Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->ANAC58                                                         --------->ANAC58                                                       ------>ZmHOX2a(2)                                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   <xxxxxxxxxxxxxxxxsmallRNA(i)                                                   ------>ZmHOX2a(1)                                               --------->ARR11(3)                                       --------->DAG2  ========================HOX2a_HOX2a                                      ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(i)  --------->AtMYB61<                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <---------ALFIN1 <        <------NtERF2                <---------ATHB12<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         --       ----------->GT1          xxxxxxxxxxxxxxxx>smallRNA(s)                    <---------ALFIN1   --       --------->RAP2.6(2)      --------->ANAC58 ----------------->AGL1 ------>ZmHOX2a(1)          <-  ---------->DOF2         --------->HSFB2a(2)----------->ARR10   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----->ZmHOX2a(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---MYB46(3) ---------->DOF2    --------->ANAC58xxxxxxxxxxxxxxxx>smallRNA(s)   --------->MYB46(3) ---   tcctgaaggccgaaaaaaagagagacttctgggctcgcaataaagctaaggtcctgatcgagcaactagtcgtcctatctatccacctctccaaacacaa  414000                                                    --------->CCA1(2)                                                   <---------ARR14(2)                                                   --------->ARR11(3)                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                           <---------------AtSPL8                                         -------->ATHB1                    --------->At5g28300                --------->CCA1(2)        --------->ATHB51                  <---------MYB52(1)         --------->ZAT14                 --------->ATHB12                 --------->LBD16         <---------ZAT14                 <---------ICU4                  --------->LBD16      <---------At5g28300               --------->AHL20(2)              <---------LBD16     <-----------GT1                    <---------AHL20(2)       --------->ZAT14 ---------AHL20(2)                      <---------ATHB51        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---------YAB1 --------->ARR11(3)       --------->ICU4         <---------ZAT14 ------->AHL20(1)                    --------->AHL20(2)        --------->ZAT14 ------->AHL20(2)                   --------->AHL20(2)   >>>>>>>>>>>>>>>>>LFY --------AHL20(1)      ----------->RAV1(1) <---------------AtSPL3<---------ZAT14      <---------WRKY18(1) ------>YAB1   <---------ARR14(2)   <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   atataattcactgtacagatatagaccacagtacatatataaattattgtacagatatagaccactgtacagaccccggtaatttgtttgaccaaaacaa  414100                                                                                         ------------                                                                                         <-----------                                                                                     --------->YAB1                                                                                 --------->ICU4                                                                                <---------AHL20(1)                                                                               --------->YAB1                                                                             <---------AHL20(1)                                                                             --------->AHL20(1)                                             ----------->ARR10               --------->AHL20(2)                                         <---------ZAT2                      <---------AHL20(2)                                         <---------At4g35610            <---------AHL20(1)                  --------->TOE2(3)      --------->ZAT2                 --------->AHL20(1)         --------->ARR14(2)              --------->At4g35610            --------->AHL20(2)         <---------ARR14(2)     <---------ANAC46                 --------->TOE2(3) <-----------TBP         --------->ZAT14      <---------ANAC46 <---------GLK1(2) <---------MYB59<---------AHL20(2)   --------->MYB52(1)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   --------->TOE1(3)<---------ICU4   aaaaaaaacagaatactcttcattaactacttctgtgtgtatgagctgagattatcaaattttgtaacctaaaatataatataatatttataatgtacaa  414200                                                                               <---------ANAC46                                                                               --------->ALFIN1                                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                        <------------CBF                                                                       --------->ATHB51                               --------->AHL20(2)                      <---------ICU4                               <---------AHL20(2)                     --------->ICU4       <---------MYB52(1)                               <---------AHL20(1)                     <---------YAB1xxxxxxxxxxxxxxxxx                           <XXXXXXXXXXXXXXXXXXXXMIR1888             --------->YAB1  xxxxxxxxxxxxxxxxx                         --------->TOE2(3)                          <---------ICU4<---------ANAC58                   --------->AHL20(2)                              --------->ICU4 <---------ANAC58    <------------CBF<---------AHL20(2)                     ----------->GT1   <-----------RAV1(1) <----------DOF2   --------->AHL20(1)           --------->ANAC58   <---------ATHB12<--------P<------- <---------DAG2    <---------AHL20(2)           --------->ANAC58--------->ICU4<xxxxxxxxxxxxxxxxsmallRNA(i) --->AtSPL8        <---------AHL20(1)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <-------GAMYB ----AtSPL8   ------------>CBF --------->AHL20(1)     <-----------HVH21--------->ATHB12 xxxxxxxxxxxxx   ctactttattgtttctaacaatttatttcttaataaattttagttttggcaagaaatgtcagagtaaaaatcattattgctgtgggttgctctgttattg  414300           --------->ZAT14           --------->LBD16          --------->ANAC46          ------->GAMYB         --------->MYB46(3)       --------->MYB52(1)       <---------ARR14(2)       --------->ARR14(2)      ----------->HVH21    --------->RAP2.6(2)                    <----------ID1    --------->ANAC46           <------ZmHOX2a(1) ---------->DOF2 xxxxxx>smallRNA(fl3)    <---------ANAC58  ----------->GT1                            ----------->GT1 xxxxxx>smallRNA(l2)<----------DOF2 ---------->DOF2                               <---------TOE2(3) -----CBF<xxxxxxxxxxxxxxxxsmallRNA(i)   ---------->DOF2                         ---------->DOF2<----- xxxxxxxxxx>smallRNA(si3)<---------ANAC58 ----------->GT1                    --------->YAB1    ------   gtttagccgtaaccgcagtctgcttttacttgaggaataaaagaaaggaaaaaaagagacatgaaggtggattttttagtcataaaggttgaaaaactat  414400                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                    ----------->GT1                                                                                    --------->AtLEC2                                                                                  <-----------RAV1(2)                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                 <------ZmHOX2a(2)                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                         <---------ANAC58                            <---------AHL20(2)             <---------DAG2<---------ANAC58                        <---------AHL20(2)                 <----------DOF2<----------DOF2           <                       <---------AHL20(2)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)        - <----------DOF2  <---------AHL20(2)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ARR14(2) ----ARR11(3) <---------AHL20(2)                   ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --->ARR11(3)<---------AHL20(2)            <---------AHL20(2)      <---------AHL20(2)    <---------ARR14(2)   cttctttgagagttttttatttttttttatttttttttgagagttttaattttaaaagacactttttgttttattgctttgggatcaggcaaatatgtcg  414500                        <---------ICU4                        --------->ATHB12                        -------->ATHB1            <---------TOE2(3)           ---------->DOF2 <------ZmHOX2a(2)      --------->ATHB51 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxx>smallRNA(se3)    <---------YAB1 xx>smallRNA(le3)      --------->ICU4                                                             <-- xsmallRNA(si3)        <---------ATHB51                                                    <---------REM1(1) xsmallRNA(le3)  <-------TEIL         <----------DOF2                              ------->GAMYB ---- ---------ARR11(3)     <---------AHL20(2)                     <---------ICU4------>ZmHOX2a(1) <------ -------->ARR11(3)     --------->AHL20(1)                   <---------MYB52(2)    --------->MYB46(3)<   aagatcagaagattaaagatgcaaaattattgcaacttgactttgataccataagattagcaactaatgacttctctccttacaaccatcttggtgaagg  414600                                 --------->MYB52(1)                                 <-----------GT1                             --------->ATHB12         ----------->GT1   <---------WOX13(1)       <---------ZAT18   --------->ATHB12       --------->ZAT14   <--------ATHB1       <---------ZAT14  --------->ICU4       --------->ABI4(2)<---------YAB1 -------MYB46(3)       <---------WOX13(1)  <-----------GT1 ----->ALFIN1    --------->DAG2<---------WOX13(1)                                                ---- ---AtMYB61      <---------TOE2(3)      <---------ICU4              ---------->DOF2    ------->MYC3 ---------ARR14(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------MYB52(2)   <-------MYC3 -   tggtttcggtgcagtttataaggtgaatgattgattaactgatttttacttataccataagattagcaactaaagacttctctctaacatgtgtttcaat  414700                     <---------LBD16                     --------->LBD16                    <---------LBD16                                                                <-                    <---------ANAC46            <---------YAB1                                     <-          <------NtERF2                     <---------GLK1(2)                                     <--        <---------ANAC58                  --------->ICU4     <------ZmHOX2a(1)                 xxxxxx        <---------ANAC58         --------->At4g35610      <---------ICU4                      ------- ----->YAB1  ------>ZmHOX2a(1)   <---------At4g35610<---------ATHB12                         <------- -------->ANAC46   <---------LBD16 ----------->GT1--------->WOX13(1)                <---------DOF5.7(2)   aaacaccagggcgtccttgattccggggaagagatagctgtgaaaagattgtcaatgaaatcaggacaaggagacaatgagttcgtaaacgaagtctcat  414800      <---------ARR14(2)      --------->ARR14(2)   <---------ANAC58   <---------ANAC58 --------ANAC58                                                                                ------ --------ANAC58                                                                                ------ -------MYB46(3)                     <---------TOE2(3)                                         ------ xxxxxxxxxx>smallRNA(i)              <---------TOE1(3)                             <----------DOF2 -->ATHB12     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                             --------->ARR11(3) --YAB1--------->HSFC1(2)        <----------DOF2  ---------->DOF2               <---------ARR11(3)   tggttgcgaaacttcaacatcgtaatcttgttaggcttttaggtttctgttttaaaggagaagaacgacttctcatctatgagttctttaagaacacaag  414900  Previous    Next  AGI:  At4g00960.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G00970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22275.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 414361    to: 416180    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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