Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --                                              <---------AHL20(2)       --------->ATHB12            --                                             <---------AHL20(1)       <---------YAB1              ---                                             --------->AHL20(2)     <---------ICU4                ---                    ------->GAMYB        --------->AHL20(2)         --------->YAB1            -------           <-------TEIL        --------->ZAT2<---------AHL20(2)    --------->ICU4         <---------AHL20(2)       <---------TOE1(3)       --------->At4g35610              <---------AHL20(2)        --------->AHL20(2)       --------->DAG2       <---------At4g35610           <---------ANAC46               --------->AHL20(2)  ------->TEIL <------ZmHOX2a(2)         <---------AHL20(2)     --------->AHL20(2)       --------->YAB1 --------WOX13(1) --------->At4g35610 <----------DOF2     --------->YAB1  ----------->HVH21   <------   gatggacttaaggtgcgatcaactgaatttagcagctatgcttttaatttttttgtagtatcgtagttaattatcattgacatgtttgcaattaaaataa  203100        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->AGP1      <---------AGP1      --------->ARR11(3)      <---------ARR11(3)     <---------CCA1(2) --------->TOE2(3) --------ARR11(3) ------->AHL20(1)                                     --------->At5g28300                          <- ------->ARR11(3)                                    ----------->GT1                               <- ------>RVE1(1)                                    --------->At4g35610  <---------ANAC58    <-------- ------>CCA1(1)                                    <---------At4g35610  <---------ANAC58  <-------TEIL -->AHL20(2)                           ------>ZmHOX2a(1)        --------->YAB1            <---------YAB1 ---AHL20(2)                 --------->YAB1 <---------GLK1(2)--------->YAB1    <---------TOE2(3)   <-   atatcttagatcttattttggaccatgcctatagtattttcctatagatgctcagcagtaaaataagaatagtttcttactgaggctgaatgttcattgt  203200                 --------->ICU4                 <---------YAB1              --------->ICU4              <---------ATHB12      <------MYB83--------->ATHB12                                      --------->YAB1      <------MYB46(1)    ------------>CBF                              <---------YAB1  --------->ATHB12<---------ICU4                                      --------->AHL20(2) --------ANAC58--------->YAB1                             ---------->DOF2       <-------TEIL --------ANAC58<---------ICU4                     --------->REM1(1)  <---------ICU4 ----CBF      <---------YAB1                  <---------ANAC58      --------->ICU4   <----------DOF2 --------ANAC46-------->HAHB4 --------->ZAT14 <---------ANAC58     --------->TOE2(3)<---------ICU4   agcttgataggttgtaatgatgatttcttcaatgtagtcatataagatgcttacaactcagaaagtctacattattataagtttcatcttttccgatgtt  203300                                                                                         <---------AHL20(1)                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(1)                                                                            --------->ARR14(2)                                                   <---------ARR14(2)       --------->GLK1(2)                                                   --------->ARR14(2)       <---------ARR14(2)                                                   --------->GLK1(2)       <---------GLK1(1)                                                <---------TOE2(3)          --------->GLK1(1)       <-                                          <---------YAB1           <----------DOF2      --------->YAB1                                    <---------ARR11(3)           ----------------->AGL1 --------->AHL20(2)            ------>ZmHOX2a(1)       --------->ARR11(3)   ------->TEIL     <------ZmHOX2a(1)<---------           --------->TOE2(3)     <----------DOF2<---------TOE1(3)<-----------------AGL1 <---------AHL20(2)     <---------AHL20(2)      <---------LBD16<------------CBF    ---------->ID1  --------->LBD16   <--   agagtttttaattccttattccactagttttcgcgcattatcttgtaattgaggttctgaacctttggcctttacaggaatccgaagaaattatattgtc  203400                                              --------->ANAC58                                              --------->ANAC58                                              --------------->AtSPL3                                             <-------TEIL                                           <---------SPL7                                         <---------------AtSPL8                                         <---------------AtSPL3   <-------TEIL---------->DOF2       ---------->DOF2                                      ------>ZmHOX2a(2) --------TOE1(2)               <---------ICU4--------->SPL7     ------------>CBF        --------->ARR11(3) ---CBF  <----------DOF2  <---------------------WRI1--------->HSFB2a(2)                 <---------ARR11(3) ---------RAV1(2)     <-------GAMYB--------->ZAT18  <---------HSFB2a(2)        <---------MYB52(1)   <   ccaggtccatactttctcaaagcctgttgtccataagtgcaaagaggtacggtactagaaattatagacaatgttgtctcccttatttgtgatctctatt  203500                                                                                           <---------ZAT14                                                                                           --------->ZAT14                                                                                      --------->ZAT14                                                                                      <---------ZAT14                                                                                      --------->ZAT18                                                       ---------->DOF2             <---------ANAC58                                              --------->ANAC58                     <---------ANAC58--                                              --------->ANAC58                     <---------ANAC46--                                            <-----------RAV1(2)             <---------ATHB12   ------                                           --------->LBD16                --------->WOX13(1)   ------  <-------TEIL                            --------->ANAC46    <---------ANAC46 ------->TEIL---------- ---------GLK1(1)    ----------->GT1     <---------LBD16--------->DAG2  <---------YAB1<---------ZAT18   ggagttcatttgtgtttcacatgaagttaaattcaatttctatcccgcaggcagtcagaaagtgtcttagagctatcaatgaatctcgtgcactgaagcg  203600                                                                                      <---------YAB1     <---------ATHB12                            <---------ZAT14                  <---------ANAC58 ------->ANAC58                        <-----------GT1                            <---------ANAC46 ------->ANAC58                       <---------AHL20(2)<---------ZAT14           <---------ANAC58 --->ANAC58                   <----------DOF2    --------->ZAT14           --------->YAB1     <------ --->ANAC58                   ------>ZmHOX2a(1)  --------->ZAT18          <---------ATHB12    <------ >DOF2--------->YAB1       <---------ATHB12<----------DOF2              --------->WOX13(1) --------->YAB1   caaggtaatcaagagactctcagactccaatccttttcaatttatcttttgtgcagagttcagggtttcggtcccaatcatattgcttataattcataat  203700                                                                                            =========                                                                                            =========                                                                                            <--------                                                                                        --------->ARR11(3)                                                                                        <-----------HVH21                                                                                    ---------->DOF2                                                                                    =================                                                                               --------->LBD16-------                                                                              <---------HSFB2a(2)                       <------MYB83                                           --------->HSFB2a(2)                       <------MYB46(1) --------->ALFIN1                       <---------HSFC1(1)   --           --------->MYB52(1)        <---------ANAC58                         --------->HSFC1(1) <---       --------->WOX13(1)            <---------ANAC58                     <---------GLK1(1) ---------      <---------AHL20(2)<-----------HVH21                                 --------->GLK1(1) --------- ---ICU4  --------->AHL20(2)         <---------ANAC46    <----------DOF2 --------->ARR14(2) <-------- ---GLK1(2)<-----------GT1<-----------RAV1(2)            ============================================   ctccctattcaattaactggcaggctggtcaggtttatggggtgcctctctctggttcgcttctatgtaagcctggatttccagaacaaaggtcatgtgg  203800  <----------ID1                                                                                ----- <------ZmHOX2a(1)                                                                              <---- ===========================HOX2a_HOX2a                                                  <---------At4g35610 ================bZIP_DOF                                                             <-------GAMYB ================bZIP_DOF                                                             =============== -TGA1a                                                                              <---------MYB46(3) =bZIP_DOF                                                                           <-----------RAV1(1) -->ALFIN1                                   <---------ANAC58                        --------->MYB52(2) ------->ALFIN1                              <---------ANAC58           =============HOX2a_HOX2a----- ------ANAC46                              <---------YAB1               <---------At4g35610     ===== >TGA1a                              --------->AHL20(2)                 ------>ZmHOX2a(1)--------->At4g35610 >O2                               <----------DOF2                      ----------->RAV1(2)     ===== -O2  ---------->DOF2------>ZmHOX2a(2)  <---------YAB1                  =========================RAV =bZIP_DOF ---------->DOF2  ----------->RAV1(2)              <-----------GT1  ------>ZmHOX2a(2) <----   ggaggagacaaagaaaagatggatcgaggtacctggccttttattatgcttatctaaacttcttaacaattctcctctgatccatgtttgttgctgactc  203900                   ==================================================================================       ------->GAMYB ---------->DOF2    <---------ARR14(2)    --------->ARR14(2)                                                                          <----    --------->MYB52(1)                                                                        <------ ---->TGA1a        <---------------AGL15                                                    <-------- -----O2          --------->TOE2(3)                                                        <---------ANAC58 =====MYC_MYB--------->ARR14(2)           <---------ICU4                                   <---------ANAC58 ---->O2     <---------ARR11(3)  <---------MYB59                              --------->At4g35610   < ===============================bZIP_DOF <---------YAB1                      ------->GAMYB<---------ZAT18 ==============MYC_MYB          <---------ANAC55(2)                        ---------->DOF2--------->ZAT18 -----TGA1a  <---------ARR14(2) --------->ANAC55(2)                    --------->YAB1 --------->ATHB12   gtggcataactgccatatattcttaaagaagaatacttaactcattcttgctctcattttttcacagagtttatcacaacagcacaaacgattgcgctct  204000  Previous    Next  AGI:  At4g00450.1    Description:  CRP (CRYPTIC PRECOCIOUS). similar to 2-oxo acid dehydrogenase, lipoyl-binding site [Medicago truncatula] (GB:ABD32834.1); similar to hypothetical protein OsJ_024377 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40894.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39617.1) Range:  from: 203471    to: 211003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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