Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->ANAC46                  --------->ANAC58                  --------->ANAC58                <---------ALFIN1               --------->DEAR3(1)               --------->RAP2.3(3)              <------NtERF2             --------->PCF2             ------>NtERF2           ------>NtERF2           <---------ATERF1(1)           <---------At4g35610           --------->At4g35610           <------NtERF2           --------->ATERF1(1)          --------->DEAR3(1)          <---------RAP2.3(1)          <---------ATERF1(1)    <----------DOF2       <---------YAB1                         <-----------GT1  ------>ZmHOX2a(1)<---------ATHB12                           ----------->GT1 --ANAC55(1) <---------ZAT18        <<<<<<<<<GATA-1          --------->DAG2 --ANAC58<---------DEAR3(1)--------->YAB1                   ---------->DOF2 --ANAC58<---------RAP2.3(2) <---------YAB1            --------------->AGL15 --ANAC55(2) <---------ATERF1(1)   <-----------GT1     <---------------AGL15                       <- ->ANAC55(2)--------->DEAR3(1)   <---------AHL20(2)<----------DOF2                        <----------DOF2   tctcctctttggccgcgcccactcaattcttataatttatctatttgcaccctctttctctaaaaagttacaatttgacccctatagtttcactttcact  193500            <<<<<<<<<GATA-1           <-----------GT1                                                    --------->ANAC58         <---------AHL20(2)    ------>ZmHOX2a(1)                              --------->ANAC46     <---------YAB1     <---------DAG2                           <---------DAG2   --------->YAB1       <----------DOF2                          <----------DOF2  <---------YAB1       <---------DAG2                         <-----------GT1 --------->ANAC58 --------YAB1        ------->TEIL    --------->ANAC46       <-----------GT1 ---------->DOF2 <--------   tattcttataatttatctatttgcacctttttcctctaaacgttacaatttgacccctatattttcacttttattcatacaagcccattttgtttttctc  193600                                                                               --------->ALFIN1                                                                              <-----------HVH21                                                                           <---------LBD16                                                                          <---------At5g28300                                                                          --------->MYB52(1)                                                                     -------->ATHB1                                                                     <--------HAHB4                --                                                                     <---------AHL20(2)            <-                                                                     --------->AHL20(2)           <--                                                                     --------->ATHB51         XXXXXXX                                                                    --------->ICU4         <---------YAB1                            <-----------HVH21                       <---------ATHB12       <---------REM1(1)                            <-----------TGA1                        <---------ATHB51     --------->YAB1                           --------->bZIP60(2)                    --------->WOX13(1)     <---------ICU4                           --------->ANAC46                     <------ZmHOX2a(2)        -------->HAHB4                           --------->O2                        <---------ARR11(3)       --------->ICU4  <----------DOF2         ------>ZmHOX2a(1)                    --------->ARR11(3)      <---------TOE2(3) ---GT1             --------->MYB46(3)--------->O2     <----------DOF2   <-----------GT1<---------ATHB12   tctgctttcatgctcgcagacaacaatcctcgtcactgccatgtctcaaattcagagctttgagagatcaattatttaccggtgaggctaatgatgaagg  193700         --------->RVE1(1)        <---------ARR11(3)        --------->ARR11(3)        --------->GLK1(2)       --------->CCA1(1)       --------->RVE1(1) ------->At4g35610                              <---------DAG2                 <---------MYB52(1) ------GAMYB                        ---------->DOF2                           <-------GAMYB -------MYB46(3)                 --------->AtLEC2    <-----------GT1         <-----------RAV1(1) XXXXXXXXXXXXX>MIR2937 <----------DOF2          <----------DOF2            ------>ZmHOX2a(1)   <-----   ctgttgaaaaaatctctgcaaaatacttttcttccatgtaaagcttctaactttttctctctctctctctctctctcctctgttgtttctgtagagagga  193800                                                                               *TSS   <-------GAMYB                                                                            --------->ANAC58                                                                            ----------->HVH21                                                                            --------->ANAC58                                                                       --------->ANAC46                                      <----------DOF2               ---------->DOF2  <---------MYB46(3)           --------->PCF2       --------->KAN4(2)                --------->ANAC58   <---------TOE2(3)           <---------PCF2     <---------WOX13(1)         --------->ALFIN1   --------->ANAC46      --------->ATHB12       <------------CBF          ------>ZmHOX2a(1)    --------->O2     <---------YAB1        <---------YAB1            ----------->RAV1(2)    --------->bZIP60(2) -ZmHOX2a(1)            <------------AtMYB77    <----------DOF2  --------->ANAC58   <---------AtMYB61   atagaagatgatgggcccattttccaactgtgattgttctctttatatttctttctcctgtggaggctagcaaaggccacgacgttgtggttgtcaaatt  193900                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                <----                                                                                              <------                                                                                        <---------ANAC58                        <---------YAB1                                                  <---------ANAC58              <----------DOF2                                  <----------DOF2     --------->MYB52(1)              <---------DAG2                       <----------DOF2  <---------------AGL15  <---------   --------->DAG2     --------------------->WRI1   <---------DAG2  ----------------->AGL1<----------DOF2  ---------->DOF2  <-----------GT1     <---------CCA1(2) <----------DOF2      --------->ZAT14 -------   ggcataaagttttccacttttttactctgattttttctcccatttctctctcactttttctttgcctttgcccaattcagagaactaatggctttgtcgg  194000                                                                                          ------>ZmHOX2a(2)                                                                                         --------->GLK1(1)                                                                                         <------ZmHOX2a(2)                                                                               ==================HOX2a_HOX2a                                                                               <------ZmHOX2a(1)                                                                               =================HOX2a_HOX2a                                                                              ----------->GT1     <--       >>>>>>>>>GATA-1                                            ------>MYB46(1)       --------->ARR11(3) -------WRKY38(1)                                                 ------>MYB83<----------ID1 <------- -------WRKY12                                                   ----------->RAV1(1)    <---------ARR11(3) ----->WRKY18(1)        <----------DOF2                         --------->AtMYB61       <---------AGP1 -------HVH21          <---------ICU4                           --------->MYB46(3)     --------->RVE1(1) ---DREB2C(2)      <---------AHL20(2)        <---------ANAC58  --------->MYB46(3)   ---------->DOF2 --RAV1(1)        --------->AHL20(2)         <---------ANAC58--------->ANAC46<---------TOE2(3)   <--- -->ETT(1)        <---------AHL20(2)<----------DOF2 ---------->DOF2        --------->ICU4<---------GLK1(1)   tcatcgatagataaacaaaatttaatctttatctctctctttctcttgtttgtcaaaagatgcccaccaacacagaaatgaggaaaaaaagatctctttt  194100                                                    <---------MYB46(3)                                                   <--------P                                                  <-------GAMYB                                     <                                                 <------MYB46(1)                                -----                                                 <------MYB83                           <-----------GT1                                                <---------MYB46(3)                ------->TEIL  <----                                                <------MYB46(1)                 <-------TEIL    =====              ----------->GT1                   <------MYB83               <---------TOE2(3)  ------>ZmHOX2a(2) -------AHL20(2)                              <<<<<<<<<MYB98              ---------->DOF2 <---------YAB1 ---DOF2     --------->ZAT6                   <--------P                 --------->AHL20(2) <-------- ------AHL20(2)          ----------->GT1     <-------GAMYB               <---------AHL20(2) ---------   ttatttgaatgttgaacagtaagaagaaggtttattctattctattgggttgggttgttcatcaactttggaaatttaaagatgcattttttatgatcct  194200                                            <---------ANAC58                                           --------->HSFC1(2)                                           --------->ZAT2                                           <---------ZAT2         <----------DOF2                   <---------HSFC1(2)      --------->LBD16                 --------->ANAC46                              =================      ------>NtERF2                   --------->ANAC55(2)                           <-----------RAV1(2)     --------->ANAC46                 --------->ANAC58                            <-----------HVH21    <---------LBD16                   <---------ANAC55(2)                    --------->DAG2  <-----------GT1                     --------->ANAC58                 <---------LBD16 -----------GT1                  --------->YAB1 <---------ANAC46       --------->TOE1(2) ->ZmHOX2a(1)             ------>ZmHOX2a(2)<---------HSFB2a(1)       --------->GLK1(2) ------DOF2       --------->ATHB12   <---------LBD16      <-----------GT1   ---------->DOF2 ================================HOX2a_HOX2a<---------ANAC58        <---------ARR14(2)          <---- -ARR11(3)    <---------MYB46(3) --------->ATHB12   ----------->GT1 <---------GLK1(2) --------->At4g35610 >ARR11(3) <-----------RAV1(1)  <---------YAB1--------->ALFIN1      --------->ARR14(2)<---------At4g35610   tttttctccgcctttgttgttgatttgatcgtgtatgattacggaagcttgggggggtttttatcagacagaacctggaaaagttgtcagatgaaacaat  194300                                                    --------->YAB1                                                   <---------YAB1              =====================HOX2a_HOX2a     <---------ATHB12 <---------ANAC58                             --------->ANAC58 <---------ANAC46           ------>ZmHOX2a(1) --------->ANAC46 <---------ANAC58     <----------DOF2         --------->ANAC58        <XXXXXXXXXXXXXXXXXXXMIR156G =======RAV   <------ZmHOX2a(2)         <----------DOF2    <---------ANAC58                   <------ -------RAV1(1)       <---------DAG2    <---------DAG2     <---------ANAC58           ------>NtERF2   gtggcttggagattggatcatcaacttttcctctgttttcaactttataagctatcattttgcttaatcttcttcattctcttctctcggccttggcttt  194400  Previous    Next  AGI:  At4g00440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39618.1); contains domain PTHR21726:SF4 (PTHR21726:SF4); contains domain PTHR21726 (PTHR21726) Range:  from: 193879    to: 198579    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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