Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------TOE1(3)       <--------HAHB4       --------->YAB1       <---------ICU4                                                          <---------ANAC58      <---------YAB1                                                  <---------AHL20(2)      --------->ICU4       <----------DOF2                <---------ANAC58     <---------ANAC58    --------->YAB1   <----------DOF2        <---------ANAC58          --------->AHL20(2)   <---------YAB1   <------------------------ANAC81       <---------ANAC58     <---------ANAC46 ---------DOF2<---------TOE2(3)             <---------ANAC58     <------ZmHOX2a(1)<-------TEIL --------DAG2---------->DOF2       --------->ARR11(3)     <---------ANAC46 <-----------GT1    <------   gctttataatcattttaaagtttctttttcttttatagctcttgtttcttgccatgttttgcttagaggaatttttttatcgcgttcatttcatagcttt  708100                                                                                                   --                                                                                                   ==                                                                                                  <--                                                                                                  ===                                 ------>ZmHOX2a(2)                       --------->RAP2.6(3)     <---                     <---------REM1(1)                                <---------DAG2             <---                    --------->ARR11(3)                                <----------DOF2            ----              <----------DOF2  <---------ARR11(3)                    <---------DAG2              ----          --------->ANAC46 --------->YAB1                          <-----------------AGL1        <---      <-----------HVH21   <---------ZAT6                           <-----------------AG         <---- ---------->DOF2---------->DOF2--------->ARR11(3)                 <-----------GT1         ------->TEIL ----DOF2<---------LBD16  --------->ICU4                       --------------->AtSPL8    <---------CCA1(2)   gtctaaagcttcacggcttaaagatgtagtgatgatctaattctcgattgtctatgcttccatattttttaccttttcggcatgggacaatgtatctagg  708200          <---------ANAC58          <---------ANAC58       --------->bZIP60(1)       <---------bZIP60(1) ---->ZmHOX2a(2)              --------->ZAT6                                                   ------ =======================HOX2a_HOX2a                                             <---------AHL20(2) ----ZmHOX2a(2)              <---------YAB1                                    --------->AHL20(1) =======================HOX2a_HOX2a                                            <---------AHL20(2) ------ARR11(3)              <---------TOE2(3)                                 <---------AHL20(1) ------ARR14(2)             <-----------GT1                    --------->YAB1  --------->AHL20(2) ----->ARR14(2)       --------->TOE2(3)                     --------->ANAC46   <---------ARR11(3) ----->ARR11(3)       --------->TOE1(3)         --------->ANAC46               --------->ARR11(3) --------ARR10   ------>ZmHOX2a(1)              --------->ANAC58  --------->AHL20(2)        --------- --ZmHOX2a(1)   --------->TOE2(3)               --------->ANAC58  <---------AHL20(2)        ---------   atcttactgatgtcgtttcctaaaccttattaacattacattcttatcacacacaaaaaaacacatcataaattgatgaaatatatttggacaattaaaa  708300       <---------ANAC55(2)       --------->ANAC55(2)                          ----------->GT1       <---------ANAC58                       <---------At4g35610       <---------ANAC55(1)                    <---------HSFC1(2)                                    -       <---------ANAC46                       --------->HSFC1(2)                <---------------AGL15       <---------ANAC58                      --------->ANAC58                  <-----------------AGL3   <-----------HVH21                         --------->ANAC58         <<<<<<<<<<<<<<<<<LFY      ----- --->ZAT6          ----------->RAV1(1)     <------ZmHOX2a(1)          >>>>>>>>>>>>>>>>>LFY      ----- >YAB1<---------LBD16                    <---------TOE2(3)        ---------->DOF2      ----------->GT1 >AHL20(2)    --------->WOX13(1)         <---------TOE1(3)     <----------DOF2 ----------------->AGL1   ctacatgttacgggagcaatccaacaaaacatcacaaatggttaaggaagctactcgtaaaactcctttatagcccaatgggccttatatggtgacaata  708400                         <------NtERF2                        --------->RAP2.6(2)                                                   -------                       ----------------->AGL1                                                 -------                       ----------------->AGL2                                    <---------DEAR3(2)                      <------NtERF2                                    --------->O2           <------                     <---------SPL7  --------->TOE1(2)                 <---------ANAC55(2)    <------                     ------>NtERF2   --------->TOE2(2)                 --------->ANAC58    --------->ETT(2)                     <---------ATERF1(1)                               --------->ANAC46    <---------DEAR3(1)                    --------->ATERF1(2)                                --------->ANAC55(1) --------->DEAR3(1)                    <---------DEAR3(1)                           ------>NtERF2--------->TOE2(2)                    --------->DEAR3(1)                          --------->ARR14(2)     ==============                    <---------RAP2.6(2)            --------->GLK1(2)   --------->ANAC58------>ZmHOX2a(1) --------->DOF2     <---------ATERF1(2)           <---------ARR14(2) <---------ALFIN1  ============== ---->AHL20(2)     --------->ATERF1(1)      <------ZmHOX2a(1)  --------->At4g35610 <---------ARR14(2) ---->YAB1         --------->DEAR3(2)--------->TOE2(3)         <---------At4g35610 --------->ARR14(2)   aaaaaagaataggctaattgggccggccgaaactagaaaccttggaggagcagtttctggttatcggctccccacgtaaacctcggttcctcgtcgacgt  708500    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  <---------ARR14(2)  <---------ARR11(3)  --------->ARR11(3)                           --------->HSFB2a(2)  --------->ARR14(2)                           <---------HSFB2a(2) -->TGA1a                                    --------->HSFB2a(2)         --------------->AGL15 -->O2           --------->ANAC46           *TSS    --------->HSFB2a(1)  <---------------AGL15 ---O2           --------->ANAC58        <----------DOF2                <-----------------AG ---TGA1a        --------->ANAC58     <-----------GT1              ------>MYB46(1)                  - ==========HOX2a_HOX2a            --------->AHL20(2)<---------HSFB2a(1) <-----------------AGL1     <- =========HOX2a_HOX2a        <---------ALFIN1<---------HSFB2a(2)   ------>MYB83              --------   ctccgatcttcgtggtctaacgcaaaaacacacacattatatactttctcgagaaaattcttcaaaaccaaattgacaaaaatggaaaacaaaaaaaaag  708600                                            <---------ANAC46                                     <-------MYC3                                     <---------LBD16                                     ------->PIF5                                     <-------PIF5                                     ------->MYC2                    <---------DAG2<<<<<<<<<WRKY18                                     ------->MYC3                    <----------DOF2        <---------ARR14(2)           <-------MYC2                 <---------ARR11(3)            <----  ----------->GT1                   --------->ANAC58              --------->ARR11(3)            <---- --------->DOF2                     --------->ANAC46   <---------ANAC58            <---------WRKY12 -----ZmHOX2a(1)        ----------->GT1 <------NtERF2  <---------ANAC46          <-----------HVH21 -->DOF2--------->ARR14(2)          --------->ANAC58   <---------ANAC58        <-------TEIL     <----   aggaaagtcaaatccacgattaagaagagtaactttgcacgcggcttcgtgatgagttcgtggagcaagagctttaccaggctcgtcaatggtgtttcgc  708700                                                                   --------->YAB1                                                               ----------->GT1                      -                                                              ----------->GT1                       -                                                             <---------TOE1(2)                      -                        <---------WRKY38(1)                  <---------TOE1(3)                      -                      <-----------HVH21                      <---------TOE2(2)                      <           <---------ARR11(3)                            --------->HSFB2a(2)                       --           >>>>>>>>>GATA-2                               <---------HSFB2a(2)                       <-           --------->ARR11(3)                           ------>ZmHOX2a(2)                          --           >>>>>>>>>GATA-1<---------At4g35610          <------ZmHOX2a(2)                          <--           >>>>>>>>>GATA-4<---------LBD16             --------->ARR11(3)                       <-----           >>>>>>>>>GATA-3--------->At4g35610         <---------ARR14(3)                       <-----           --------->AGP1--------->MYB52(1)           --------->ARR14(2)                      <------          --------->GLK1(1) --------->LBD16           --------->ARR14(3)                     <-------     ---------->DOF2 --------->WOX13(1)               <---------ARR11(3)                   <--------- -----ANAC58     --------->YAB1                       <---------ARR14(2)        --------->LBD16<----- -----ANAC46 ------>ZmHOX2a(2)        ---------->DOF2<---------GLK1(1) <-----------------------TaNAC69(2) -----ANAC58<------ZmHOX2a(2)       ---------->DOF2  --------->GLK1(1)<-----------GT1 ---------->DOF2   ttgtagcgaaagagatctataatcagtcaccggagttacaaagagcgagaaatggagatctcgaaggtttaataacgtcttcagggaaaaaagctttggt  708800        ------>MYB46(1)      ------->GAMYB      --------->DEAR4(1)      --------->DEAR3(1)     <------NtERF2     --------->DEAR3(2)    ------>NtERF2    <---------ATERF1(1)   --------->DEAR3(1)   <---------ALFIN1  <---------ABI4(2)  <------NtERF2  --------->MYB46(3)  --------->ATERF1(1)  --------->ERF1 <---------RAP2.6(3) <---------ATERF1(1) ------>NtERF2                        <---------HSFB2a(2) -------->DEAR3(1)                    --------->HSFB2a(2) -------->RAP2.6(2)              --------->HSFB2a(1) -------->ANAC46                 --------->HSFC1(2) -------->ATERF1(2)              <---------At4g35610                      <---------MYB52(1) ---------ATERF1(2)              <---------HSFB2a(1)                     <-------GAMYB ------->ATERF1(1)               <---------HSFC1(2)                      --------------------->WRI1 --------RAP2.6(2)               <---------ZAT2                       ------>MYB83 ------->RAP2.3(1)               --------->At4g35610                  ------>MYB46(1) -------ATERF1(1)           --------->HSFB2a(2)                    --------->HSFC1(2) --GAMYB------>MYB83        --------->LBD16                        <---------HSFC1(2) ----ANAC58                 <---------HSFB2a(2)                    <---------HSFB2a(1) ---MYB46(3)               --------->HSFB2a(2)                     --------->HSFB2a(1)              < --AtMYB61                 <---------LBD16                    <---------TOE2(3)                     - -DOF2--------->DREB2C(2) <---------LBD16                     --------->ANAC46               -------- ----ANAC58           -------->P----------->ARR10  <-------TEIL <------ZmHOX2a(1)           <------ZmHOX2a(1)   tgccgccaccgacttagtcggacttacctccgggaagcttcgcgaactctcgattcgtcgatctaaggaaccttccgttgtttatttcgacgaaggagat  708900                                            --------->AtMYB61                                            <---------MYB46(2)                                            --------->MYB46(3)                                            <---------MYB111(1)                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                --------->ARR14(2)                                --------->AGP1------>MYB46(1)             <------NtERF2      <---------ARR11(3)      <---------DOF5.7(2)       --------->ARR11(3)      --------->MYB52(1)        <---------ARR14(2)   =====================================HOX2a_HOX2a------>MYB83   <------ZmHOX2a(1)     <---------TOE2(3) --------->ANAC46   --------->YAB1    ----------->RAV1(2)   --------->ANAC58 <---------TOE2(3) --------->ANAC58        --------->ANAC58                    ------>ZmHOX2a(1) ---------ICU4     --------->ANAC58      --------->ZAT6                   --------->HSFB2a(1) -------->YAB1--------->ANAC46  <---------AGP1------>MYB83      <---------MYB52(1) --->GT1   <---------DEAR3(1) ----------->ARR10    ------>MYB46(1)      ---------->DOF2  ------->TEIL   aataaggataacgtcgtcgcaacgcctgaggttagatctgttaacaccaaacctagcgagaaaatcgttgattcgaaagtcctgagaaatgaatttagcg  709000  Previous    Next  AGI:  At4g01660.1    Description:  ABC1At (ARABIDOPSIS THALIANA ABC TRANSPORTER 1). similar to ATATH13 (ABC2 homolog 13) [Arabidopsis thaliana] (TAIR:AT5G64940.2); similar to ATATH13 (ABC2 homolog 13) [Arabidopsis thaliana] (TAIR:AT5G64940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40210.1); contains InterPro domain ABC-1 (InterPro:IPR004147); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 708544    to: 711256    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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