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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<--------
ATHB1
-------->
HAHB4
<---------
ICU4
<---------
ATHB12
--------->
ICU4
<---------
YAB1
--->
CCA1(2)
--------->
MYB52(1)
----------->
GT1
--------->
YAB1
--------------------
-->
GT1
----------->
GT1
<---------
MYB46(3)
<----------
DOF2
---------------
------>
ANAC81
---------->
DOF2
--------->
GLK1(2)
<---------
TOE2(3)
---------->
DOF2
----
aacaaatcgaatttttgggaaagaaaaaaaaaacagagagaattttggagagtggttaatgattctataatgctttgaagaaagagaaaacaaaaaaaaa
1244400
<-------
GAMYB
--------->
ALFIN1
<---------
ANAC58
<---------
ANAC58
<---------
MYB46(3)
<---------
DEAR3(1)
--------->
ALFIN1
------->
MYC3
<-------
MYC3
===============
MYC_MYB
--------->
TGA1a
<---------
ANAC46
<---------
O2
--------->
O2
<---------
CCA1(1)
<---------
RVE1(1)
--------->
ARR11(3)
<---------
At4g35610
<---------
ANAC58
---------->
DOF2
<---------
ARR11(3)
=========================================
bZIP_DOF
---->
ANAC81
<---------
YAB1
<---------
ANAC58
--------->
ANAC81
<---------
YAB1
<---------
TGA1a
----->
AHL20(2)
--------->
ICU4
--------->
ANAC46
-----
aaaatcgaaaggaagatgatgatgagagatatttcacgcgtgggtgttgagagaacataaaaacagagtcatcactctaatttttgttttgttctctagg
1244500
--------->
ATHB12
<---------
ICU4
<---------
YAB1
--------->
ICU4
------>
MYB46(1)
--------->
YAB1
------>
MYB83
<------
ZmHOX2a(2)
<---------
MYB59
--------->
ARR11(3)
---------->
DOF2
--------->
MYB52(1)
<---------
YAB1
------------------------>
ANAC81
<---------
ATHB51
<---------
GLK1(2)
---------
------>
GT1
--------->
AtMYB61
<---------
ATHB12
--------->
ANAC46
----------
gaaaatcaaaaagaccaaacaaaaatttcagtcaaataatggatcatgattaaacccacaagagaatttcgattacaaaactcattagataaaaaaagtt
1244600
--------->
O2
<-----------------
AGL1
--------->
ARR14(3)
<---------
O2
--------->
ANAC58
==========================
bZIP_DOF
<---------
TGA1a
--------->
ARR14(2)
--------->
TGA1a
<---------
ARR14(3)
----------->
RAV1(2)
--------->
ARR11(3)
===============================
bZIP_DOF
<---------
ARR11(3)
--------->
ANAC58
<---------
At4g35610
<---------
ARR14(2)
--------->
AHL20(2)
--------->
ANAC58
--------->
At4g35610
----------->
ARR10
<----------
DOF2
------>
ZmHOX2a(2)
---------->
DOF2
--------->
ZAT2
---------->
DOF2
>
DAG2
--------->
ALFIN1
----------->
HVH21
<---------
ZAT2
<------
ZmHOX2a(1)
>
DOF2
<---------
AHL20(2)
<---------
TOE1(2)
<------
ZmHOX2a(1)
--------->
ANAC58
tgagactttatataaacaagtgtgtgatcgtatgtctctgacaagacaaagagagagaggatgactcac
ctgagatggtaaggaaagaagaagatattgt
1244700
<----------
DOF2
--------->
DAG2
<---------
YAB1
<---------
O2
<-----------
GT1
<---------
AGP1
<---------
ANAC46
<---------
ZAT14
---------->
DOF2
tgttttagtagaactgagaaaggttgtacttggaatggagtttagaacatgatactgaagagacat
ggctttaaaaagctctgttttctctgtctaagta
1244800
------>
MYB46(1)
------>
MYB83
--------->
ARR14(2)
<---------
ARR14(2)
<------
MYB46(1)
<------
ZmHOX2a(1)
<---------
YAB1
<----------
ID1
<----
--------->
ICU4
<------
MYB83
<---------
AHL20(2)
--------->
ANAC46
*
TSS
------->
TEIL
--------->
YAB1
--------->
DEAR3(1)
--------->
CCA1(2)
---------->
DOF2
<-----------
TBP
--------->
DEAR3(2)
tttagtgaagaag
agatgatgaaactatttggtgagaaagagagagagagagaagtcttaatgggtatttataaggacagaaccgacttcacatcagaga
1244900
--------->
ANAC55(2)
--------->
ANAC58
--------->
ANAC46
<---------
ANAC55(2)
--------->
ANAC58
---------->
DOF2
------>
ZmHOX2a(2)
<---------
HSFB2a(1)
--------->
HSFB2a(1)
<---------
HSFC1(2)
<------
ZmHOX2a(2)
--------->
HSFC1(2)
<---------
AtLEC2
<---------
ARR11(3)
--------->
CCA1(2)
--------->
ARR14(2)
---------->
DOF2
--------->
ARR14(2)
--------->
ARR11(3)
--
<-----------
GT1
<---------
ARR14(2)
<---------
ARR14(2)
---
--------
CBF
<----------
DOF2
<------
ZmHOX2a(1)
<-----------
RAV1(1)
<---------
LBD16
ttgtgtttcattttactctttgagaaagaagagagagagagagaaggatatgatgcatggaatgtgtttttgtgggatcttccaaagctacggaattgaa
1245000
--------->
MYB52(1)
<---------
ICU4
<---------
AHL20(2)
<---------
DAG2
<---------
ATHB51
<----------
DOF2
--------->
AHL20(1)
<---------
ANAC58
<-----------
GT1
--------->
YAB1
--------
<---------
ANAC58
--------->
ARR11(3)
--------->
AHL20(2)
<-------
---------->
ID1
<---------
ARR11(3)
<---------
AHL20(2)
<--------
------->
At5g28300
------>
ZmHOX2a(1)
<----------
DOF2
--------->
YAB1
<--------
-------->
GT1
<-----------
GT1
<---------
CCA1(2)
<---------
AHL20(2)
--------->
DAG2
-
gggtaaatttggctttttcttctatttcctattctcttgtttatatctcttttacaacttgatttttttttataaaaataatggcataaggtcgatatct
1245100
<---------
TOE1(3)
--------->
ICU4
--------->
ZAT14
<--------
ATHB1
<-------
TEIL
--------->
YAB1
<---------
ZAT14
<---------
AHL20(1)
--------->
ZAT18
<---------
ICU4
<---------
ZAT18
--------->
ATHB51
--------------->
AtSPL8
--------->
AHL20(2)
--------->
ICU4
<---------------
AtSPL8
<---------
CCA1(2)
<---------
TOE2(3)
--------->
MYB59
->
ARR11(3)
--------->
YAB1
<---------
ATHB51
<---------
YAB1
--
ARR11(3)
<---------
CCA1(2)
--------->
ICU4
--------->
ARR11(3)
<
-
CCA1(2)
--------->
YAB1
--------->
ANAC58
<---------
ARR11(3)
<
-
GLK1(1)
--------->
TOE1(2)
<---------
ICU4
--------->
ANAC58
----------->
GT1
<------
ZmHOX2a(1)
--------->
DOF2
<-------
TEIL
<---------
ATHB12
<---------
ATHB12
---------->
DOF2
<
ttgaaagtacacacacacatacacatacgagggcttctaatcatatcatatcacaaacaataatttttaaggtcgtaaaagataattaggaaacaatatt
1245200
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
<---------
YAB1
<------
MYB46(1)
--------->
bZIP60(2)
--------->
YAB1
----------->
GT1
--------->
ANAC58
-------->
ATHB1
<------
MYB83
--------->
ANAC58
<--------
HAHB4
<---------------
AtSPL8
----------->
HVH21
--------->
ATHB51
----------->
GT1
<---------------
AtSPL3
---------
ANAC46
<---------
ICU4
<---------
ANAC46
--------------->
AtSPL8
---
---------
ANAC58
<---------
YAB1
<---------
ANAC58
<------
ZmHOX2a(1)
<---------
---------
ANAC58
<---------
YAB1
--------->
ICU4
<---------
ANAC58
---------->
DOF2
<---------
ZAT6
tgtcgtgtgacaagtcatatatgactattgcaatagaattattataaatttgtcttggtgtaaaaaacaaaaaaaaggatggtacttatctagtgtcata
1245300
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AGI:
At4g02780.1
Description:
GA1 (GA REQUIRING 1); ent-copalyl diphosphate synthase. Identical to Ent-kaurene synthase A, chloroplast precursor (GA1) [Arabidopsis Thaliana] (GB:Q38802); similar to GA2 (GA REQUIRING 2), ent-kaurene synthase [Arabidopsis thaliana] (TAIR:AT1G79460.1); similar to Ent-kaurene synthase A, chloroplast precursor (Ent-copalyl diphosphate synthase) (KSA) (GB:O04408); similar to putative copalyl diphosphate synthase [Scoparia dulcis] (GB:BAD91286.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22530.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930); contains InterPro dom
Range:
from: 1237767
to: 1244813
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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