Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <----------DOF2                                                     <-----------GT1     <---------ANAC55(2)                                             --------->YAB1<---------ANAC58                                            --------->KAN4(1)        <-----------HVH21                                            <---------KAN4(1) -------->P --------->ANAC55(2)                            --------->AHL20(2)--------->GLK1(2)  ----------->RAV1(2)           ------             ---------->DOF2--------->YAB1 <---------KAN4(2) <-----------GT1                   <----- ---------DOF2   ---------->DOF2         <------ZmHOX2a(1) <---------ANAC58               -----------   tctttttttaagacccaaagaaagaaacaatgaaattcgactaggaataatctttttactttcttacccctggtcacgttttccacgatgaacagaaatt  819600                                     <---------AHL20(2)                            <---------ICU4    ---------->DOF2             <---------AHL20(2)                              --------->YAB1    <---------ZAT14            --------->AHL20(2)                              --------->AHL20(2) <---------ANAC46              <---------AHL20(2)                              <---------AHL20(2) ----------->GT1  <----------DOF2   --------->AHL20(2)                        --------->AHL20(2) --->ICU4      <-----------GT1<---------WOX13(1)     ----------->GT1   <---------TOE1(3)            < ----ATHB51    <---------AHL20(2)   <---------AHL20(2)                 <---------TOE2(3)<------------CBF >GT1   ----------->GT1    <---------YAB1----------->GT1       <----------DOF2<---------AHL20(2)    -   atggagtaaagagttattaactttgatatatgattaatttaaattgaaaaatgtatggttttattctttatttaagggaatttaataatgtattggtttg  819700                                                                                                 <---                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                               <---------WOX13(1)             <------                                                              <------------CBF         ----------->GT1                                                 <<<<<<<ZML2<---------YAB1          --------->CCA1(2)                                              <---------HSFC1(1)                   <---------ARR11(3)                                              --------->HSFC1(1)                   --------->ARR11(3)                          --------->YAB1 <----------DOF2    <---------AHL20(2)  <---------------AGL15 ---------ARR14(2)        --------->AHL20(2)  <---------HSFB2a(2)               --------------->AGL15 -------->ARR14(2)        <---------AHL20(2)  --------->HSFB2a(2)           --------->AHL20(2)-------   tggattttggtttcacttagaaatctaattaaaactatatgttcttttctagaacacattttttaattgaaatacaaataaactagatatagaaaaataa  819800        <---------YAB1   ----------->GT1                                       ------------>CBF ---------CBF                                      <---------ALFIN1 ----AHL20(1)                                    --------->AtMYB61 --->AHL20(1)                                    <---------ALFIN1 --->AHL20(2)                                 <-----------GT1                    --------->TOE1(3) ----AHL20(2)                            <---------YAB1 --------->ANAC46  ------>ZmHOX2a(1) ---AHL20(2)             <----------DOF2<---------ARR11(3)      <-------TEIL---------->DOF2    ------ -->AHL20(2)  ------------>CBF          --------->ARR11(3)     <-----------GT1   --------->TOE2(3)---   attggaggttataagtggcaatttagtcttttctaataccattatctttcaccactcccctcaatatacatttctcctaaaaaccctaaattccaaaaac  819900                                                                                                   <-                                                                                          <------ZmHOX2a(2)    ----------->GT1            <<<<<<<<<TBF1             ------->TEIL                   <------ZmHOX2a(1)  ---------->DOF2        <<<<<<<<<TBF1             --------->ICU4  ----------->GT1      ============= ------------------>ANAC81  <<<<<<<<<TBF1         --------->ARR11(3)     --------->MYB52(1)<---------WRKY12 ------->DOF2         <<<<<<<<<TBF1         ---------->DOF2       >>>>>>>>>TBF1     ---------->DOF2<-   aaaagaaagaaaaacaaaactttcttcttcttcttcttcaccatcgaaaagagataatgaaccaagaagaagaaaaaacagagaacaaaaggatcaacga  820000                                                                                                    <              >>>>>>>>>TBF1                                              <------ZmHOX2a(1)         -- -----ZmHOX2a(2)                                                    --------->MYB52(1)             <- =====HOX2a_HOX2a                                                   -------->P             <--------- --------------------WRI1                                   --------->AHL20(2)     --------->MYB52(1)   gatcgatgaagacgaagaagaagagttggagaacaagaagatggacatgttcttcaatctcattaaaaactaccaggatgctaagaaacgaagacgacaa  820100                                              ==========================HOX2a_HOX2a                         <---------ANAC46     ------>ZmHOX2a(2)                         <---------ANAC58    ===========================HOX2a_HOX2a                         <---------ANAC58    <------ZmHOX2a(2)                    <---------O2            <---------ARR14(2)                        <-----------GT1                    --------->O2            --------->ARR14(2)                    <---------GLK1(2)                    <---------bZIP60(2)     --------->ARR11(3)                    --------->ARR11(3)                    <---------TGA1a         <---------ARR11(3)             <---------ZAT2                 ----------->HVH21          --------->AGP1                 --------->At4g35610           --------->GLK1(2)               --------->GLK1(1)               --------->ZAT2          <---------ARR11(3)               <---------GLK1(1)             --------->LBD16          <---------ARR14(2)       ------>NtERF2                        <---------ANAC46          --------->ARR11(3)       <---------RAP2.6(3)                  <---------ANAC58          --------->ARR14(2)       --------->ORA47(1)                   <---------ANAC58 ---------MYB59  <---------ETT(2) --------->DEAR3(1)                    <---------ANAC55(1) ------->ANAC55(2) <------NtERF2  <---------ETT(1)                      --------->ANAC55(2) --------ANAC55(2)------>NtERF2  --------->DEAR3(2) <---------ZAT14     <---------ANAC55(2) -ID1     <---------GLK1(2)     ------>NtERF2--------->CCA1(2)   ------>ZmHOX2a(1)<---------ARR11(3)-   tacttaactcaagattctggcgacgttgcttcgatgccgaccaagagatccgactacagcattgttcctgtattccgtgctgaagatttttctcactgta  820200                     <---------ARR14(2)                                 >>>>>>>>>TBF1                     --------->ARR14(2)                              >>>>>>>>>TBF1            --------->ANAC58                                      >>>>>>>>>TBF1          ---------->DOF2                                   <XXXXXXXXXXXXXXXXXXXXMIR838        --------->TOE2(3)    --------->ARR11(3)          --------->ANAC58                    >>>>>>>> ------>TEIL--------->ANAC58 <---------ARR11(3)          --------->ANAC58  >>>>>>>>>TBF1  >>>>>>>>>TBF1   tggacttaaacctaaagccatcgaattcgattatctccaccaagaaccaagaagaagagaagcaagaagaagaagaagaagaagatgatgaagaagaaga  820300                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        --------->ARR11(3)                                                        --------->AGP1              <----------DOF2                                                        <---------ARR11(3)   -------->HAHB4           <------ZmHOX2a(1)                            <---------AGP1       --------->YAB1      <---------YAB1                                  ----------->ARR10     --------->ICU4   --------->ICU4                           <---------ARR11(3)            --------->YAB1   <---------YAB1>>>>>>>>>TBF1          ---------->DOF2<---------CCA1(2) <---------YAB1 >TBF1<---------REM1(1)      --------->DAG2 --------->ARR11(3)         ----------->GT1   agatgatgatgaaggagaagaagaagttgagaaggtgatgagaaaagataatggtttagatcttaatcttgcattgtaataatacactttgttttttggt  820400               ----------->GT1              ---------->DOF2           --------->YAB1                <---------YAB1    <---------ANAC58                  --------->ICU4                       --------->At5g28300    ----------->GT1                  --------->TOE2(3)                    ----------->GT1         <--    <---------ANAC58              <-----------GT1             <---------AHL20(2)               <-----    <---------ANAC55(2)        <---------ICU4     ----------->HVH21  ---------->DOF2           ------    <---------ANAC46        --------->TOE2(3)   ----------->GT1   --------->TOE2(3)           ------- <---------MYB52(1)         --------->YAB1 <---------AHL20(2) --------->AHL20(2) --------->YAB1------   tctgtttcgtgaataagaagaaaaaaactttcttaattacattattaaaagagtgacattgcaattaaacttaaagcagtgaatcatcaagtcaagaagc  820500  Previous    Next  AGI:  At4g01895.1    Description:  systemic acquired resistance (SAR) regulator protein NIMIN-1-related. similar to NIMIN-1/NIMIN1, protein binding [Arabidopsis thaliana] (TAIR:AT1G02450.1) Range:  from: 819957    to: 820379    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g01897.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO40169.1); contains InterPro domain Protein of unknown function DUF952 (InterPro:IPR009297) Range:  from: 820336    to: 821505    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version