AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                                                               -----
                                                                                               -----
                                                                                               -----
                                                                                              ------
                                             <---------ARR11(3)                              <------
                                             --------->AHL20(1)                             --------
             <-------TEIL                    --------->ARR11(3)                             --------
            --------->GLK1(2)               --------->CCA1(2)                            <---------MYB52(1)
            --------->CCA1(2)              --------->ARR11(3)          <---------------AtSPL8-------
         <---------TOE2(3)                 --------->ARR14(2)      <----------DOF2      --------->LBD16
     <----------DOF2                       <---------ARR14(2)   ------>NtERF2         <---------LBD16
   --------->ZAT18                         <---------ARR11(3) <---------ANAC58      --------->GLK1(2)
<---------At4g35610               <---------WOX13(1)          <---------ANAC58      <---------ARR14(2)
 
tccaactgctctaagattcaggtctaaacaagaagagattgatgcagatatattcagaaacaattgctggctataatgtacagagaaattccggtaccca  1075500
       --------->TOE1(3)
------>RAV1(1)
->MYB83--------->TOE2(3)                  <---------At4g35610
->MYB46(1)                         <---------AHL20(2)
--->ANAC46                        <---------AHL20(2)           ---------->DOF2
---MYB59           --------->AHL20(2)     --------->At4g35610 --------->YAB1
->ANAC58     --------->TOE2(3)    --------->AHL20(2)  --------->GLK1(1)                      -------
->ANAC58     ------->GAMYB--------->TOE2(3)          <------ZmHOX2a(1)  --------->ZAT6  ----------->GT1
-->MYB46(3)-------->P     --------->TOE1(3)    --------->YAB1<---------ATHB12    --------->MYB52(1)
 
acacaataaaccctaaccccaatttaaaaccctaaaatttttttcagcagtcatcaggaatccaatgaaagcgtagcactaaatcaaccgattgaaaaaa  1075600
                                                           ---------->DOF2
                                                         --------->MYB46(3)
                                                       ----------->RAV1(1)
                --------->GLK1(1)                     <----------ID1
           --------->LBD16                          --------->ANAC58     ------->TEIL
     --------->ARR14(2)                             --------->ANAC58     --------->GLK1(2)
     <---------ARR14(2)         ----------->GT1   ---------->DOF2--------->ANAC58
     <---------GLK1(2)       --------->ICU4   --------->ZAT18    --------->ANAC58--------->ANAC58
--->DOF2 <---------LBD16----------->GT1<---------------------WRI1--------->ANAC46--------->ANAC58
 
gaaaccaagattcccagagaaacccatgagtaaaaatgaaaaattgaagtgaacaaagcaacaaaagcacgaaatgaatctgagaagcacgatttatcga  1075700
                  ------>ZmHOX2a(2)
                  ============================HOX2a_HOX2a
                 <------ZmHOX2a(2)
                 =============================HOX2a_HOX2a
                --------->ARR11(3)
                <---------ARR11(3)
                --------->ARR14(2)
                <---------ARR14(2)                                 <---------HSFB2a(2)
            ---------->DOF2              <---------GLK1(1)         --------->HSFB2a(2)
        <---------TOE2(3)                --------->GLK1(1)   <---------ICU4
        --------->MYB59                <------ZmHOX2a(1)    <---------YAB1
        <---------TOE1(3)          ---------->DOF2   <-----------GT1               <------ZmHOX2a(1)
 
agggaagagtttaggtaaagatccctagagagaagagaaaaaggatttcttatttgttacctcatgtttactggaaaactgttgaaggagaaccctagag  1075800
                   <---------ANAC46
                   --------->ANAC58
                   --------->ANAC58
                ----------->HVH21                <---------ANAC46
                ----------->TGA1                 <---------ANAC58
               <-----------HVH21            <---------ANAC58
           --------->MYB52(1)      <---------AHL20(2)  ------>ZmHOX2a(2)
         --------->ANAC58        <---------RVE1(1)<----------DOF2
         --------->ANAC58      ===============================HOX2a_HOX2a             <---------ALFIN1
    <---------ARR14(2)         <------ZmHOX2a(1) <---------ANAC58           <---------MYB52(1)
    --------->ARR14(2)  --------->ICU4      <---------ANAC58               <----------DOF2  *TSS   <
   <------ZmHOX2a(1)  ---------->DOF2     <-----------GT1      ---------->DOF2    --------->At4g35610
 
agaagaggaaacacgaacggtgacgcaaagattaggattttttttttacttggcttgatcgagagagaaagacttctcctttagtagctccacatagttt  1075900
                                                      <-----------HVH21
                                                      <---------PCF2
                                                     <------MYB83
                                                     <------MYB46(1)
                                                    --------->MYB59
                                                    <---------MYB46(3)
                                                   --------->ALFIN1
                                                 <------MYB46(1)
                                                 <---------ANAC46
                                                 <------MYB83
                                                 <---------ANAC58
                                                 <---------ANAC58                    <---------ANAC58
                                                --------->MYB46(2)                   <---------ANAC46
                                                --------->MYB59                      <---------ANAC58
                                         --------->YAB1                          <---------At5g28300
                               <---------STY1(2)--------->MYB52(2)            --------->DOF5.7(2)
                               --------->STY1(2)--------->MYB111(1)         <---------ANAC58
                              --------->ANAC58  --------->MYB55(2)          <---------ANAC58
                              --------->ANAC58  --------->MYB111(2)         <---------ANAC46
                              --------->ANAC46  <---------AtMYB61        ----------->TGA1
                           <---------REM1(2)  <---------MYB52(1)         ----------->HVH21
-----------TBP          ------>ZmHOX2a(1)<---------ANAC46           --------->MYB52(1)
 
gtgtttatagggctcggagcatttatcctctacaagctagtgtatcgtagttaggtgggtcacgaagaatcaaacggtgacgtttactgcgttttagatg  1076000
                                                                           <----------DOF2
            <---------TOE2(3)                <---------YAB1                <---------------AGL15
            <---------TOE1(3)  --------->ZAT18                           ---------->ID1
  --------->GLK1(1)            --------->ZAT14            <---------CCA1(2)--------------->AGL15
  <---------GLK1(1)            <---------ZAT14 <---------GLK1(2)     <----------DOF2
<------ZmHOX2a(1)      <----------DOF2     <---------At4g35610  <----------DOF2               <-----
 
gaaggatttcattttagggtttaagacttttaagtggactgttctcttctgattctgaagcatctctcttttctttttctttttttagccaaaatttgag  1076100
                                                                                            --------
                                                                                            <-------
                                                                          --------->ANAC55(2)
         <---------ATHB12    <---------MYB52(1)          ---------->DOF2  <---------ANAC55(2)<------ZmHOX2a(2)
<---------YAB1             ----------->GT1        ------------------------>ANAC81----------->HVH21
----TOE2(3)          --------->AtMYB61       --------->ANAC46           <-----------GT1 ---------->DOF2
 
ataatttttgaaatcaatggaaaaccacaactgttaatttgttttttcacgagaagtaatcaaaggaaaatgaaattacctgttgtgaccaaaaagatca  1076200
                                                                 <---------GLK1(2)
                                                                 --------->ARR14(2)
                                                              <---------TOE1(3)                   <-
                                                          --------->YAB1                        <---
                                  <-----------GT1   --------->YAB1                              <---
                               --------->YAB1  ------>ZmHOX2a(1) <---------ARR14(2)        ---------
                       >>>>>>>>>ARR2     --------->ALFIN1 --------->TOE1(3)                <--------
                       >>>>>>>>>ARR1     <---------ZAT6   --------->TOE2(3)        --------->TOE2(3)
                     <---------YAB1      --------->HSFB2a(1)  <---------TOE2(3)    --------->TOE1(3)
->ARR11(3)          <---------TOE2(3)------->GAMYB  --------->TOE2(3)             <---------ANAC55(2)
--ARR11(3)   <-----------GT1----------->GT1   --------->TOE2(3) <------ZmHOX2a(1)<-------TEIL   <---
 
tatagactaagacaatttacatttacgattgtagttataaccgagtgttcctcaatgttaatcttaaggattctcacatctaaatacgttaagacttttg  1076300
                                       <---------ICU4
                                       --------->ATHB12
                                      <---------YAB1
                                    <---------ICU4
                                    --------->YAB1
                                 --------->YAB1
                                 <---------ICU4
                              <---------ICU4
                             <---------YAB1                <---------ANAC55(2)
    --------->AtLEC2       --------->YAB1                  --------->ANAC55(2)
--------ZAT6            --------->YAB1--------->ICU4     <-----------RAV1(2)                   -----
------ANAC58     <-------GAMYB--------->YAB1        <-----------TGA1                <---------ZAT18
------ANAC58    <---------MYB46(3) <---------YAB1  --------->ETT(2)                 --------->ZAT18
-------------->TaNAC69(2)  <---------ICU4          --------->bZIP60(1)       <-----------HVH21 -----
--DOF2    <---------ATHB12<---------YAB1           <---------bZIP60(1)  --------->DAG2      --------
------ANAC46   <---------AtMYB61<---------YAB1    ---------->ID1       ---------->DOF2      --------
 
agtgttcatgccaatgagatggttgcatcatcatcatcatcatcattgacattgtcgtcatcaggtaatgtgagtaaagttgtcaagtccacaagatgac  1076400
<- Previous    Next ->

AGI:  At4g02450.1   
Description:  glycine-rich protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G03773.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39995.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain CS (InterPro:IPR007052)
Range:  from: 1073753    to: 1075893    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g02460.1   
Description:  DNA mismatch repair protein, putative. similar to ATMLH1 (ARABIDOPSIS THALIANA MUTL-HOMOLOGUE 1) [Arabidopsis thaliana] (TAIR:AT4G09140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39991.1); similar to Os02g0592300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047292.1); contains InterPro domain DNA mismatch repair protein, C-terminal; (InterPro:IPR013507); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain MutL, C-terminal, dimerisation (InterPro:IPR014790); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro doma
Range:  from: 1076136    to: 1080722    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version