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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                              ------
                                                                                              ------
                    --------->SPL7   --------->ANAC46               --------->ETT(2)      --------->ANAC58
          --------->ANAC58        --------->ZAT14          --------->ZAT14                --------->ANAC58
        --------->MYB46(3)  --------->ANAC58               <---------ZAT14                --------->ANAC46
      <---------HSFB2a(2)   --------->ANAC58             --------->ANAC46             --------->ANAC58
      --------->HSFB2a(2)------->GAMYB                 --------->ANAC58         --------->TOE2(2)
-------ICU4--------->MYB46(3)     <---------ZAT14      --------->ANAC58         --------->TOE1(2)
-------GT1--------->ANAC58  --------->ANAC46    <-------TEIL      --------->ARR14(2)  --------->ANAC58
-----TaNAC69(2)     <-------TEIL  <---------ZAT18   <------ZmHOX2a(1)         --------->GLK1(2)
 
acatttcttccacaaccaatgggtacaacccaagcagtacacacattcaagtacaggaacacaacacagtatcgacatgagaacctatgaagcaagcaag  227000
                                                       --------->ANAC58
                                      ----------->RAV1(1)
    <-------GAMYB              --------->ZAT14         --------->ANAC46
   <-----------RAV1(1)       --------------->AtSPL8    --------->ANAC58
 ------>ZmHOX2a(1)         ------>ZmHOX2a(2)      ----------->HVH21
 =================================HOX2a_HOX2a   ------>MYB83              <------ZmHOX2a(2) --------
--->ANAC58               --------->ARR14(2)     ------>MYB46(1)       --------->ALFIN1   --------->YAB1
--->ANAC58               <---------ARR14(2)   --------->MYB46(3)    --------->ALFIN1   <---------TOE2(3)
 
catcctctgttgaattttctggcgatgggatcggagtactccaccagaacccactgacacgagattagtcagtgtggatcaagaggctctaagaataaag  227100
                                                               --------->MYB46(3)
                                                               <---------MYB111(1)
                                                              ------>MYB83
                                                              ------>MYB46(1)
                                                            --------->AtMYB61
                                                            <---------MYB55(2)
                                                            <---------MYB111(1)
                                                        --------->MYB46(3)
                                                      --------->AtMYB61
      <---------ICU4                                 --------->MYB46(3)
      --------->YAB1      <---------ANAC58         --------->ARR14(2)
     <---------YAB1       <---------ANAC58      --------->ANAC46        --------->YAB1
   --------->YAB1--------->ETT(1)       --------->CCA1(2)   <---------MYB111(2)                   <-
  --------->KAN4(1)  <------ZmHOX2a(2) <---------ARR14(2)   --------->MYB46(3) ---------->DOF2  ----
 <---------KAN4(2)<---------DEAR3(2)   --------->ARR14(2)<---------ALFIN1  --------->AHL20(2)<------
-->DOF2        <-----------HVH21       <---------ARR11(3)--------->AtMYB61--------->AHL20(2)<-------
 
acagaataatcataagctggtcggatcaagcttgtgttccaagatttgtgtccgaaaccaccaccaactactctaaaataaaaaaagaagaatttttaac  227200
                  <------NtERF2
                  <----------CDC5
      --------->GLK1(1)                                                              --------->WOX13(1)
 <---------ANAC55(2)                                                               --------->WRKY18(1)
 --------->ANAC55(2)          --------->ANAC58                        --------->ANAC46  --------->TOE2(3)
--------ATHB12   <---------At4g35610                                  --------->ANAC58  --------->YAB1
----->WOX13(1)   --------->At4g35610                                  --------->ANAC58 --------->MYB46(3)
-----GT1     <-----------RAV1(1)                                     <---------------------WRI1   --
----GT1   <----------DOF2     --------->ANAC58                     --------->TOE2(2)<---------WRKY12
 
aatcaagtgatttcttttggcgctgaagaagacacgaattagagagagagaagacaagtggaatttgttatctacgaaatgttcaagtcaaccatagttc  227300
   --------->ANAC58                                                                            *TSS-
   --------->ANAC58                 <-----------ARR10                 --------->GLK1(2)        -----
   --------->ANAC46     <---------ANAC46            <---------YAB1  <---------HSFB2a(1)       <-----
  <---------------------WRI1        --------->GLK1(2)     <---------GLK1(2)         ------>ZmHOX2a(1)
-------->DOF2---------->DOF2    --------->YAB1 --------->ANAC46     --------->HSFB2a(1)     --------
 
gtaaagacgaaacaatgaaagaaacttgtgggcaagaagaatctactcaccagtcaccatagatgctcgaaagattccattagcatcctcgagactagcg  227400
                                                                        --------->At4g35610
                                                   <-----------HVH21    <---------ZAT2
                                                 <---------DEAR3(2)     --------->ZAT2
                                              <-----------HVH21     ------>ZmHOX2a(2)
                                            <---------DEAR3(2)    <---------AGP1
                                            <---------MYB46(3)    <-----------ARR10
                                         <-----------HVH21        <---------ARR14(2)
                                 <---------ZAT2  <---------MYB46(3)<------ZmHOX2a(2)
                                 <---------At4g35610              --------->ARR14(2)
                                 --------->At4g35610           --------->ETT(1)
       ------------>CBF          --------->ZAT2 --------->ETT(1) <---------CCA1(2)
    <---------ANAC58       <---------LBD16 --------->ETT(1)  <-----------HVH21
    <---------ANAC46  <---------ANAC58 <---------MYB46(3)  <---------DEAR3(2)
    <---------ANAC58  <---------ANAC58 <---------DEAR3(2)  <---------MYB46(3)  <---------ZAT14
   <-----------------------TaNAC69(2) <---------ANAC58    --------->ETT(1)     --------->ZAT14
--------->DOF2    <---------HSFB2a(1) --------->ETT(1)  <-----------HVH21   <---------ANAC46
---->LBD16        --------->HSFB2a(1) <---------ANAC46<---------MYB46(3)--------->ZAT14
----ANAC46        --------->HSFC1(2)  <---------ANAC58<---------DEAR3(2)<---------ZAT14   <---------
->MYB52(1)        <---------HSFC1(2)<-----------HVH21--------->ETT(1)   <---------At4g35610
 
gagaaagacgtgcaatgtagaaatttcgtcttcggaagctgtcgggtcgggtcgggtcgggtcgggtcggatctgtgctgagtgtagaagaaacttttgt  227500
                                                                        <---------ALFIN1
                                                                       --------->At4g35610
                                                                       <---------ZAT14     ---------
                                                                       <---------At4g35610 <--------
                              ------>MYB46(1)                      <-----------HVH21 <---------DEAR3(1)
                              ------>MYB83                   <---------AHL20(1)<---------At4g35610
                  <------ZmHOX2a(1)                          --------->AHL20(2)----------->RAV1(2)
          <---------ANAC46   ----------->RAV1(1)             <---------AHL20(2)--------->At4g35610
-DOF2<------ZmHOX2a(1)   <------ZmHOX2a(1)<----------DOF2   --------->AHL20(2)------->TEIL ---------
 
tttctataggacagcgtattaggatttaggaccaacaaatttgggcttttagctataggcccattaaatttgtcagcactgcatctgagcggtgtccaca  227600
                                                                                             *TSS
                                                                                           ------>NtERF2
                                                                                           <--------
                                                                                          --------->DEAR3(1)
                                                                                          --------->ATERF1(2)
                                                                                          <---------RAP2.6(2)
                                                                                          <---------ATERF1(2)
                                                                                         <---------LBD16
                                                                                         <---------ANAC58
                                                                                         --------->RAP2.6(3)
                                                                                         <---------ANAC58
                                                                                       <-----------GT1
                                                            <---------At4g35610 <---------WOX13(1)
                 --------->ZAT18                            --------->At4g35610<------------CBF
             --------->MYB52(1)                        <------MYB83           --------->ATHB12<-----
    <---------ANAC46                                   <------MYB46(1)        <--------ATHB1<------NtERF2
>ZAT18    --------->ANAC46                            --------->MYB59        --------->ICU4---------
-ZAT14 <---------ARR14(2)    <-----------GT1  <---------AHL20(2)             <---------YAB1---------
>ETT(2)--------->ARR14(2) <---------ICU4     <---------AHL20(2)             <---------WOX13(1)<-----
 
gactctatcgtatacccaagggtactggataattacctcgttgcattttttatttgtttggtcagcatatttttagttgaatgattgaatttgccggcca  227700
                                                --------->ARR11(3)
                          --------->ZAT6        <---------ARR11(3)
                   <---------MYB52(1)          --------->GLK1(1)
                  <-----------HVH21            <---------GLK1(1)
                 --------->DEAR3(1)            <---------CCA1(2)
  --------->ETT(2)<-----------TGA1            <---------MYB52(1)
-RAP2.6(3)    --------->ANAC46      ----------->GT1                              ---------->DOF2
----WRKY38(1) <---------ALFIN1      --------->ANAC55(2)                 --------->LBD16
>LBD16       --------->ZAT14        <---------ANAC55(2)   <----------DOF2<------NtERF2
>ORA47(1)    <---------ZAT14       --------->MYB59 <----------DOF2     --------->DEAR3(1)
----WRKY12   <---------REM1(2)    <-----------RAV1(2)  <-----------GT1<---------LBD16  --------->ARR11(3)
 
acgtttcgacagtctctacaccgtcatgaacactgaatcaggtaattccgatatcttttttctttgttctatcgccggagaaatgaaagagatgttgaac  227800
                                            <---------AtMYB61
                                          <----------DOF2
                                         <---------ANAC58
                                         <---------ANAC58
                                         <---------ANAC46
                                      <--------P
              <-------TEIL           <---------ANAC58
             --------->CCA1(2)       <---------ANAC58
             --------->ARR14(1)     <------MYB46(1)                                         <-------
             --------->GLK1(2)      <---------MYB46(3)                                     <--------
            --------->ARR11(1)      <------MYB83                           ----------->HVH21<-------
            <---------ARR14(2)    <---------WOX13(1)             <---------ANAC58         <---------MYB46(3)
            <---------GLK1(2)   --------->ATHB12                 <---------ANAC46       <---------At4g35610
            --------->ARR14(2) <---------YAB1  <---------ANAC46  <---------ANAC58<-----------RAV1(1)
 
tgagagtttttccaagattcggatgatttttcatatgattggttgctttggtttgtagttgtcgagttccttgggaatgtgaccttgttgcagcggttac  227900
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AGI:  At4g00500.1   
Description:  lipase class 3 family protein / calmodulin-binding heat-shock protein-related. similar to lipase class 3 family protein / calmodulin-binding heat-shock protein, putative [Arabidopsis thaliana] (TAIR:AT3G49050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39606.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69548.1); contains InterPro domain Lipase 3, N-terminal (InterPro:IPR005592); contains InterPro domain Lipase, class 3; (InterPro:IPR002921)
Range:  from: 225028    to: 227396    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g00520.2   
Description:  acyl-CoA thioesterase family protein. similar to acyl-CoA thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G01710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39602.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Acyl-CoA thioesterase; (InterPro:IPR003703); contains InterPro domain Cyclic nucleotide-binding (InterPro:IPR000595)
Range:  from: 227694    to: 231699    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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