Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ----------->RAV1(1)                        ------>NtERF2                        ==========================RAV                       <---------ALFIN1                       --------->DEAR3(1)                      --------->ERF1                      --------->ATERF1(1)                      <------NtERF2                     ------>NtERF2                     <---------ATERF1(1)                     --------->ABI4(1)                    --------->ATERF1(2)                    <---------ATERF1(2)                    --------->ANAC58                    --------->RAP2.3(2)                    --------->RRTF1(3)                    --------->RRTF1(2)                    --------->DREB2C(2)                    --------->RAP2.3(3)                    --------->RAP2.6(2)                    --------->DEAR3(1)                    --------->ANAC46                    --------->ANAC58                   --------->RAP2.3(1)                   --------->ERF1                   --------->RRTF1(1)                   --------->RAP2.6(1)                   --------->ATERF1(1)                   --------->ORA47(2)                  --------->LBD16                  <---------RAP2.3(1)                  ------>NtERF2             --------->KAN4(2)            --------->KAN4(1)            <---------ICU4            <---------KAN4(1)           <---------YAB1           --------->ICU4           <---------KAN4(2)    <---------AHL20(2)                         --------->ANAC58 -------ARR11(3)  <---------ATERF1(1)                             --------->ATHB51 ------>ARR11(3)  <---------At4g35610                             --------->YAB1 <---------AHL20(2) -------AHL20(1)  --------->At4g35610   <---------ZAT2  <---------YAB1     --------->ANAC58 <-------- ------>AHL20(1) --------->ANAC46     <-----------RAV1(2)        --------->ICU4 --------->AHL20(2)<-- ------CCA1(2)  <---------LBD16--------->AHL20(2)  --------->ZAT6<---------ATHB12--------->AHL20(2)   tatcttgttagcgattattccgccgccaccatattaaatgccagatgggtctatctctattaatgcaataatcgaactcgcatttaatttgtattttttt  145500                             <---------AHL20(1)                             --------->AHL20(1)                     ----------->GT1                    --------->DAG2                  ---------->DOF2                                                                   -         --------->CCA1(2) <---------AHL20(2)                                                  <-----        <---------ARR11(3) <---------AHL20(1)<-----------GT1                                   ------        --------->ARR11(3)--------->YAB1  ----------->GT1                                      <-----    ---------->DOF2--------->DAG2        --------->DAG2 <-------TEIL  ---------->DOF2          ------ -AHL20(2)    --------->ANAC58          ---------->DOF2--------->CCA1(2)                    --------- ---------GT1 --------->ANAC58  <<<<<<<<<<GT-3b<---------YAB1<---------AHL20(2)        <------ZmHOX2a(1)   ttacaacaaagataccaagaaaaaggtataatatttttcttataaagttactattagatacattttatatgaaaaaggcttagattagaggaaataataa  145600                                             <---------ANAC46                                             <---------TOE1(3)                                             <---------TOE2(3)                                           --------->MYB52(1)                 <------ZmHOX2a(1)        <---------AHL20(2)                <---------ARR14(2)             ----------->HVH21        --------->AHL20(2)              <------MYB46(1)                  --------->ALFIN1  <--------P                            <------MYB83                   --------->At4g35610 ---------->GT1                        --------->MYB59--------->ANAC58 <---------At4g35610 ----AHL20(1)     --------->ATHB12--------->ICU4      --------->ANAC58 <------MYB46(1) --->AHL20(1)    <---------YAB1 --------->YAB1        --------->ANAC46 <------MYB83             <---- ----AHL20(2)  --------------->AGL15   <---------TOE2(3)       --------->ATHB12    <---------YAB1  -- --->AHL20(2)  <----------DOF2 <---------ATHB12<-------GAMYB  <-------TEIL  <---------TOE2(3) <------ >YAB1 --------->AHL20(2)    --------->WOX13(1)--------->At5g28300   <-----------RAV1(2)      -------   aatggtagattaaattactttgattagaagtcaatcaatattaggttacggttaacaaggaagattcataggcaggtgaaggatgatgagaattgagacc  145700        --------->AHL20(1)        <---------AHL20(1)        <---------ARR11(3)  --------->ANAC58  --------->ANAC46  --------->ANAC58                        <-----------GT1 -----MYB59                   ----------->RAV1(1)                                                   = ------>P                    <----------ID1                                                         - ---ARR11(3)           ----------->HVH21  <---------WRKY18(1)               <---------YAB1 --------->HSFB2a(2) -->ARR11(3)           <---------YAB1    ----------->HVH21               ----------->GT1   <---------HSFB2a(2)   ttaccagcaaaatattcaatagcctctgatagcgacagagggtttgaccttctgtagaatggaccatggtctaaaatgtttatagcccatgtttcagaaa  145800                                    --------->TOE2(1)                                    --------->TOE1(1)                                   --------------->AtSPL8                                 <---------TGA1a                                 <---------O2                                 =========================bZIP_DOF                                 --------->TGA1a                                 <---------bZIP60(1)                                 --------->bZIP60(1)                                 --------->O2                              ------->GAMYB                              ----------->HVH21                              =============MYC_MYB                     --------->ARR14(2)                     <---------ARR11(1)                    <---------CCA1(2)                                                --------->AHL20(2)          --------->ATHB12    --------->TOE2(2)                                      --------------->AGL15          <------------ATHB5  --------->DEAR3(1)                                     <---------------AGL15          --------->YAB1     --------->MYB46(3)                          --------->ATHB12          <---------ICU4     --------->DEAR3(2)                          <---------ICU4          <--------ATHB1   --------->MYB52(1)                            <--------HAHB4         --------->ICU4 --------->TOE2(3)               <---------AHL20(2)   --------->MYB59    -----         <---------YAB1 --------->TOE1(3)         ----------->GT1        --------->ATHB51      ------         <---------ATHB12------>ZmHOX2a(1)     ---------->DOF2           --------->YAB1     ---------     ------------>CBF<---------ARR14(2)      <---------AHL20(2) --------->CCA1(2)   ----------------- ==========================================bZIP_DOF<---------ARR11(3)   --------->ICU4     --------->DAG2 --------->DOF2   <---------ANAC55(2)<---------SPL7--------->ARR11(3)   --------->AHL20(2)---------->DOF2   acaaaagcccaatgattagcccgtatccttaaccgacgtcgtactatttaaaaggtatttaatgagatttgagaataattaggcaaactaaataaagtaa  145900                                                                                   <------NtERF2                                                                                  --------->ANAC58                  --------->ANAC55(2)                                             ------>NtERF2                  <---------ANAC58                                                --------->ANAC58                  <---------ANAC58                                              <------NtERF2                  <---------ANAC55(2)                                          ------>NtERF2                --------->AHL20(2)                                             <---------ATERF1(1)    *TSS        <---------AHL20(2)                                            <---------ETT(2)  <------ZmHOX2a(1)      <---------YAB1                   <---------ANAC46    --------->ETT(2) ---->DAG2      <-----------GT1    --------->KAN4(2)  --------->At4g35610     --------->DEAR3(1) ---->DOF2   <---------ICU4    ----------->GT1        --------->GLK1(1)     <---------ATERF1(1) -->GT1      --------->YAB1   <---------TOE2(3)       <---------GLK1(1)     <-----------HVH21       < >AGL3      <---------YAB1--------->YAB1        ---------->DOF2            --------->ANAC46         <   agtaggattacagtataattacttactatgatgaggttattcgactagagaaaaggagctctgtgtgtcgaaaccctccgtcgccagcatttattcttct  146000                                                  <---------TOE1(2)                                                  <---------TOE1(3)                                                  <---------TOE2(2)                                          ------>NtERF2                                          ===================RAV                                          ----------->RAV1(1)                                         <---------ETT(2)                                         --------->DEAR3(1)                                         ----------->HVH21                                 <---------CCA1(2)                                        --------->RAP2.3(1)                           <-----------GT1                                       ------>NtERF2                                -------->HAHB4                    --------->ANAC58   --------->LBD16 --------->ARR11(3)      <---------MYB52(1)                    --------->ANAC46   <---------ATERF1(1)                   ----------->GT1                    --------->ANAC58  <---------DEAR3(1)            <---------ZAT14 <---------ICU4           --------->LBD16 --------->TOE2(3)--------->REM1(1)       <---------ZAT18<---------ATHB51         <---------LBD16----------->RAV1(1)<------NtERF2      --------->DOF5.7(2)  --------->ICU4 ---------DAG2    --------->YAB1<---------GLK1(2)<-----------RAV1(2)--------->ZAT14<---------YAB1 ----------DOF2 --------->GLK1(2)    <---------LBD16   <---------ARR11(3)    <---------MYB46(3)<-----   cacttttcttcaccggagaatcacgacaacatcaaattctccggcgacatctcaggttatcttcgtttactgctctcatcggttaattattccatctctt  146100                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58                  <----------DOF2                <------NtERF2              <---------DEAR3(1)                                               <---------ZAT14              <---------RAP2.6(2)                                              --------->ZAT14             --------->ATERF1(1)                                            <---------ZAT6         --------->LBD16            --------------------->WRI1          <---------SPL7        --------->ANAC46    <----------DOF2                            <---------ANAC58        --------->LBD16 <---------ZAT18                                <---------ANAC58       <---------HSFB2a(2)  <---------DAG2     <---------RAP2.6(2)   <---------ANAC46       --------->HSFB2a(2)------->TEIL        --------->RAP2.6(3)   <-------TEIL   <-----------RAV1(1)       <---------LBD16  <---------ZAT14    <----------DOF2      <---------TOE2(3)  <---------ZAT6 -----DOF2  <---------ATERF1(1)  <------------------------ANAC81<---------TOE1(3)<---------ANAC46<---   tttttgtttcccggagtcggctttcgtgtactttttgtttttggtcttttcggcttcttcaattttagggttcgcgtactgtttagtgttgtttagtttc  146200                                                            ----------->GT1                                                      <---------YAB1                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                --------->ARR11(3)                                                --------->ARR14(2)                                                <---------ARR11(3)                                                <---------ARR14(2)                                                <---------AGP1   --------->ANAC55(2)                                                <---------ARR14(3)                                                <-----------ARR10<---------ANAC55(2)          <---------ANAC58               <---------YAB1     <---------ZAT6--------->YAB1   <---------TOE2(3)          <---------ANAC58   <---------ANAC46   --------->ARR14(3)       <---------ATHB12  <---------TOE1(3) ------YAB1            <-----------RAV1(1)    ----------->ARR10 <-------TEIL   <-----------GT1      <   tgatttagatgtgcttactgtgttcatgttgtcgtctattcttatgagaagatcttatggtagagttacatatcaatgatgttaccaattttgaaggtta  146300                                                <-----------HVH21                                                <-----------TGA1                                               <---------TGA1a                                               --------->TGA1a                                               <---------O2                                               ================================================MYC_MYB                                               <---------bZIP60(1)                                               --------->ANAC46               <---------YAB1                  --------->O2              --------->AHL20(2)      ===================bZIP_DOF              <---------AHL20(2)      <----------DOF2     <---------ANAC46       ----------->GT1    --------->bZIP60(1)                    <--------P     <---------YAB1       --------->TGA1a  <---------ANAC58           <---------WRKY18(1)   <---------ANAC46       <---------TGA1a  <---------ANAC58--------->ATHB12     ------>ZmHOX2a(1) -----------RAV1(1)       =======================bZIP_DOF <---------YAB1    --------->ARR14(2)   ttgtgttgtgtttgattaaaattggctcaagtgtgaaatgcttttgctcgcgtcactgttttcattgcaacttgactgaatcctagaggttgttttagaa  146400  Previous    Next  AGI:  At4g00335.1    Description:  RHB1A (RING-H2 finger B1A); protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G41350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39681.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 145904    to: 148339    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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