2)
<---------
CCA1(2)
--------->
ARR14(2)
--------->
ANAC58
<---------
DEAR3(1)
<----
>
ARR10
--------->
GLK1(1)
<---------
ARR14(2)
<---------
At5g28300
<---------
MYB46(3)
--------->
TOE1(2)
gtttttac
cggcatatcttcgctagacaagaacctgtctagataattcacagcaagatacgtcagagatgggtcgtcgaattttcttgaata
ctgcgatt
1433400
<---------
ARR11(3)
----------->
GT1
<---------
AHL20(2)
<---------
TOE2(3)
--------->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<-----
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------
----------->
GT1
--------->
DAG2
<---------
DOF5.7(2)
--------->
AHL20(2)
<---------
WOX13(1)
-----
MYB46(3)
---------->
DOF2
--------->
DOF5.7(2)
--------->
LBD16
---------->
DOF2
gttcagttacaaattaaaataaagttaagtctttcgataacgattcagtattcagaactaaacccagaaaataattttggttaaaaagac
ctgagtgatt
1433500
<------
MYB83
<---------
ANAC46
<------
ZmHOX2a(1)
<-------
MYC3
<---------
ANAC58
<---------
ZAT18
------->
MYC3
<---------
ANAC58
--------->
At4g35610
<-------
MYC2
----
WOX13(1)
--------->
DAG2
------->
MYC2
->
ATHB12
<------
MYB46(1)
---------->
DOF2
--------->
YAB1
--------->
ALFIN1
<------
ZmHOX2a(1)
gaagaaatggcttggtttcgattagagagaagaaaagcagaggacttgaggctatggaagtaatgagaagaaggcatgtgttgaaactcgacgaggaaga
1433600
--------------------->
WRI1
--------->
YAB1
--------->
ARR11(3)
<-------
TEIL
<-------
GAMYB
--------->
DAG2
<---------
MYB46(3)
<--
---------->
DOF2
<------
NtERF2
<---------
ZAT14
<-----
----------->
GT1
--------->
bZIP60(1)
<---------
ANAC58
<------
<---------
ZAT14
<---------
bZIP60(1)
<---------
ANAC46
<---------
WOX13(1)
--------->
ZAT18
<---------
ANAC46
<---------
ANAC58
------->
TEIL
--------
--------->
ALFIN1
<-----------
RAV1(1)
<---------
ZAT14
<------
ZmHOX2a(1)
--------->
ATHB12
gagagtgtggtaaagtttcatagtctgtgtcgtcgttgaagttattgtggagtgaagaatgtgagagaggatgttcaagatgaaactccat
tgattgatg
1433700
<------------
CBF
<---------------
AGL15
<---------
ANAC58
<---------
ANAC58
-------
WOX13(1)
<-----------------
AGL2
<----
----
YAB1
<----------
DOF2
-------
---
TOE2(3)
--------->
At4g35610
<------
->
YAB1
<---------
At4g35610
<---------
ZAT6
>>>>>>>>>
TBF1
---------->
DOF2
<-------
atagactcttcttaagcttccttctttcttgaattggtgttagaagatgaagaagaagagagagggacagagagacattaaaagagagaagttgtcttta
1433800
<----------
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
<---------
ALFIN1
--------->
ARR11(3)
<-----------
GT1
----
--------
CBF
<---------
GLK1(2)
<-----------
GT1
<---------
AHL20(2)
<-----
-->
ICU4
<---------
ARR11(3)
<---------
YAB1
--------->
AHL20(2)
<------
---
YAB1
<---------
RVE1(1)
<---------
ICU4
<---------
AHL20(2)
<--------
---
DOF2
<----------
DOF2
<---------
AHL20(2)
----------->
GT1
<-----------
GT1
ttgtgagatagagagagatggttttcggtcttttgagagattttccacatttatttattactaccactttggttatttttttattcgattttttctcatt
1433900
--------->
ARR11(3)
--------->
YAB1
---------->
DOF2
<---------
AHL20(2)
--------->
GLK1(2)
--------->
ICU4
<---------
YAB1
<----------
DOF2
----->
YAB1
--------->
ARR11(3)
--------->
ARR11(3)
------------>
CBF
----
WOX13(1)
<---------
ARR11(3)
<---------
ARR11(1)
------------>
CBF
--------->
AHL20(2)
<--
------
CBF
<---------
YAB1
<---------
ARR11(3)
<---------
GLK1(2)
<----------
ID1
<---------
GLK1(2)
-
YAB1
<---------
TOE2(3)
<---------
CCA1(2)
<----------
DOF2
----------->
GT1
--------->
ARR14(2)
gatagtaagaattaagattttatcaaagataatcaaatctttttcaagagattcttcttttgcaatattagaaggaaaaaaaatccaatattctctctta
1434000
<--------
ATHB1
<---------
ICU4
--------->
ATHB51
<---------
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
<-----------
GT1
<---------
ZAT14
<---------
AHL20(2)
<----------
DOF2
<---------
ANAC46
--------->
AHL20(2)
<-----------
GT1
<-------
<---------
ANAC55(1)
<---------
AHL20(2)
<-----------
RAV1(1)
---------
--------->
AHL20(2)
<---------
ATHB12
--------->
AHL20(2)
<---------
ATHB12
------>
ZmHOX2a(1)
--------->
ZAT14
<---------
AHL20(2)
<---------
TOE2(3)
--------->
ICU4
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
DAG2
--------->
TOE2(3)
-------
GLK1(2)
<---------
AHL20(2)
<---------
ATHB51
<---------
AHL20(2)
--------->
AtLEC2
--
aattctctataatcctctgtttttaattaagtgtagttcaataattttttatttttttcaatataaatgttgttttcacttttctatgcaaacattaaat
1434100
<------
MYB83
<------
MYB46(1)
<--------
P
<---------
ANAC46
<---------
AHL20(1)
<---------
MYB46(3)
--------->
AHL20(1)
--------->
ATHB12
<---------
AHL20(2)
--------->
ATHB12
--------->
ICU4
<-----
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
-------
--------->
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
MYB52(2)
<------
--
AHL20(2)
<---------
ATHB12
<---------
AHL20(2)
<---------
YAB1
>>>>>>>>>
GATA-1
>
AHL20(2)
--------->
WOX13(1)
--------->
AHL20(2)
----------->
GT1
<---------
YAB1
--------->
AHL20(2)
----->
TEIL
<-----------
GT1
--------->
YAB1
--------->
MYB55(2)
<---------
AHL20(2)
----------->
GT1
gtatttaatagtttttaaccaattatattttgcatcatatttttttattggttggattagttgtaattaatggtgtttttataagaaatagataaattaa
1434200
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AGI:
At4g03270.1
Description:
CYCD6;1 (CYCLIN D6;1); cyclin-dependent protein kinase. Identical to Putative cyclin-D6-1 (CYCD6-1) [Arabidopsis Thaliana] (GB:Q9ZR04); similar to CYCD4,1 (CYCLIN D4,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G65420.1); similar to D6-type cyclin [Populus trichocarpa] (GB:CAN88868.1); contains InterPro domain Cyclin D (InterPro:IPR015451); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Cyclin,
Range:
from: 1432375
to: 1433691
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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