Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ----------->GT1            --------->ANAC46  --------->TOE2(3)                                     ------>ZmHOX2a(2)            --------->bZIP60(2)       <----------DOF2                            --------->ATHB12         <---------ZAT18     --------->YAB1        <---------ICU4               <---------YAB1         --------->ZAT18 --------->AHL20(2)       <---------ATHB12            --------->YAB1    ---------->DOF2      <---------AHL20(2) <-----------GT1                  --------->ICU4         - -------->TOE1(2)  --------->ANAC46   <---------DAG2                     --------->AHL20(2)   -------   atccagcgaagcgcacatcacacaaaattaaacataaatacttttttttcaaatcatttcgaaaccaaaaaaaaaaaaaatgatgatcggaaaaattgat  916100            >>>>>>>>>>GT-3b         --------->ANAC58         --------->ANAC58     --------->ANAC58  ----------->RAV1(2)     --------->ANAC58 --------->MYB52(1)    --------->DAG2    ------->TEIL                <-----------GT1   ---------->DOF2--------->DAG2      <-----------GT1              --------->AtMYB61 -------->YAB1   ---------->DOF2   <---------GLK1(1)  <----------DOF2------>MYB46(1)         -------- -->YAB1 ----------->GT1           --------->GLK1(1)  <---------DAG2 ------>MYB83          <---------   aatcaaaaagcaagaaaaataaagtacctgaagacagatttcacaagttgtgtttcctttttcattacaccaacgttgtatgcagtttctatgtgcgaac  916200                                                                       <------MYB83                                                                       <------MYB46(1)                                                                       <---------MYB46(3)                                                                       <---------DEAR3(2)                                                                      --------->MYB111(1)                                                                      <---------AtMYB61                                                                     <--------P                                                                    <-------GAMYB                                                                   --------->ATHB12                                                                   <---------MYB46(3)<---------DOF5.7(2)                                                                <---------ANAC58     --------->MYB52(1)                                                                <---------ANAC58  --------->TOE2(3)                                                            <---------------AGL15 --------->TOE1(3) -                                                            <----------DOF2    <-----------GT1      - ->ZAT18                                                  <------------------------ANAC81   --------- ------------WRI1        <---------MYB52(1)<---------ZAT6<-----------GT1    <----------DOF2------>NtERF2   tgatcaaacaaaacaaaacaaaactccattagtttcaaattttgagagttaagagtttttttcttttcttggttggttcttttaccttaacggtgcctga  916300                                                                                         <---------ATHB12                                                                                       --------->WOX13(1)                                                                                     <---------YAB1                                                             <---------GLK1(2)     --------->YAB1     <-------MYC3                                        >>>>>>>>CAMTA3         <---------CCA1(2)     ------->MYC2                                        <---------ANAC55(2)  <---------ANAC58     <-------MYC2                             <---------ARR14(2)              <---------ANAC46     ------->MYC3                     <---------AtLEC2   --------->ANAC55(2)  <---------ANAC58 -------->ANAC58                  <<<<<<<<<TBF1--------->GLK1(2)              <---------ANAC55(2) -------->ANAC58               <<<<<<<<<TBF1  --------->ARR14(2)              --------->ANAC55(2)  <- -------->AGL1              <<<<<<<<<TBF1     <---------GLK1(2)      <----------DOF2--------->TOE2(3)   acaagcacatggaacttcgaagaaactttcttcttcttcttcatggcaaattctgcaacgcgtgattctcactttcgatttcgtatcatcaatgaacaaa  916400            <----------DOF2 ----------GT1       <---------MYB46(3)                  <---------MYB52(1) *TSS   atcacatctcccatctttatcgatggttttgaattttctgtaaatttcttcgtggctctgttttttttttttttttgaaaaactttgctctgtttttgtt  916500                                                  <----------DOF2                                            --------->ANAC46              <---------MYB52(1)              <----------DOF2         --------->AHL20(2)              <-----------GT1          <------ZmHOX2a(1)           ----------->TBP     --------->ARR14(2)        --------->ALFIN1            <----------DOF2       <---------ARR14(2) --------->At4g35610  <------NtERF2 <---------DAG2<---------DAG2     <-----------GT1   <----------DOF2   atcttctgaagaggagctttaggcagaggggtctgcaactttatatacacagctttttcgaattctctattttacccttacttatatttcttttattcaa  916600                                                                                         <---------ANAC58                <-----------GT1               <---------ICU4        ------->MYC3         <---------ANAC46               <-----------GT1           --------->AHL20(2)         <-------MYC3         <---------ANAC58     <---------ARR11(3)                  <---------AHL20(2)    <-----------GT1      <<<<<<<<<TBF1  <-     --------->ARR11(3)                 <---------ATHB12 --------->STY1(2)     <----------DOF2     --   attccaatatcatgtttttaacgtctaattcagtaattcccaataaaatcattttccctagctattaacatgtgttttcttctttcttcttccttggaaa  916700                                                      --------->AHL20(2)                                                 <---------TOE2(3)                                               --------->AHL20(2)                                               <---------AHL20(2)                                              --------->ICU4                              --------->AHL20(2)                                           --------->AHL20(2)                             <---------AHL20(2)                <---------YAB1             <---------YAB1                                --------->AHL20(2)             <---------AHL20(2)            <---------AHL20(2)                            --------->AHL20(1)     --------->AHL20(1)          --------->AHL20(2)   <---------AHL20(2)  <---------AHL20(2)     --------->AHL20(2)          <---------AHL20(2)<---------ICU4         --------->AHL20(2)     <---------AHL20(2)    --------->YAB1 --------->AHL20(1)             <---------AHL20(2)    --------->AHL20(2)     --------->TOE2(3)  <---------YAB1         <---------AHL20(2)  <---------AHL20(2) --------AHL20(2)         <---------YAB1  <---------AHL20(1)         --------->AHL20(2)  <---------AHL20(1) ------->AHL20(2)        <---------TOE2(3)--------->AHL20(2)    --------->ICU4   ----------->GT1<----   attaaaaaaaattgttttattcttgtttatgttaattaatagaatataattaatatttattttgtattgattttatttatttgtagtaaaatttaattgt  916800                <---------AHL20(2)               <---------AHL20(2)           --------->ATHB12           <---------ICU4          --------->ICU4          <---------YAB1        --------->YAB1       <---------AHL20(2)                                             --------->YAB1      --------->AHL20(2)                                             <---------YAB1      <---------AHL20(2)                                          <---------AHL20(2)           ------      --------->AHL20(1)                  <---------ZAT6          <---------YAB1              <------      <---------AHL20(1)             <---------REM1(1)<---------AHL20(2)                   --------->AHL20(2) -----TOE2(3)  --------->AHL20(2) <-----------RAV1(1) --------->AHL20(2)<---------YAB1     <---------AHL20(2)   ggtttcaatataatgattttaattttagaacaaaatttgttgtagtctaaatagattaaaatccattttttattatgaaatttttgttcatttttaatta  916900                                <---------YAB1                              --------->AHL20(2)                --------->AHL20(2)                <---------AHL20(2)        ----------->GT1               <---------AHL20(2)        ----------->GT1               --------->AHL20(2)      <--------P      --------->YAB1          <---------ICU4 <---------ARR11(3)          --------->ICU4                               <---------YAB1 --------->ARR11(3)          <---------YAB1                             ----------->GT1 <---------GLK1(2)        --------->AHL20(2)                            --------->YAB1 --->YAB1   <---------AHL20(2)--------->ATHB51                         --------->ICU4          ------ ---YAB1    --------->AHL20(2)<---------AHL20(2)             <---------YAB1  <---------YAB1 ---------   taagattttcatattaaaaaaatttgaagtaattatttttggtaagttaaaaattcttcaaatatgtttggcaattgttattagaaacttagaatcatca  917000  Previous    Next  AGI:  At4g02075.1    Description:  PIT1 (PITCHOUN 1); protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G02960.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G02960.4); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G02960.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO40102.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; ( Range:  from: 913419    to: 916476    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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