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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                        <--------ATHB1
                                                        -------->HAHB4
                                                        <---------ICU4
                                                       <---------ATHB12
                                                       --------->ICU4
                                                       <---------YAB1
--->CCA1(2)                --------->MYB52(1)    ----------->GT1--------->YAB1  --------------------
-->GT1           ----------->GT1                 <---------MYB46(3)  <----------DOF2 ---------------
------>ANAC81  ---------->DOF2       --------->GLK1(2)<---------TOE2(3)     ---------->DOF2     ----
 
aacaaatcgaatttttgggaaagaaaaaaaaaacagagagaattttggagagtggttaatgattctataatgctttgaagaaagagaaaacaaaaaaaaa  1244400
                                         <-------GAMYB
                                        --------->ALFIN1
                                      <---------ANAC58
                                      <---------ANAC58
                                     <---------MYB46(3)
                                     <---------DEAR3(1)
                                    --------->ALFIN1
                                   ------->MYC3
                                   <-------MYC3
                                  ===============MYC_MYB
                                  --------->TGA1a
                                  <---------ANAC46
                                  <---------O2
                                  --------->O2
                         <---------CCA1(1)
                         <---------RVE1(1)
                        --------->ARR11(3)
          <---------At4g35610     <---------ANAC58
   ---------->DOF2      <---------ARR11(3)
   =========================================bZIP_DOF
---->ANAC81    <---------YAB1     <---------ANAC58
--------->ANAC81  <---------YAB1  <---------TGA1a
----->AHL20(2) --------->ICU4   --------->ANAC46                                               -----
 
aaaatcgaaaggaagatgatgatgagagatatttcacgcgtgggtgttgagagaacataaaaacagagtcatcactctaatttttgttttgttctctagg  1244500
                                           --------->ATHB12
                                           <---------ICU4
                                          <---------YAB1
                                          --------->ICU4
             ------>MYB46(1)            --------->YAB1
             ------>MYB83              <------ZmHOX2a(2)
           <---------MYB59            --------->ARR11(3)
     ---------->DOF2             --------->MYB52(1)              <---------YAB1
------------------------>ANAC81 <---------ATHB51            <---------GLK1(2)              ---------
------>GT1 --------->AtMYB61    <---------ATHB12    --------->ANAC46                      ----------
 
gaaaatcaaaaagaccaaacaaaaatttcagtcaaataatggatcatgattaaacccacaagagaatttcgattacaaaactcattagataaaaaaagtt  1244600
                                                                --------->O2
                                                                <-----------------AGL1   --------->ARR14(3)
                                                                <---------O2--------->ANAC58
                                                                ==========================bZIP_DOF
                                                                <---------TGA1a          --------->ARR14(2)
                                                                --------->TGA1a          <---------ARR14(3)
                                                                ----------->RAV1(2)      --------->ARR11(3)
                                           ===============================bZIP_DOF       <---------ARR11(3)
                                       --------->ANAC58         <---------At4g35610      <---------ARR14(2)
    --------->AHL20(2)                 --------->ANAC58         --------->At4g35610    ----------->ARR10
  <----------DOF2       ------>ZmHOX2a(2)  ---------->DOF2      --------->ZAT2 ---------->DOF2
>DAG2           --------->ALFIN1  ----------->HVH21             <---------ZAT2<------ZmHOX2a(1)
>DOF2   <---------AHL20(2) <---------TOE1(2)           <------ZmHOX2a(1)    --------->ANAC58
 
tgagactttatataaacaagtgtgtgatcgtatgtctctgacaagacaaagagagagaggatgactcacctgagatggtaaggaaagaagaagatattgt  1244700
                                                                 <----------DOF2
                --------->DAG2               <---------YAB1<---------O2            <-----------GT1
       <---------AGP1             <---------ANAC46  <---------ZAT14   ---------->DOF2
 
tgttttagtagaactgagaaaggttgtacttggaatggagtttagaacatgatactgaagagacatggctttaaaaagctctgttttctctgtctaagta  1244800
                                                                                 ------>MYB46(1)
                                                                                 ------>MYB83
                                                                            --------->ARR14(2)
                                                                            <---------ARR14(2)
                          <------MYB46(1)                              <------ZmHOX2a(1)
               <---------YAB1                                         <----------ID1           <----
            --------->ICU4<------MYB83                           <---------AHL20(2)    --------->ANAC46
            *TSS  ------->TEIL                                   --------->YAB1--------->DEAR3(1)
          --------->CCA1(2)     ---------->DOF2                <-----------TBP--------->DEAR3(2)
 
tttagtgaagaagagatgatgaaactatttggtgagaaagagagagagagagaagtcttaatgggtatttataaggacagaaccgacttcacatcagaga  1244900
                                                                                      --------->ANAC55(2)
                                                                                      --------->ANAC58
                                                                                      --------->ANAC46
                                                                                      <---------ANAC55(2)
                                                                                      --------->ANAC58
                                                                               ---------->DOF2
                                                                          ------>ZmHOX2a(2)
                                                                         <---------HSFB2a(1)
                                                                         --------->HSFB2a(1)
                                                                         <---------HSFC1(2)
                                                                         <------ZmHOX2a(2)
                                                                         --------->HSFC1(2)
                                                   <---------AtLEC2     <---------ARR11(3)
                                            --------->CCA1(2)           --------->ARR14(2)
                    ---------->DOF2        --------->ARR14(2)           --------->ARR11(3)        --
         <-----------GT1                   <---------ARR14(2)           <---------ARR14(2)       ---
--------CBF   <----------DOF2             <------ZmHOX2a(1)       <-----------RAV1(1)<---------LBD16
 
ttgtgtttcattttactctttgagaaagaagagagagagagagaaggatatgatgcatggaatgtgtttttgtgggatcttccaaagctacggaattgaa  1245000
                                                                           --------->MYB52(1)
                                                                           <---------ICU4
                                                                          <---------AHL20(2)
         <---------DAG2                                                   <---------ATHB51
         <----------DOF2                                                 --------->AHL20(1)
        <---------ANAC58                        <-----------GT1         --------->YAB1      --------
        <---------ANAC58                --------->ARR11(3)            --------->AHL20(2)    <-------
       ---------->ID1                   <---------ARR11(3)            <---------AHL20(2)   <--------
------->At5g28300        ------>ZmHOX2a(1)   <----------DOF2         --------->YAB1        <--------
-------->GT1          <-----------GT1  <---------CCA1(2)    <---------AHL20(2)      --------->DAG2 -
 
gggtaaatttggctttttcttctatttcctattctcttgtttatatctcttttacaacttgatttttttttataaaaataatggcataaggtcgatatct  1245100
                                                                 <---------TOE1(3)
                                                           --------->ICU4
    --------->ZAT14                                      <--------ATHB1
    <-------TEIL                                         --------->YAB1
    <---------ZAT14                                      <---------AHL20(1)
    --------->ZAT18                                      <---------ICU4
    <---------ZAT18                                      --------->ATHB51
--------------->AtSPL8                                   --------->AHL20(2)      --------->ICU4
<---------------AtSPL8                      <---------CCA1(2)    <---------TOE2(3) --------->MYB59
->ARR11(3)                                --------->YAB1<---------ATHB51      <---------YAB1
--ARR11(3)                             <---------CCA1(2)--------->ICU4       --------->ARR11(3)    <
-CCA1(2)                             --------->YAB1--------->ANAC58          <---------ARR11(3)    <
-GLK1(1)            --------->TOE1(2)<---------ICU4--------->ANAC58  ----------->GT1 <------ZmHOX2a(1)
--------->DOF2  <-------TEIL        <---------ATHB12    <---------ATHB12 ---------->DOF2           <
 
ttgaaagtacacacacacatacacatacgagggcttctaatcatatcatatcacaaacaataatttttaaggtcgtaaaagataattaggaaacaatatt  1245200
                                          <---------AHL20(2)
                                         <---------AHL20(2)
                                         --------->AHL20(2)
                                        <---------YAB1
                                      --------->YAB1
                                     <---------YAB1                         <------MYB46(1)
        --------->bZIP60(2)        --------->YAB1                           ----------->GT1
        --------->ANAC58           -------->ATHB1                           <------MYB83
        --------->ANAC58           <--------HAHB4                          <---------------AtSPL8
   ----------->HVH21               --------->ATHB51   ----------->GT1      <---------------AtSPL3
---------ANAC46                    <---------ICU4     <---------ANAC46     --------------->AtSPL8---
---------ANAC58                   <---------YAB1 <---------ANAC58        <------ZmHOX2a(1)<---------
---------ANAC58     <---------YAB1--------->ICU4 <---------ANAC58    ---------->DOF2     <---------ZAT6
 
tgtcgtgtgacaagtcatatatgactattgcaatagaattattataaatttgtcttggtgtaaaaaacaaaaaaaaggatggtacttatctagtgtcata  1245300
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AGI:  At4g02780.1   
Description:  GA1 (GA REQUIRING 1); ent-copalyl diphosphate synthase. Identical to Ent-kaurene synthase A, chloroplast precursor (GA1) [Arabidopsis Thaliana] (GB:Q38802); similar to GA2 (GA REQUIRING 2), ent-kaurene synthase [Arabidopsis thaliana] (TAIR:AT1G79460.1); similar to Ent-kaurene synthase A, chloroplast precursor (Ent-copalyl diphosphate synthase) (KSA) (GB:O04408); similar to putative copalyl diphosphate synthase [Scoparia dulcis] (GB:BAD91286.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22530.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930); contains InterPro dom
Range:  from: 1237767    to: 1244813    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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