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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                 <--
                                                                                                 ---
                                                                                    --------->YAB1
                                                                                   <------ZmHOX2a(2)
                                                                                   =================
                                                                        --------->ZAT14--------->ATHB12
                                                                        <---------ZAT14<---------ICU4
                                                                        --------->REM1(2)    <------
                                                                <------ZmHOX2a(1) --------->ARR11(3)
         --------->YAB1                                         ==========================HOX2a_HOX2a
        <---------YAB1                                  ------->GAMYB --------->LBD16 --------->ICU4
<---------AHL20(2)             <----------DOF2        --------->At4g35610         <---------ARR11(3)
------AHL20(2)   --------->GLK1(2)                    <---------At4g35610        <------ZmHOX2a(1)
-GT1    --------->ICU4 <---------YAB1             --------->ANAC46   <---------ANAC46 <---------YAB1
 
tattttaagttatgatgaagaatatgaagatagactttgtttaccgatggtagaggcaactgaacaaggactccgtgaacagaaggatcatcattgaatc  256200
                                                                                                  <-
                                                                                                  --
                                                                                                  ==
                                                                                                  --
                                                                                                  --
                                                                                       <---------ANAC58
                                                                                       <---------ANAC58
                                                                                     <-----------GT1
                                                                                     <---------AHL20(2)
  <---------ANAC55(2)                                                     <-----------GT1         --
  --------->ANAC55(2)                --------->At4g35610               --------->ARR14(2)         --
 <-------TEIL                        <---------At4g35610               <---------ARR14(2)         <-
-------YAB1              <---------At4g35610                           <---------GLK1(2)          <-
--->ZmHOX2a(1)           --------->At4g35610               --------->AHL20(2) --------->ANAC46    --
====HOX2a_HOX2a       <---------At4g35610                  <---------AHL20(2) --------->ANAC58    --
---ARR14(2) <---------ALFIN1  ------->TEIL    ------->TEIL--------->AHL20(2)  --------->ANAC58 -----
 
ctgatacatatttcaacacctcttcttctgatgaatcttcagctagacgaacttggactgatttaattccgacggattcacaagctattttcttgttcct  256300
           --------->GLK1(1)
          --------->ARR14(2)
       <---------ANAC46
      <---------LBD16
     --------->MYB52(1)
>>>>>>>>>NAP
--------O2<---------ARR14(2)
------->TGA1a
================================bZIP_DOF
------->ANAC58
------->O2<---------GLK1(2)                             <---------ALFIN1
------->ANAC58<---------ANAC58                        --------->AtMYB61
------->ANAC46--------------------->WRI1              <---------ALFIN1
--------TGA1a <---------ANAC58                       --------->MYB46(3)
--------ANAC55(2)                                  --------->ARR14(2)
------->ANAC55(1)    <----------DOF2               <---------ARR14(2)
------->ANAC55(2) ---------->ID1                  <------ZmHOX2a(1)       <---------YAB1    <-------
->ZmHOX2a(1)  <---------ANAC46   <---------ICU4<---------LBD16<---------WOX13(1)  <---------HSFC1(2)
 
cacgtaagtagcggattccttgttcttttccaacaaggattactgctaaaccaggaaccacaccgattgattccttcattcttgaaacttcgattttgat  256400
                                                                                  ------>NtERF2
                                                                                 --------->DEAR3(1)
                                               ------------------------>ANAC81  <---------At4g35610
                                             <---------At4g35610                --------->At4g35610
                                             --------->At4g35610               <---------ATERF1(1)
                                           <-----------RAV1(2)               --------->ZAT18    ----
                       <---------DAG2<---------YAB1         <------ZmHOX2a(1)--------->ZAT14    <---
                  <------NtERF2    --------->YAB1         --------->ALFIN1  --------->ALFIN1    <---
--YAB1   <----------DOF2        --------->WOX13(1)<XXXXXXXXXXXXXXXXXXXXMIR847<---------ZAT14--------
 
atcatctctaatctttttggcctcagcctttccatcaattacaatcgcagatggagaagaagaggagcgaatggagagagtgcagcgccaagtagacgca  256500
                                --------->ALFIN1
                               --------->ATERF1(1)
       --------->At4g35610     <------NtERF2        <-------GAMYB                               ----
       <---------At4g35610    <---------MYB46(3)    <<<<<<<<<<AtWER              <---------ANAC46
       <---------ZAT2        <---------DEAR3(1)    <---------MYB46(3)            --------->ALFIN1
     --------->SPL7          <---------ANAC46     <---------ANAC46       ----------->HVH21     <----
    <---------MYB52(1)       <---------ANAC58     <---------ANAC58     --------->ANAC58        -----
----->At4g35610              <---------ANAC58     <---------ANAC58     <---------O2          -------
----GAMYB                    --------->ALFIN1     <---------RAP2.6(2)  --------->ANAC46  <------ZmHOX2a(1)
------At4g35610   ----------->HVH21               <---------TOE2(3)    --------->O2   <------ZmHOX2a(1)
->ANAC46        --------->At4g35610  <------ZmHOX2a(1)                 --------->ANAC58--------->ALFIN1
 
gttgtccgtaagctgaattggctgacgctcgggcgggggaggaaaacaccattgcggttgtataaatggatgagacgcgacgttgtggaggaggagcaat  256600
                                                                                  <--------P
                                                                               <---------TOE2(3)
                                                                             ---------->DOF2    ----
                                                                            <XXXXXXXXXXXXXXXXXXXXMIR2112-3P
                                                                        <---------ANAC46      ------
                                                                      --------->ALFIN1        ------
                                                                    <---------ANAC58          ------
                                                                    <---------ANAC58          <-----
   --------->YAB1                                                  <---------TOE1(3)          <-----
----->YAB1   ------>NtERF2                                         <---------TOE2(3)  --------->CCA1(2)
-----ATHB12 --------->ANAC58                                      <---------DOF5.7(2)<---------ARR11(3)
---->ICU4   --------->ANAC58                 ---------->DOF2    --------->DOF5.7(2)<-------TEIL-----
-->WOX13(1) --------->ANAC46    --------->MYB52(1)  <------------CBF<---------ANAC46 --------->ARR11(3)
 
cagtaaacatcatcgacgccatttgtttactaggcaaacagaagaaaacaaagtagattgtttctaagttaacgtgtgtgtaaaggtagatatagaagat  256700
                                          <---------YAB1
                                        --------->ATHB51
                                        <---------ICU4
                                        <--------HAHB4
                                        --------->ATHB12
                                       <---------YAB1
                                       --------->ICU4
      --------->YAB1                 <--------HAHB4
      --------->TOE1(3)              <---------ICU4
      --------->TOE2(3)              --------->YAB1                   <---------TOE2(3)
------->TEIL                        --------->ICU4           <--------HAHB4
----------->AtSPL8             <---------HSFB2a(2)           <---------ICU4
--->ARR14(2)                   --------->HSFC1(1)           --------->ICU4
--->ARR11(3)                   --------->HSFB2a(2)          <---------YAB1
--->ARR11(1)                   ------>ZmHOX2a(1)          --------->YAB1
----ARR14(2)             --------->ARR11(3)              <---------YAB1               ----------->GT1
----ARR11(3)        <------ZmHOX2a(1)-------->ATHB1    <---------CCA1(2)            <---------ZAT14
---->CCA1(2)    <---------MYB52(1)--------->YAB1     --------->YAB1  --------->MYB52(1)     --------
 
atgtacttatcttaaatccattaggaattatctcctagaatcattattagtttatatcatatcataattatctaacgatttcatgtctgtagtaacaaag  256800
                                                                  --------->TOE1(2)
                                                                  --------->TOE2(2)
                                                           --------->TOE2(3)
                                                          --------->YAB1
                                                         >>>>>>>>>MYB98                    <--------
                                                     --------->TOE2(3)                   ---------->DOF2
                     <-----------GT1                 <----------DOF2               --------->ANAC58
      <---------------------WRI1                  --------->ARR11(3)               --------->ANAC58
-->DOF2    <-------TEIL--------->MYB46(3)         <---------ARR11(3)             ---------->DOF2  --
 
gaagaagactaagatgcaaacaaaaaaccacctatttttgttatccaaaaaaacatctttaacataaaacatatgaataaacgagaaagccataaaggtt  256900
                                                                                 <---------At4g35610
                                                                             ------>ZmHOX2a(2)
                                                                            <------ZmHOX2a(2)
                                                                           --------->ARR11(3)
                                                                           <-----------ARR10     ---
                                                                           <---------AGP1  <--------
             <----------ID1                                                <---------ARR11(3) ------
             ----------->GT1     ------->TEIL                          ---------->DOF2--------->AtLEC2
  --------->ANAC46      --------->ANAC58                              XXXXXXXXXXXXXXXXXXXX>MIR1886.3
-TOE2(3)   ---------->DOF2     <-------TEIL              --------->YAB1=============================
--------->RAV1(1)       --------->ANAC58       ---------->DOF2        <XXXXXXXXXXXXXXXXXXXXMIR1886.2
 
ccaacacaaaaccaaaaagaaaaacataggcaaatgcatctctaaacagataaagactaaacatatttagccatcaaagatctcatctcatgcacaacgt  257000
         --------->bZIP60(2)
         --------->ANAC58
         --------->ANAC46
         <---------O2                 ------->TEIL
         --------->ANAC58        <---------ANAC58
         --------->TGA1a         <---------ANAC46
         ================================================bZIP_DOF
         <---------TGA1a         <---------ANAC58                                  ------>MYB46(1)
         --------->O2            <---------AtLEC2                                <---------MYB46(2)
  ----------->RAV1(2)       --------->ZAT2                                       <---------MYB111(1)
  --------->At4g35610       <---------At4g35610                           <---------LBD16
------>WOX13(1)     --------->At4g35610       <----------DOF2            XXXXXXXXXXXXXXXXXXXX>MIR4227
-ALFIN1<---------ALFIN1  <---------At4g35610 <---------DAG2      ------>ZmHOX2a(1) ------>MYB83
--->TOE2(3)         <---------At4g35610   <-----------GT1  ------>ZmHOX2a(1) <---------MYB52(1)<<<<<
===================bZIP_DOF --------->At4g35610  <------------------------ANAC81 <---------MYB59
 
caatcttctgccacgtcgttttgagctcatcagcttgcatggacttcaccttttcttctatcctcttcctcttcttcaccggtaccaaactccaattctt  257100
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AGI:  At4g00600.1   
Description:  tetrahydrofolate dehydrogenase/cyclohydrolase, putative. similar to tetrahydrofolate dehydrogenase/cyclohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G00620.1); similar to Tetrahydrofolate dehydrogenase/cyclohydrolase [Medicago truncatula] (GB:ABD28438.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Tetrahydrofolate dehydrogenase/cyclohydrolase; (InterPro:IPR000672)
Range:  from: 255320    to: 256610    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g00610.1   
Description:  DNA-binding storekeeper protein-related. similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT1G44810.1); similar to unknown [Populus trichocarpa] (GB:ABK93310.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592)
Range:  from: 256957    to: 257943    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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