Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <------MYB46(1)                            --------->GLK1(2)                            --------->ARR14(2)                            <---------ARR14(2)  --------->LBD16                           ------>MYB46(1)     <---------ANAC46                         --------->AtMYB61    ------>NtERF2                         <---------MYB111(1)  --------->At4g35610                      --------->DEAR3(1)      <---------At4g35610                      --------->AtMYB61    <---------At4g35610                      <---------ALFIN1    <---------bZIP60(2)           ----------->HVH21<-----------ARR10 <---------LBD16 -------->REM1(2)    --------->MYB46(3)----------->HVH21                             --------->ANAC58 ------>LBD16    ------>MYB83        <---------DEAR3(2)                             ------->TEIL ------ANAC46    ------>MYB46(1)     <------MYB83                                <---------MYB52(2) -------------------TaNAC69(2)      <---------DEAR3(1)                           --------->ANAC58 -->ANAC58 --------->WRKY38(1)      <---------DREB2C(2)            --------->ARR14(2)--------->ANAC58 -->ANAC58--------->At5g28300       <---------MYB46(3)             <---------ARR14(2)--------->ANAC46 ->SPL7   <-----------HVH21------>MYB83----------->TGA1--------->AHL20(2)        --------->ANAC58   cgtgaagaacacggtgacctagcaccaccaaatctgagtcggtgacgctgcggaagaaaaaatagtgagaaacctcgagactcacgaacgctactctcga  532000                                                                            <---------YAB1                                                                       <---------ICU4                         --------->ARR11(3)                        <---------AHL20(2)              <---------ANAC58                                 --------->AHL20(2)               <----              <---------ANAC58                                 <---------AHL20(2)               -----             <---------ZAT18      <---------ZAT6              --------->AHL20(2)   --------->MYB46(3)         <---------ICU4  --------------->AtSPL8             --------->TOE2(3)    <---------WRKY18(1)     <---------AHL20(2)  <---------------AtSPL8           --------->ICU4<------------CBF  -----------  ----------->GT1    ---------->DOF2                --------->MYB59--------->AHL20(2)  <---------ATHB12   gagtgagttaattagtgcatgcgaaaagatgtactagtattactaaaaacgagttaagtcaacattaatttaaacattgtgtttgaccactgatcaatag  532100                                                                                         ------->MYC3                                                                                         <-------PIF4                                                                                         <-------MYC3                                                                                         <-------PIF5                                                                                         <-------MYC2                                                                                         ------->PIF4                                                                                         <-------MYC4                                                                                         ------->MYC4                                                                                        --------->ANAC46                                                                                  <---------ANAC46                                                                               ----------->HVH21                                                                              ------->MYC3                                                                              <-------MYC3                                                                             --------->ANAC55(2)                                                                             --------->O2------->PIF5                                                                             --------->ANAC58                                                                             --------->TGA1a                                                            <XXXXXXXXXXXXXXXXXXXXMIR774B--------->ANAC55(2)                                                          <---------MYB46(3) <---------TGA1a                                                 <<<<<<<<<<<<<<<<<LFY        --------->bZIP60(1)                                                 >>>>>>>>>>>>>>>>>LFY        <---------O2------->MYC2                                                --------->ANAC58             --------->ANAC46                                  <---------MYB52(1)     <--------P          <---------ANAC55(2)                 ----------------->AGL1         --------->ANAC46             --------->ANAC58 -----At4g35610 <-----------------AG            --------->ANAC58      <-----------GT1 <------------OsbHLH66 ---->At4g35610 ------->TEIL      --------->ALFIN1       ==============================MYC_MYB ->CBF  <----------DOF2 ----------->GT1 <---------MYB59<---------MYB46(3)  <-------------DYT1     ---   ctgatttgggctttaatggacctatagggtaaaaacgttgggcctaatacaagccactggttgtttatgtttttatctcacgtgacttacacgtgctatc  532200                                               <------NtERF2                                              ------>NtERF2                                             --------->ANAC46      --------->ARR14(2)                     --------->ANAC58      <---------GLK1(2)                      --------->ANAC58      <---------ARR14(2)                    <---------LBD16      --------->ARR11(3)                    --------->LBD16                            --------->HSFB2a(2)      <---------ARR11(3)                   --------->ANAC46                          --------->HSFB2a(2)      <-----------ARR10                   <---------LBD16                    <---------YAB1  --------->LBD16                  <---------DAG2  <-------MYC3           <----------DOF2  <---------LBD16    <------------CBF   <-----------GT1                  <---------DAG2<---------HSFB2a(2) --->ZmHOX2a(1)    <---------YAB1  <----------DOF2 ------->MYC3       <-----------GT1<---------HSFB2a(2)   cttccccagattttcgcgcttaccattgaaatttcaactttttatccgcgccatgtgtttgctctctgatatttgccttttgattttctcgagaagaaaa  532300                                                                         --------->ANAC58                                                                         --------->ANAC58                                    <------NtERF2                   <------NtERF2                                   --------->LBD16                 --------->LBD16                                  <---------ANAC46                 ------>NtERF2                             <------------CBF                      <---------MYB46(3)                            <---------MYB46(3)                    <---------DEAR3(1)                <                            --------->ATHB12                      --------->ALFIN1                 --                        <---------DREB2C(2)                      <------NtERF2                     <-                        <---------MYB46(3)                       --------->ATERF1(1)               --              <---------At4g35610 --------->ETT(1)               ------>NtERF2                     --              --------->At4g35610<---------LBD16               <---------DEAR3(1)                  <-            <---------ARR14(2)<---------WOX13(1)              <---------LBD16                      <-         <---------ANAC46<------MYB46(1)                   ---------->DOF2                         <-         --------->ETT(1)<------MYB83                   <--------------OsCBT                     ----      --------->ALFIN1  <---------DEAR3(1)           <------NtERF2<---------ANAC46        --------->At4g35610   tggtgactgtgtcggaaactgactagtcggtgattgccggagagatagctatggccgaagaaaacgcggcggggaatgcaatttgttcaatctgctacga  532400            <---------MYB46(3)            --------->MYB55(2)           <---------AtMYB61           --------->ALFIN1          <---------MYB52(1) ------>ZmHOX2a(2)                 <-----------------AGL1               --------->SPL7 ------ZmHOX2a(2)             --------->WOX13(1)                    <---------------AtSPL8 ------->ARR11(3)           <---------ATHB12                        <---------------AtSPL3 --------ARR14(3)          --------->ANAC58                      <---------MYB46(3) ------->ARR14(3)          --------->ANAC58                   <----------DOF2 ------->ARR14(2)   --------->ARR14(2)                      ------->TEIL--------->RAP2.6(3) --------AGP1<-------GAMYB--------->WOX13(1)             --------->ANAC58 ----------->GT1 --------ARR14(2)   <---------ARR14(2)                   --------->ANAC58--------->ANAC58 --------ARR11(3)   --------->GLK1(2)                    --------->ANAC46--------->ANAC58 ------->ARR10     <---------GLK1(2)                <----------DOF2<--------P                <-------   agatcttaaaccggtggttgagaatctgcaatcaatctccgcttgtggccatgtctttcacgaactttggttagtacggcaaaatcaattctctaatgaa  532500                                                      --------->TOE2(3)                                                   --------->GLK1(1)                                                  --------->ARR14(2)                             ----                                               --------->HSFB2a(2)                               ----                <---------AHL20(2)             <---------HSFB2a(2)                              -----               --------->AHL20(2)             <---------LBD16                                  ------          --------->LBD16                   <----------DOF2                                    ------ --ATHB12--------->ANAC46        <---------AHL20(2)<---------GLK1(1) <---------ATHB12--------->LBD16   gtttattatctccgaaattttatagatttatgtgtttaatcgatttctttcggaaaccctagtttgcagcaatggtttgagtattgcccgagtacgaaca  532600                                               <---------ETT(2)                                               --------->ETT(2)                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       --------->ARR14(2)                                       --------->ARR11(3)                                       <---------ARR14(2)                                  ---------->DOF2  <----------DOF2                           --------->ZAT14    ---------->ID1 ----->ANAC58              <---------ZAT14   --------->REM1(2)      --------->LBD16 ----->ANAC58              <---------ZAT18<---------ANAC58         --------->HSFB2a(2)             -- ---->TOE1(2)              --------->ZAT18<---------ANAC58         <---------HSFB2a(2)      <-------- ---->DOF2         --------->At4g35610 <---------ARR11(3)         <---------LBD16<---------ARR14(2)<- --->MYB46(3)      <---------At4g35610<------ZmHOX2a(1) <----------DOF2          --------->ARR14(2)<-   agcgaaattgtccgatttgtaagcagaagtgctctctaaaggatccttgtcgactttactttcagtcttctgggaatcaaaccgattcgattgcctcgga  532700                        --------->LBD16                      =======================HOX2a_HOX2a                     ========================HOX2a_HOX2a                     <------ZmHOX2a(2)                    --------->ARR14(3)                    --------->ARR11(1)                    --------->ARR14(2)                    <---------ARR11(3)                            <-------TEIL                    --------->ARR11(3)                         <------MYB83    <-------GAMYB   <---------ARR14(3)               <----------DOF2   --------->MYB111(2)------>ZmHOX2a(2)             <---------ANAC58                  <---------HSFB2a(2)   --------->MYB111(1)<---------LBD16               <---------ANAC58   <-----------ARR10   <---------MYB46(3)--------->ARR14(1)             <---------ANAC46   --------->GLK1(2)   --------->MYB55(2)--------->CCA1(2)           <---------RAP2.6(2)   <---------ARR11(3)          -- ------->DAG2       <---------ARR14(2)          <---------At4g35610   <---------GLK1(2)    <------NtERF2 -LBD16            <---------HSFB2a(1)       ---------->DOF2   <------MYB46(1)     <---------ARR14(2) --------TOE2(3)   <---------GLK1(1)        ----------->HVH21 <---------------AtSPL8  --------->HSFB2a(2) --------TOE1(3)  ----------->ARR10   <------ZmHOX2a(1)       <---------------AtSPL3 <---------LBD16-   taaggttgttggaatcgaagaagatccggttttgttgagaggagaagtgaagcggcttgaagggaaggtacagaatcttacttcggctctggaggcgaag  532800                                                                                  --------->ANAC55(2)                                                                                  <---------ANAC55(2)                          ----------->GT1                 ----------->GT1   <---------TOE2(3)                         <---------TOE2(3)       --------->ATHB12           <---------TOE1(3)                         <---------TOE1(3)  <---------ANAC46                --------->DAG2 -------->DOF2           --------->DAG2     <---------ANAC58              --------->CCA1(2) <XXXXXXXX -------->DAG2       --------->YAB1         <---------ANAC58         --------->CCA1(2)   <---------AHL20(2)   aaaaaggagaatgttgaagtctctgataaggttaattttgttcatttcgtttgattagaatggtttataagataagataaggttatgtgatttttttttt  532900  Previous    Next  AGI:  At4g01270.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01245.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80879.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 532351    to: 534984    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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