Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->MYB52(1)         <---------At4g35610              --------->ATERF1(1)      --------->At4g35610                 --------->MYB46(3)  ------>MYB46(1)             <-----------------AGL2  --------->ARR14(2)          <-----------------AGL3                                               >>  ------>MYB83     <---------At4g35610    --------->DEAR3(2)                                   <-----  <---------ARR14(2)          ----------------->AGL3<---------YAB1                        <---------YAB1   cacctatctgcagcaaattgcagcatatcaaatccaaaattggagccaacggttctaattcaaacccaaaattggactactcatacaaaactatgagtga  1385100                          <------ZmHOX2a(1)                    ------->GAMYB                    =========================MYC_MYB                 --------->MYB52(1) >>>>>>>>>>>>>>>>>LFY               <---------------AGL15                ----------->HVH21  --------->ANAC46               ---------->DOF2               ------>ZmHOX2a(2)   --------->bZIP60(1)         <---------At4g35610               ==================HOX2a_HOX2a                   --------->LBD16               <---------MYB59     --------->ANAC58        --------->ARR14(2)              ===================HOX2a_HOX2a               --------->GLK1(2)              <------ZmHOX2a(2)    --------->bZIP60(2)     <---------ARR14(2)             <---------ARR14(2)    --------->ANAC58       <---------ARR14(2)             --------->ARR14(2)    <---------bZIP60(1)   --------->HSFB2a(1)             --------->ARR11(3)    --------->O2          --------->HSFC1(2)             <---------ARR11(3)    <---------TGA1a       <---------HSFB2a(1)             <---------AGP1        ==========================================bZIP_DOF   <----------DOF2         <-----------RAV1(2)       <---------O2          <----------TaMYB80         <---------ALFIN1 >>>>>>>TBF1 <-----------ARR10     --------->TGA1a   <---------ANAC46 ----------------->AGL2      <-- ----ZAT14  <------ZmHOX2a(1)  <-----------HVH21  ----------->HVH21   ----------------->AGL1  -------   agaagaaggcatcaggatctaaccgagaggatgagtcacgccagtggccaatgcgacggagattccgctaatgccaaaatgagacaccacctttgaaaac  1385200         --------->GLK1(2)                                   ----------->RAV1(1)        <---------ARR14(2)                                  --------->ANAC46        <---------GLK1(2)                                   ----------->HVH21-------->ATHB1        --------->ARR14(2)                                 --------->LBD16  <---------ATHB51     --------->YAB1   ------>ZmHOX2a(1)                   --------->ANAC55(2)--------->ATHB51  <---------ARR14(2) --------->TOE2(3)                    <---------ANAC55(2)--------->ATHB12 <------NtERF2   <---------ANAC58                        <---------LBD16    --------->ICU4 -------LBD16    <---------ANAC58                      --------->ARR14(2)   --------->AHL20(2) -->MYB52(1)<-----------RAV1(1)            --------->MYB46(3)------>NtERF2  <---------AHL20(2) ------   ggcggaatcagattctgtggcttcctcaattcttcattcccttcaacaactacacaaattccgcgacatttcagccaaattattgaaatataaacaaaaa  1385300                                                                                    <-------TEIL                                                                                   --------->ARR14(1)                                                                                   --------->CCA1(2)                  <----------DOF2                                                 <---------ARR14(2)                  <---------DAG2                                                  --------->ARR14(2)       <---------AHL20(2)                                                         <---------GLK1(2)      --------->AHL20(2)      ----------->GT1                               --------->YAB1      <---------AHL20(1) --------------->AGL15                             <---------ATHB12 ------>ZmHOX2a(2)      --------->AHL20(1) <---------------AGL15                       --------->ANAC58     --------->ARR11(3)     --------->YAB1   <-----------GT1                                --------->ANAC58     <---------ARR11(3) ---->DOF2  <---------HSFB2a(2)            <---------ALFIN1        ---------->DOF2--------->ARR11(1)   tgcagaaatataatctcgaactttatactaaatggagaaaactcaacaccttcatgttttagtttatgcgaaagcaaatcaaaagattcgatgatcttgg  1385400                                                                      <---------ARR11(3)                                                                     --------->RVE1(1)                                                                     <---------RVE1(1)                                          --------->TOE2(2)          <---------GLK1(1)                                          <---------LBD16            --------->GLK1(1)                                         --------->ZAT2             <---------ARR11(3)                                         ----------->RAV1(2)        --------->ARR11(3)                                         <---------ZAT2        <------NtERF2                                        --------->GLK1(2)     <---------MYB46(3)                                        ------->TEIL          ------>NtERF2                                  --------->TOE1(2)           --------->LBD16                                  ----------->HVH21          <---------DEAR3(1)                                 --------->DEAR3(2)          --------->ALFIN1                                 ------>ZmHOX2a(2)           <---------ANAC46                                --------->ARR14(1)        --------->DEAR3(1)                               <---------ARR11(3)         <---------DEAR3(1)                               <---------ARR14(2)         <---------ATERF1(2)                               --------->ARR11(1)        --------->At4g35610                               --------->ARR14(2)        --------->ATERF1(1)                               --------->ARR11(3)        <---------At4g35610                              --------->RVE1(1)          --------->DEAR3(2)                             ----------->ARR10           <---------LBD16                      ----------->GT1<---------MYB52(2) --------->MYB52(1)                        <--              --------->ARR14(2)--------->CCA1(2)     ----------->HVH21       <---------ATHB12<------              <---------ARR14(2)<------ZmHOX2a(2)    <-----------HVH21--------->ARR11(3)  <----------        <---------TOE2(3)  ---------->DOF2--------->TOE1(2) <---------LBD16   <------ZmHOX2a(2)<-----   gattgaaattgaggcatatacagagagcaaaaagatccgacgaacctgggattgaagtcaccggcggggagatatctccgatcattttgttttttccgtt  1385500                                         <---------O2                                         --------->TGA1a                                         --------->O2                                         <---------TGA1a                                         <---------DEAR3(1)                                         =================bZIP_DOF                                         <---------bZIP60(2)                                         --------->bZIP60(1)                                         --------->bZIP60(2)                                     <---                                         <---------bZIP60(1)                                     ----                                     --------->DEAR3(2)                                          ----                                 ----------->HVH21                                        <---------YAB1    <---------ANAC58           <---------ANAC46                                         --------->YAB1    <---------ANAC58           ----------->GT1                                         <---------YAB1 ==================================================bZIP_DOF                         <---------ARR11(3) <----------DOF2             <---------ANAC46                                       --------->ARR11(3) -------YAB1                 <---------ANAC58                                   <---------MYB52(1) -GAMYB                      <---------ANAC58                                  <-----------HVH21 ---- -GT1                      <-----------HVH21    <-----------HVH21              <---------RAP2.6(3) ----MYB52(1)             --------->ANAC46     <----------DOF2       <------------CBF<---------GLK1(1)   attctttcttgggaaatggtctgtttatacgtcgtgtgaaacgacgtcgctttcagagataattctccagttattgatagccgttagatatcataaatga  1385600          <---------At4g35610          <-------GAMYB                                                                          ----      <-----------HVH21      <---------YAB1                                                      <---    --------->DEAR3(2) <----------DOF2       ---------->DOF2                                  ------- ------ARR14(2)  <---------YAB1 <---------YAB1--------->DAG2                 <<<<<<<<<TBF1--------->MYB52(1) ----->ARR14(2)<---------bZIP60(1) <---------TOE2(3)        *TSS        <----------DOF2<---------DEAR3(2) --->TEIL<---------MYB46(3)  <---------AHL20(2)----------->GT1   <----------DOF2    <-----------HVH21 ----->GLK1(2) --------->bZIP60(1)---------->DOF2--------->AHL20(2) <---------ZAT18--------->ANAC46   atctggaccgtcggatgatatcattcttttttttattaaagtaggcgaaaagtaaattcgactccctctttgcactttcttcttcccgtcgctaccgaaa  1385700                                                                     ------>ZmHOX2a(1)                                                                    --------->TOE2(3)                                 <----------DOF2                   ------>ZmHOX2a(2)                                --------->HSFC1(2)                <------ZmHOX2a(2)                                <---------HSFC1(2)               <---------GLK1(2)                                <---------HSFB2a(1)              <---------ARR11(3)                                --------->HSFB2a(1)              --------->ARR14(3)                           --------->HSFB2a(2)                   --------->ARR11(3) ----->HSFC1(2)            <---------HSFB2a(2)                   --------->ARR14(2) ------HSFC1(2)           <---------LBD16       ------>NtERF2    <---------ARR14(3)     <-------TEIL --->DOF2         <---------TOE1(2)          ------>NtERF2       <---------ARR14(2) <---------ZAT6  -   gcttctgtctctctcactcgcagggttctctggaactttctgaacgatgccgaggtatagggtttaagatcctcagagttatactactgatacatagata  1385800                             <---------ANAC55(2)                             <---------ANAC58                <------MYB46(1)                                                                  <---                <------MYB83 <---------ANAC58                                                   -----               <---------TOE2(3)                                                               ------         --------->HSFB2a(2) <---------ANAC46                     <---------ICU4               <----- --------->ANAC55(2)         <---------ANAC55(1)                  --------->ATHB12             <----- <---------ANAC55(1)         --------->ANAC55(2)                 --------->ICU4             <-------- <---------ANAC58          <-----------GT1                       <---------YAB1             --------- <---------ANAC46          <---------AHL20(2)                 <---------YAB1                --------- <---------ANAC55(2)   <---------AHL20(2)          <---------TOE1(2)        <---------ANAC55(2)<----- <---------ANAC58      --------->AHL20(2)          <---------TOE2(2)        --------->ANAC55(2)<----- -------->MYB59--------->MYB59           <---------YAB1   <---------At5g28300            <---------YAB1   gttacgtagttcgagattaggttttttaattacttgtttgattttgattttcgcaggtattactgtgattattgcgatacttatctcactcacgattccg  1385900      ------>ZmHOX2a(1)  <-----------GT1 ------MYB52(1) ---->LBD16 --->ANAC55(2) ----ANAC58                                                                                  -------- ----ANAC46                                                                          <------MYB46(1) -ARR14(2)                                                               <---------AtMYB61   <------- >ARR14(2)                                          --------->ANAC55(2)--------->LBD16 <---------GLK1(1) >GLK1(2)------>ZmHOX2a(1)              --------->ZAT14            ------>ZmHOX2a(2) <------MYB83 ----ANAC58<----------DOF2              <---------ZAT18           <---------GLK1(1) --------->MYB59<- ----ANAC55(2)   <---------AHL20(2)  --------->YAB1<---------TOE2(3) <---------LBD16<---------TOE2(3)   taagtttcctcctctttgttttattgtcttccctagtaatcgtgaactcgttttaggtgatgaattcgatctccggaggtgtctattaggtttccgattt  1386000  Previous    Next  AGI:  At4g03115.1    Description:  mitochondrial substrate carrier family protein. similar to ATPUMP1, binding / oxidative phosphorylation uncoupler [Arabidopsis thaliana] (TAIR:AT3G54110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22426.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 1383366    to: 1385485    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g03120.1    Description:  proline-rich family protein. similar to Os02g0266100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046503.1); similar to hypothetical protein OsI_006526 [Oryza sativa (indica cultivar-group)] (GB:EAY85293.1); contains InterPro domain Zinc finger, C2H2-type matrin; (InterPro:IPR000690); contains InterPro domain Zinc finger, U1-type; (InterPro:IPR003604); contains InterPro domain Zinc finger, U1-C type; (InterPro:IPR013085) Range:  from: 1385660    to: 1387739    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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