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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                           --------->MYB46(3)
                         <-----------GT1
                      <---------ICU4
              <-----------GT1           --------->AHL20(2)
  <---------ANAC58    --------->YAB1    <---------AHL20(2)
  <---------ANAC58 ------>MYB46(1)      --------->AHL20(1)
<---------AHL20(2) ------>MYB83<---------ATHB12              <-----------GT1           <----------DOF2
<-----------GT1  <---------MYB59        <---------AHL20(1)<---------AHL20(2)        <-----------GT1
------>ARR14(2) --------->ANAC46--------->AHL20(2)      <---------AHL20(2)          <---------AHL20(2)
-------ARR14(2) --------->ANAC55(2)  --------->YAB1  ------->TEIL<----------DOF2 ------->TEIL
 
tattttcttgtttatattcacctaataataaccaatgaaataataaaatacaaatgtatattattttccttttggtcacaaatgtattttcttttccctt  984800
                                                                                       --------->YAB1
                          --------->AHL20(2)                                           <--------ATHB1
                    --------->AHL20(1)                                                 <---------ICU4
                    <---------AHL20(2)                                                 -------->HAHB4
                    --------->AHL20(2)             <---------ANAC58                   --------->ICU4
               --------->AHL20(2)                  <---------ANAC58                   <---------ATHB51
               <---------AHL20(2)                  <---------ANAC46                 --------->YAB1
               --------->AHL20(1)          ------>ZmHOX2a(1)           <---------TOE2(3)         <--
               <---------AHL20(1)       <---------YAB1          <---------YAB1     <---------AHL20(2)
         --------->ANAC46--------->YAB1<-----------GT1        <-----------GT1      --------->AHL20(2)
   --------->AHL20(2)   --------->AHL20(2) <----------DOF2   <---------AHL20(2)   --------->AHL20(2)
 
cttatattatatacacaataaaataaaataaaaatatgaaattatcctttttttgtgtggacattttatcatttaagaaaatgaaattaataattctaaa  984900
                                            --------->ANAC58
                                            --------->ANAC58
                                            --------->ANAC46
                                        <-----------GT1
                                     <---------ICU4
                                    --------->AHL20(2)
                                 <---------AHL20(2)
                                <---------AHL20(2)                              ------>ZmHOX2a(1)
                            <---------AHL20(2)                                 --------->TOE2(3)
                            --------->AHL20(1)                           <---------YAB1
                            --------->AHL20(2)                           <---------AHL20(2)
          <---------YAB1   --------->AHL20(2)                    --------->WOX13(1)
   --------->TOE2(3)       <---------AHL20(2)         --------->AHL20(2)--------->AHL20(2)
   --------->YAB1    ----------->GT1<---------AHL20(2)<---------AHL20(2)<---------AHL20(1)
---------GT1   --------->YAB1   --------->AHL20(2)   --------->AHL20(2) --------->AHL20(1)        <-
 
ttactatcttattacaaatgaaaattgtaaattaattaaatatttacaagcatccatataattttggtcattcaatataattcctaaatactaaaaacta  985000
           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        --
       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       <---
      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     -------
      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                    <------
     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                    --------
     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                 <---------AHL20(2)
    <------------------------ANAC81                                                  --------->AHL20(1)
 <---------DAG2                                                 <---------AHL20(2)   <---------ARR11(3)
 <----------DOF2                  --------->TOE1(3)      --------->DAG2            --------->GLK1(2)
----------GT1                     --------->TOE2(3)     ---------->DOF2  ---------->DOF2--------->AHL20(2)
 
ttgactttttttttttttttttttttttttttgtaaaccctaaaaactattgactaaaaaaaagtattttaacagaaaaagaagagaatatataatttta  985100
                      <---------ARR11(3)
                      --------->ARR11(3)
            ----------->GT1
     --------------->AGL15
     <---------------AGL15
    ----------------->AGL2
    ==================================================MADS_MADS
    <-----------------AGL1                                       <---------ANAC58
    ----------------->AG                                         ==============================RAV
    ----------------->AGL1                             --------->SPL7                           <---
  <---------WRKY18(1)--------->RVE1(1)    <----------DOF2        ==================RAV          <---
------->ATHB12       --------->CCA1(1)<----------DOF2----------->HVH21             ----------->RAV1(2)
------TOE2(3)    --------->AHL20(2)   <---------------AGL15      <---------ANAC58 --------->MYB52(1)
-->AHL20(2) <----------ID1            --------------->AGL15      <-----------RAV1(1)            ----
---AHL20(2)----------->GT1         <-----------GT1   <---------SPL7               -------->P    <---
->YAB1  ---------->DOF2    ---------->DOF2--------------------->WRI1   <-----------RAV1(2)     <----
 
atgtttgaccacaaagggaaaaaaatatctcaaagttttttctttctttggtatatcggacggtatttgtgtggccagggagggctacctgagactccat  985200
                                                                <---------CCA1(2)
           <<<<<<<<<TBF1                            <---------ZAT14                                -
------ARR14(2)                              <<<<<<<<<TBF1     <---------ANAC58                 -----
------ARR11(1)                  <---------At4g35610 --------->ZAT14                            <----
----->ARR14(2)         ------>ZmHOX2a(1) <<<<<<<<<TBF1        <---------ANAC58                <-----
------ARR11(3)   <<<<<<<<<TBF1  ------>ZmHOX2a(1) --------->ANAC46                    --------->YAB1
-----CCA1(2)  <<<<<<<<<TBF1    *TSS<---------At4g35610    --------->ALFIN1           <---------ATHB12
 
atctgtctctcttcttcttcttcttcctcttcttcctctgcttcttcttcttcacatcactgtgtgcgtctctctatctctctattctatcatttcgaaa  985300
          <---------ARR14(2)
          --------->ARR14(2)                                        --------->GLK1(2)              -
----->ZmHOX2a(1)                                                    <---------ARR14(2) <---------ANAC58
---->ARR14(2)                          <---------ARR11(3)           --------->ARR14(2) <---------ANAC58
-----ARR14(2)                    ---------->DOF2                   <---------GLK1(2) --------->ARR11(3)
----GLK1(1)          <---------CCA1(2) --------->ARR11(3)      <---------LBD16     XXXXXXXXXXXXXXXXX
 
tcctctctatccgaatttgaactcgtctcttcttcgtaaagagttcttaatctccgtctctgtgatttcggaatctggaggttttgaatttcttgttcgt  985400
                                                                                 -------------------
                                                                          <---------ANAC46
                                                                          <---------ANAC58
                                                                          <---------ANAC58
                                                                         <-------TEIL
                                                                         --------->ABI4(2)
                                                                       <---------MYB52(1)
                                                                      --------->At4g35610
                                                                      <---------At4g35610
            <---------ARR14(2)      --------->TOE2(3)                <---------DEAR3(1)
          <---------MYB46(3)     <-----------GT1                    <---------LBD16
  --------->YAB1               <---------DAG2                     <-----------HVH21      ---------->ID1
 <---------ATHB12             <---------ANAC58                    --------->ARR14(2)     <---------CCA1(2)
-------->WOX13(1)             <---------ANAC58         <---------At4g35610----------------------->TaNAC69(2)
XXX>MIR837-5P ------>ZmHOX2a(2)<----------DOF2 <---------ATHB12   <---------ARR14(2) <---------MYB52(1)
 
atcaatcaaatggtggatcgatttagtgagattgctttacctcattagcaatgacttctgcttcttccatgtccggtgcgttttcttcgttcgtctctct  985500
                                                        <---------GLK1(2)
                                                      <---------YAB1
                                                   ----------->HVH21
                                                   ----------->TGA1
                         ---------->DOF2       <----------DOF2
                   --------->MYB52(2)        <---------HSFB2a(1)
<---------AHL20(2)<-------TEIL               --------->HSFC1(2)
-->WRI1    <-----------GT1      <------NtERF2<---------HSFC1(2)              <---------MYB52(1)
 
gatttttttttttttttcatgttcgtttcaaaggcagagtttaggggaagctttgtgacgattcttctgttcttctctctgtttgtttgaattcagtagc  985600
        <---------ANAC58                                                   <---------TOE2(3)
        <---------ANAC58           --------->TOE1(3)                <---------ANAC46   <---------ANAC58
        <---------ANAC46       <-----------GT1                      ----------->GT1    <---------ANAC58
 <---------ANAC46       <---------At4g35610                    <---------YAB1 --------->GLK1(2)
 
aattgtgtattgcgtcttaacgtcttaagctaatatacccttaagactgtgtgatttttcttagttatgagtcgtattaagaatccaattgcttcgtttt  985700
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AGI:  At4g02260.1   
Description:  RSH1 (RELA-SPOT HOMOLOG); catalytic. similar to RSH3 (RELA/SPOT HOMOLOG 3), catalytic [Arabidopsis thaliana] (TAIR:AT1G54130.1); similar to RelA-SpoT like protein RSH1 [Nicotiana tabacum] (GB:BAC76004.1); similar to hypothetical protein OsJ_010350 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26867.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ59467.1); contains InterPro domain Metal-dependent phosphohydrolase, HD region; (InterPro:IPR003607); contains InterPro domain TGS (InterPro:IPR004095); contains InterPro domain Metal-dependent phosphohydrolase, HD region, subdomain (InterPro:IPR006674); contains InterP
Range:  from: 985232    to: 991494    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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