Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ----------->HVH21                                                                                  --------->At4g35610                                                                                  ===================                                                                            ----------->RAV1(1)                                                                            <-----------HVH21                                                                            ==================RAV                                                                           ----------->HVH21                                                                           --------->ANAC46                                                                --------->YAB1    ----------->RAV1(2)                                                                --------->ATHB12  <---------At4g35610                                                               --------->ICU4 <---------ALFIN1                                 --------->ARR11(3)        --------->ZAT18 --------->ANAC58     --------->YAB1             <--------ATHB1            <---------ANAC46 --------->ANAC58     <---------ICU4             --------->YAB1       --------->O2        --------->ANAC46    --------->ICU4             <---------ATHB12      <---------REM1(1)   <---------TGA1a  --------->YAB1               --------->ICU4        <---------ANAC55(2) <---------O2 ----->YAB1          ---------->DOF2                 --------->ANAC55(2) --------->ANAC58 ------->GT1        <---------AHL20(2)               <---------O2        --------->ANAC58   ---------   tgtaaaataatgaaattcaaatttaaagcttcaatgattttgttaagacagagagacgtagcgcattgattacagacgcgacacatctgacatacaacat  221900             --------->ANAC46     <---------ZAT14                             <---------MYB52(1)                                 <     --------->ZAT14                            --------->TOE2(3)             <---------ANAC58    --- --------->ZAT6       <---------LBD16     <-----------GT1              <---------YAB1         <------ ===RAV      --------->ANAC58         <---------TOE2(3)            <---------GLK1(2)  <---------MYB52(1) -->RAV1(1)  --------->ANAC58     --------->TOE2(3)      --------->WOX13(1)   <---------ANAC58<------   ttgccactacaatgcacgactgtcttcggattaatacattaatgttacatcgttagtatcaatcttacagattataaatagcttagccgattgtttaaga  222000                                                                                                    =                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    =                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                ----------->GT1                         <----------DOF2                                               <---------TOE2(3)                        =============                                              ---------->DOF2                           <---------DAG2     <---------YAB1                      ------->GAMYB                                  <------------  <---------YAB1                        <---------ALFIN1   --------->YAB1               ------------- ---------ZAT6                        ----------->RAV1(1) <---------AHL20(2)           <------------- -------->GT1                <---------------AtSPL8   <---------AHL20(2)     ----------->GT1       -- ---TOE2(3)      --------->ARR14(2)  --------->MYB46(3)<---------AHL20(2) <---------REM1(1)      ---- ---YAB1     <-------TEIL    <---------------AtSPL3   --------->AHL20(2) <---------TOE2(3)       ----   tagtattattctaaattcatatacactcgtgcaagtacaacaacacactaaagttattaaataataaacacatttgatgtagataaactactttttttag  222100                                                                                                    >                                                                                                    -       <---------ZAT14                                                                             <-      <----------DOF2                                                                            <---  ----------->HVH21                                                                             ----- ================bZIP_DOF                                                                     <------ ---------ANAC58                                                                              ------- -------->O2                                                                                  <------ -------->TGA1a                                                                               ======= ---------ANAC58                                                                              <------ ================bZIP_DOF                                                                     ------- ---------O2                                                                                  <------ -------->ANAC55(2)                                                                           ------- ---------TGA2(1)                                                                             <------ -------->TGA2(1)                                                                             <------ ---------bZIP60(2)                                                                           ======= -------->bZIP60(1)                                                                           <------ ---------ANAC55(2)                                                                           ======= ---------ANAC46                ---------->DOF2                                               <------ ---------ANAC55(1)    <---------AHL20(2)                                                  ---------- ---------bZIP60(1)    <---------AHL20(1)                                     ------->GAMYB---------- ---------TGA1a        --------->ARR11(3)                           --------->DAG2       <---------At4g35610 =========bZIP_DOF     <---------ARR11(3)                          ---------->DOF2       --------->At4g35610 ---AGL15              --------->AHL20(2)             ---------->DOF2         ======================= -->AGL15              --------->AHL20(1)             =============================================== ----AGL3           --------->AHL20(2)         <---------ICU4      ================================== --------->STF1     --------->YAB1            --------->ICU4       ================================== ------->HVH21     <---------ATHB51      --------->YAB1 --------->ANAC58      ======================= ------->TGA1      <---------ATHB12      ----------->GT1--------->ANAC58      =======================   tgacgtgactttacaggcccaataatatattctgaaaagcccatagtaatattcacaaaagccccttgataaagttgcaacgcgcgtacttatctgacgt  222200            ------->MYC4            ------->PIF5            <-------MYC3            ------->MYC3            <-------MYC2           --------->PIF3(3)           --------->O2           <---------TGA1a           <---------ANAC46      --------->bZIP60(2)      <---------bZIP60(1)      <---------ANAC55(2)      --------->ANAC58      --------->ANAC58      --------->ANAC55(2)      ==============================bZIP_DOF      ==============================bZIP_DOF      --------->bZIP60(1)      --------->ANAC55(1)      --------->ANAC46      --------->TGA1a      --------->O2   ----------->HVH21  <-----------HVH21 --------->O2 <---------At4g35610 --------->At4g35610 --------->bZIP60(2) >>>>>>GRF7<---------O2 -------->MYB59 ----------RAV1(2) --------HVH21 ------>HVH21 ---ANAC55(1) -->ANAC55(2) ---bZIP60(2) ===================================bZIP_DOF                    ==================================HOX2a_HOX2a ---ANAC46 --------->TGA1a                                      ------>ZmHOX2a(2) -->O2<---------O2                                              ===================HOX2a_HOX2a ---O2<---------TGA1a                                          <------ZmHOX2a(2) -->TGA1a  <---------PIF3(3)                                   ====================HOX2a_HOX2a ---TGA1a  ==================================bZIP_DOF          ===================================HOX2a_HOX2a ---ANAC55(2)      ----------->GT1                             --------->At4g35610 ===================================bZIP_DOF                   <---------At4g35610 ---ANAC58 =========================bZIP_DOF                  <---------ARR14(2) ===============bZIP_bZIP                                     <---------AGP1 ---ANAC58 <<<<<<<<<<HY5                                      ------->TEIL ->TGA1   ------>NtERF2                                       <-----------ARR10 ->HVH21 <---------ALFIN1                                     --------->ARR14(2)         <---------TOE2(3) ====================MYC_MYB        <----------ID1       --------->MYB52(1)        <---------DAG2 ===bZIP_DOF<-------PIF5          ---------->DOF2     --------->ANAC46      --------->LBD16 ===bZIP_DOF------->MYC2      ----------->GT1         --------->ANAC58      ------>ZmHOX2a(1)<------- ===bZIP_DOF<-------MYC4  --------->DAG2              --------->ANAC58  --------->ARR14(2)   -------- ===============MYC_MYB  ---------->DOF2       <----------DOF2--------->GLK1(2)    <----------DOF2  < ===MYC_MYB===============================================bZIP_DOF      <---------ARR14(2) <------ZmHOX2a(1)   gtcaggtcacgccacgtggattagaaaaaaagtggtaaaagacaaaacccttttgtactcaacggatctgagtgaatcctgaaaacttttttaggatttc  222300                      <---------YAB1                      <---------YAB1                     <---------GLK1(2)                 <----------DOF2                    --------->YAB1                    <---------ANAC46                    <--------ATHB1                    <---------ANAC58                    *TSS                          ------->MYC3               <---------MYB55(2)                 <-------MYC3               ------------>CBF                   <-------MYC2               <---------ATHB12                   ------->MYC2               --------->MYB46(3)                 ------->PIF5              ------>MYB83                        <-------PIF5              --------->ANAC58                   <---------TGA1a              =============================================MYC_MYB              --------->ANAC58                   --------->ANAC46              -------->P                         <---------bZIP60(2)              ------>MYB46(1)                    --------->TGA1a            --------->AtMYB61                 <---------REM1(2)               --------->GLK1(2)            <---------MYB111(1)------>ZmHOX2a(2) <---------O2            --------->ANAC46         <-----------GT1      <------ZmHOX2a(2)  =================bZIP_DOF   --------->GLK1(1)   --------->ATHB12<---------ATHB12          <-----------HVH21           --------->ANAC58 --GLK1(1) --------->DEAR3(2)<---------ARR14(2)  --------->ANAC55(2)     --------->ANAC58 ->GLK1(1) --------->MYB46(3)--------->ARR14(2)  --------->O2   <-----------GT1      --------->YAB1<- ------------CBF   --------->ICU4  <---------ATHB12   <---------ANAC58  --------->LBD16 <-----------GT1   aaaattgatttgaaccaaccaatgattcttggatcccatgaataagccttcacgtggcttttgatttcacattccacgaaaatccaattttaactgaatt  222400                                                                                   <---------ARR14(2)                                                                            <---------TGA1a                                                                            --------->TGA1a                                                                            <---------O2                                                                            --------->O2                                                                          ------>NtERF2                                                                     <---------ZAT2--------->ARR14(2)                                                                     --------->GLK1(1)              <                                         <---------ZAT6              <---------At4g35610           --                            <------MYB83 ----------->GT1             --------->At4g35610      -------                            <------MYB46(1)                          --------->ZAT2--------->MYB52(1)                           --------->MYB59                           <---------GLK1(1)        <------                           <---------TOE2(3)            <---------ANAC58 ----------->HVH21    ------- --------TOE2(3)<---------ZAT6      --------->YAB1      <---------ANAC58 --------->DEAR3(1)   <------   tgagataattttggtttagtgatggcgattaggttgaatcatagtgtaattccagtgagcgtgaagcttggagctccgacgagagtatcggctcggagct  222500      --------->SPL7     <---------MYB52(1) <---------DOF5.7(2)                                                                            <---- <---------At5g28300     <------NtERF2                                                      <-------- -----------GT1          --------->ALFIN1                                          <---------At4g35610 ------->DOF5.7(2)     <---------ANAC46                                            --------->At4g35610 -->GLK1(1)            <---------ANAC58                 <---------MYB52(1)         <---------ZAT14<-- ---At4g35610          <---------ANAC58                <----------DOF2----------->GT1     --------->ZAT14 -->ZAT2          <---------ARR14(2)        --------->LBD16      <---------HSFB2a(2)      --------->ZAT18 ---ZAT2          --------->ARR14(2)      <---------LBD16        --------->HSFB2a(2)      <---------ZAT14   cgttaccgttcagcgttggagattggcgtggtgtttctacattttccggtgctaggcctttggttctcgcgaaggtgaaactgagagcagagagtactga  222600   <------ZmHOX2a(2)  --------->ARR11(3)  <---------ARR11(3)  --------->ARR14(2)                               --------->ALFIN1  <---------ARR14(2)                      --------->ZAT2 -----TOE2(3)            ------>NtERF2    <---------ZAT2                            ----------->HVH21 -ZAT14                 --------->DEAR3(1)<---------At4g35610                     --------->MYB52(2)< ----ZmHOX2a(1)   ----------->TGA1        --------->At4g35610             <-----------GT1   ---------   ggaagatcgagttccaattgatgacgacgacgattctactgatcagctcgtaagtgtggaatttcatttggatgattcactcgtttgtgaccagaatcaa  222700                                                                   <---------ANAC58                                                             <------NtERF2                    <-------TEIL                            ------>NtERF2                 <------MYB46(1)                           --------->ATERF1(2)                 <------MYB83                              <---------ATERF1(2)                --------->MYB46(2)                        <---------ANAC58                --------->MYB111(1)                       <---------ANAC58              <<<<<<<<<MYB98                    <---------ANAC58   <---------ANAC46              <---------MYB52(1)                <---------ANAC58   <---------ANAC58         -------->P -----------GT1 --------->MYB59    <---------ZAT18       <---------At4g35610 ------>ZmHOX2a(1) >GLK1(2)<---------MYB52(1) --------->ARR11(3)  ----------->GT1 ---------->CDC5         <---------YAB1   ttttactcttcgttttgttaggttgatgaagaaattgtgcatttcgaagagcgtgattttgctggcacagcgtgtgttcctgtatatgttatgctaccag  222800  Previous    Next  AGI:  At4g00490.1    Description:  BAM2/BMY9 (BETA-AMYLASE 2); beta-amylase. similar to BAM7/BMY4 (BETA-AMYLASE 7), beta-amylase [Arabidopsis thaliana] (TAIR:AT2G45880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39608.1); similar to hypothetical protein OsJ_029213 [Oryza sativa (japonica cultivar-group)] (GB:EAZ45730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39607.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 222320    to: 225131    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version