Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ------>ZmHOX2a(2)        --------->ARR11(3)    --------->At5g28300    <-------GAMYB <---------LBD16 ------ARR14(2) ----->ARR14(2)    --------->YAB1         --------->ARR11(3)                     --------->AHL20(2) < -->GT1 <---------ARR11(3)   ----------->GT1  <---------REM1(1)      <----------DOF2  <-----------GT1   atccacggttgatcttacaaataacaatagatggtcaaattgtagatgttgtagtagtagtagccatttttctttaaaaacttttaaataacaaaactca  756000                                        <---------ATHB12                                      --------->WOX13(1)                                    <---------YAB1                                        --------->YAB1                                  -------->ATHB1                                    <------MYB83                                  <---------ICU4                                    --------->ANAC58                                 <---------AHL20(2)                                 --------->ANAC58                                 --------->AHL20(1)                                 <------MYB46(1)                                 --------->AHL20(2)                                --------->MYB46(2)                            --------->YAB1   --------->YAB1                       <---------MYB55(1)  xxxxxxxxxxxxxxxx>smallRNA(i)   <---------YAB1 <---------AHL20(2)                <--------P ---------YAB1  ---------->DOF2  --------->ICU4--------->AHL20(2)                <---------MYB52(1)   ttctcatcgtttaaaactaaaagacacaaatgaaaattattaatcaattttaaatttagttccaatacaatttttgaattttcggtaggcaaacataatt  756100                                                             <---------ANAC55(1)                                                             <---------ANAC46                                                             --------->ANAC55(2)                                                             <---------ANAC58                                                             <---------ANAC58                                                         <---------ANAC58                        <---------AHL20(2)    ----------->GT1<---------ANAC55(2)          -----------            <---------ALFIN1                  <---------ANAC58                           --------->DAG2      --------->WRKY12 <---------AHL20(1)     <---------ANAC58                          ---------->DOF2      --------->WRKY38(1)                     <---------ANAC55(2)                 --------->ATHB12    <---------At4g35610--------->AHL20(2)     <---------ANAC46                    <---------ICU4    --------->At4g35610<---------AHL20(2)   --------->MYB52(1)                    -------->ATHB1   <---------ANAC46<---------YAB1     <---------TOE2(3)  <---------ANAC58        <---------YAB1   ttgttgagttgactccacattctaatttttttttttttttaagaaataacgtgaatttttcttgcgtgttaactcatcttaaaatcattgaaaagtaata  756200                       <---------ANAC58                       <---------ANAC58                <---------YAB1               <---------AHL20(1)                                                           ---------         --------->TOE2(3)          <----------DOF2                        <------------CBF ------>ZmHOX2a(2)         --------->TOE1(3)  --------->ICU4             <XXXXXXXXXXXXXXXXXXXMIR156H          =========     --------->WRKY38(1) <------NtERF2--------->ATHB12 <----------DOF2---------->DOF2     --------->ARR11(3) >GT1--------->WRKY12  <---------ANAC46                <XXXXXXXXXXXXXXXXXXXXMIR157A-C     <---------ARR11(3)   ctccaagttgaccttaatatacttggcgtcaaaattggcttcattgtgcaagttgttcttttttttttttgtcaaagaattgtgcaagttgtgatcttaa  756300                                              <---------YAB1                                            --------->YAB1                       <------MYB46(1)                                           <---------YAB1                        <------MYB83                                         <---------ICU4                         --------->MYB59                                        --------->ICU4                  --------->ANAC58            <                                      --------->YAB1                    <---------YAB1              -                                     <-------TEIL                       --------->ANAC46        -----   --------->ATHB12              <---------TOE2(3)             *TSS     --------->ANAC58<-----------GT1 >YAB1   <------ZmHOX2a(1)       <---------YAB1             --------->ICU4   <---------STY1(2)  <---- ===============HOX2a_HOX2a      <---------TOE1(3)   ---------->DOF2 --------->ZAT18 <---------YAB1 <   taagttgattaggactggcaacttctgtcttatttaagattcattatcataagtgtaaagtaatgaagaagttcacgatagctaggtattatacaagttt  756400           --------->ZAT18           <---------ZAT18      <---------ANAC55(1)      <---------ANAC58      <---------ANAC46      <---------ANAC58                                          <---------CCA1(2) <---------AHL20(2)                                     <---------AHL20(2) ---------AHL20(1)                                     --------->AHL20(1) -------->AHL20(2)                                     <---------AHL20(1)           <---------ANAC58 ---->AHL20(2)                                       --------->AHL20(1) <---------ARR14(2) -----AHL20(2)       --------->DAG2         <----------DOF2  <-----------GT1        <---------ANAC58 ---------AHL20(2)  ---------->DOF2   <----------DOF2<---------AHL20(1) --------->ARR14(2)---------->DOF2   aattaatttcgtgtgtgctacttaaagtgctacgaagaaactttgacttttctaatatatatttctctatcttgaatccgattcaagcttgtgaaagtct  756500                  <-------GAMYB                 <-----------RAV1(1)           ---------->ID1         <-----------RAV1(1)                                --------->MYB46(3)     --------->GLK1(2)                                     ------>MYB46(1)     <---------ARR11(1)                                   ----------->RAV1(1)     --------->ARR11(3)                       ------->GAMYB------>MYB83     <-----------ARR10                       --------->MYB46(3) ------->GAMYB     <---------ARR14(2)                    --------->MYB52(1)  <---------MYB52(2)     <---------ARR11(3)             <------NtERF2       --------->MYB46(3)                  <--------     --------->ARR14(2)           <---------ANAC46    --------->REM1(1)                  <---------YAB1    <---------CCA1(2)    --------->REM1(1) ----------->RAV1(1) --------->MYB46(3)  ------>ZmHOX2a(1)   ctctgcaaatcttgttgctctgttgctacaacaatggcgcagaaacaacagacccttcaccaacaacgaccattctcttcttctcctcgttcttattctt  756600                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                   ------->GAMYB                                                 <---                              --------->LBD16                                                    ----                             --------->RAP2.6(2)                                                 <---                        ------>ZmHOX2a(1)                                                       <----                 <----------DOF2--------->MYB52(1)                                              <----           --------->SPL7    --------->ANAC46                                                  ------         <-----------HVH21   --------->ANAC58      ------>ZmHOX2a(1)     <---------DEAR3(1)   <------NtERF2        --------->DEAR3(1)   --------->ANAC58   ---------->ID1          ------>ZmHOX2a(1)    <------- --------->TOE2(3)     --------->TOE2(3)  ------>ZmHOX2a(1)             ============================= -YAB1 --------->DEAR3(2)   <---------LBD16 --------------------->WRI1  =============================   caatctcaaaccgtcccatctttctccttagccgcaacggtctcctccttgtccttctcgctctcttccttctcctcggtgtattcttaccttggcccgg  756700       ---------->ID1     --------->MYB52(2)     <---------MYB46(3)     <-----------RAV1(1)   <----------DOF2 ---->ZmHOX2a(2) -------GLK1(1) ----ZmHOX2a(2) ------>GLK1(1) ------ARR14(2) ------ARR11(1) ------AGP1 --------ARR10                                                                 --------->ANAC55(2) ----->ARR14(2)                                                                ----------->GT1 ----->ARR14(3)                                                                <---------ANAC58 ------ARR14(3)                                                                <---------bZIP60(1) ----->ARR11(3)                                                                --------->bZIP60(1) ------ARR11(3)                                                      <---------ARR14(2) -----ARR14(1)                                                       --------->GLK1(2) -----CCA1(2)                                                  --------->ANAC58<---------ANAC58 --->LBD16                                                     --------->ANAC58<---------ANAC46 --LBD16                                           <----------DOF2   --------->ARR14(2) ====HOX2a_HOX2a                          <---------YAB1    --------->LBD16    <---------ANAC55(2) =====HOX2a_HOX2a --------->LBD16   ------>ZmHOX2a(1)     <---------LBD16 <---------AtLEC2       <---   atctcctttgttgctatttccgaacaaagtctcttctccttcttatgcttcttctttgtctccgcatgccaaatctgaatggcgtaactatacccttgct  756800                                                   --------->ZAT18                                                 --------->At4g35610                                                 <---------ZAT2                                                 --------->ZAT2                                                 <---------At4g35610                                              <---------MYB52(1)                                             <-----------HVH21                                            <---------TGA1a                         --------->ZAT18    --------->O2                       --------->ANAC46     <---------O2                       --------->ANAC58     <---------ANAC46                     --------->MYB52(1)     --------->TGA1a                   --------->ANAC58         ==============================================MYC_MYB                   <---------MYB52(2)       ================================bZIP_DOF               ------>NtERF2               <------NtERF2              --------->ETT(2)            ------>NtERF2             ---------->ID1              --------->ANAC46                                      <-----   <---------ZAT2  --------->ANAC58     <---------At4g35610                                    <-----   --------->ZAT2  --------->MYB46(3)   --------->ATERF1(1)               --------->MYB46(3)   ------   --------->At4g35610 --------->ANAC58<---------ATERF1(1)       <----------DOF2         <---------ZAT6   <------NtERF2  ------>NtERF2       <---------DEAR3(1)        <---------DAG2     --------->ATHB12   <---------At4g35610--------->SPL7 ----------->RAV1(2)   <---------ANAC58      <--------P    ------ --------RAV1(2)<------NtERF2      ------>ZmHOX2a(2)       <---------ANAC58      <---------WOX13(1)   caggcagctaagtttgtcgccacgaacggcactgtgatcgtctgcgccgtgagctcaccattcttgccttttctcaacaactggttgattagtgtttcta  756900  Previous    Next  AGI:  At4g01750.1    Description:  RGXT2 (RHAMNOGALACTURONAN XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase. similar to RGXT1 (RHAMNOGALACTURONAN XYLOSYLTRANSFERASE 1), UDP-xylosyltransferase [Arabidopsis thaliana] (TAIR:AT4G01770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39698.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69309.1); contains InterPro domain Reticulon; (InterPro:IPR003388) Range:  from: 756363    to: 758590    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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