Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --------ANAC58 --------ANAC46  <---------ARR14(2) --------TGA1a   --------->ARR14(2) --------O2    ----------->GT1 --------ANAC58--------->LBD16 --------bZIP60(2) ------->O2  <-------TEIL --------ANAC55(1)                                                                               ---- ------->TGA1a<---------ANAC46                                                               -------- --------ANAC55(2)    <---------AHL20(2) ------>MYB46(1)                                     -------- ------->ANAC55(2)--------->GLK1(1)    <---------MYB59                  ------->TEIL         -------- -->ANAC58   <---------LBD16     <----------DOF2             <---------YAB1                  -------- -->ANAC58 --------->ARR11(1)    --------->TOE2(3)        <---------AHL20(2)         --------->AHL20(2) -GT1  ---------->DOF2--------->AHL20(2) ------>MYB83     --------->AHL20(2)      <-----------GT1----   tacgtggctaaaagatgcggatatataaatctcatctttaacctaatgttatgggatgattttattatacaatgaacttctatataactaaatacacgca  86500      ----------->GT1 --------->AtLEC2 ----->ANAC58                                 <---------AHL20(2) ->ANAC46                     <------ZmHOX2a(2) ->ANAC58  --------->ARR11(3)<---------ARR11(3)              <---------ANAC55(2) ->ANAC55(1)           ------->TEIL          --------->AHL20(2)----------->HVH21             -------- ->ANAC58  <---------ARR11(3)--------->ARR11(3)     <-------TEIL                             <------- ----->ANAC58        <<<<<<<<<EIN3       --------->AHL20(1)  --------->ANAC55(2)             --------   tgcatgcatagtaaatctttcaatgtatatagatcatcaaacatatattatatatacataaatatgtgacaatattgggttttatatagttgaatacctg  86600                          ------->TEIL                          --------->ARR14(2)                          <---------ARR14(2)                       --------->ANAC46                       --------->ANAC58                                      <---------ETT(2)                       --------->ANAC58                                      --------->bZIP60(1)                      ------>MYB46(1)                                        <---------bZIP60(1)                      ------>MYB83                                           <---------TGA2(1)                     --------->MYB52(1)                                      --------->ETT(2)                    --------->AtMYB61                                        --------->TGA2(1)  -----              --------->CCA1(2)                                            --------->REM1(2)    <----             --------->ARR11(3)           --------->HSFB2a(2)             ----------->HVH21     <----             <---------ARR14(2)           <---------HSFB2a(2)             ----------->TGA1     ------           ----------->ARR10  --------->LBD16                           <---------ANAC58       ------ --->RAV1(2) --------->ARR14(2)          ------>ZmHOX2a(2)              <---------ANAC58     <------- --ANAC55(2) --------->ARR11(1)        --------->ARR14(2)         --------->ANAC58<---------At4g35610 ->ANAC55(2) <---------ARR11(3)        <---------ARR14(2)         --------->ANAC58--------->At4g35610   atgttgaagggcgaagatatgaccaacgcatccgtagacgggatcgcgaagcctagccaatgcctcgtaagtaagcgtgacgacagcgtccagtctccgg  86700                                                             ----------->HVH21                                   --------->ANAC58         --------->At5g28300                                   --------->ANAC58        ----------->GT1                    <---------ANAC58     --------->LBD16   <---------ANAC46                    <---------ANAC58   <------NtERF2      <---------DEAR3(1)           --------->YAB1        <---------ANAC58       --------->DEAR3(1)       --------->ICU4         <<<<<<<<<MYB2            --------->ANAC46 <---------ANAC46  --------->ZAT2<---------ANAC58      --------->ANAC58           --------->ANAC46 ---->ZAT2 <---------ICU4   --------->ALFIN1         <---------AtLEC2  --------->TGA1a -----ZAT2--------->ICU4    <---------ANAC58        --------->ZAT18    --------->O2 -----At4g35610  <------ZmHOX2a(1) --------->ANAC46 <---------ZAT14    <---------TGA1a   ---------->DOF2 --->LBD16<---------YAB1    <---------ANAC58        <---------ZAT18    =============================bZIP_DOF >NtERF2<---------ICU4      <---------DEAR3(1)      --------->ZAT14    --------->bZIP60(2) --LBD16--------->YAB1     <------NtERF2--------->LBD16--------->ANAC58<---------O2     --------->YAB1   ctggctggaatcatcatgaggagcttggaggcgttgctcgccccgaaaaccttgtgcacggccgtgaaatgagacgtcccttccaccgaatcaaagtagg  86800                                                            --------->ANAC46                                                         --------->AtMYB61                                                       ------->TEIL                               <------NtERF2     ------>NtERF2                             <---------DEAR3(1)  <------NtERF2  --------->MYB52(1)                           <-----------HVH21    --------->RAP2.3(2)                          <---------ANAC58      --------->DEAR3(1)        <---------ANAC58                          <---------ANAC58      --------->RAP2.3(3)       <---------ANAC58          -                       --------->ARR14(2)      --------->ATERF1(1)    --------->ABI4(2)             -                       <---------ARR14(2)      <------NtERF2<---------ALFIN1   <---------At4g35610  -                      <---------GLK1(1)        --------->DEAR4(2)     <---------MYB46(3)            <                      --------->GLK1(1)        --------->ORA47(2)    <---------AtMYB61              -                  --------->ANAC58             --------->RAP2.3(1)   <---------DEAR3(1)             -                  --------->ANAC58            <---------RAP2.3(1)    --------->ALFIN1           XXXXX              <---------At4g35610             <---------ATERF1(1)   <---------MYB52(1)         ------              --------->At4g35610            --------->ANAC46 --------->MYB46(3)      <----------DOF2   gagcgaagacacagtcagcaacgcatttccgtcggagaaacttacatgcgccgcatggacctccacaaccggtggtgcttccgctcatcttttatgtcaa  86900                                       --------->AtMYB61                                       ----------->RAV1(1)                                       <---------ALFIN1                                      --------->MYB46(3)                                   <---------ETT(2)                                   --------->WRKY12                                   --------->DEAR3(1)               <---------LBD16     --------->ETT(2)   --------->MYB52(1)              --------->WRKY38(1) -------->ANAC46                  <------NtERF2 -------->ANAC58                  --------->ATERF1(1) -------->ANAC58                <---------DEAR3(1) ---------ANAC55(2)          <---------bZIP60(1)       ------------>CBF -------->ANAC55(1)          <---------ANAC46     ----------->TBP -------->ANAC55(2)       <-----------RAV1(1)    <---------AHL20(2) <---------ARR11(3) XXXXXXXXXXXXXXXX>MIR447A/B  --------->bZIP60(1)--------->AHL20(2)  --------->ARR11(3) ---->DOF2     <---------ANAC46<------NtERF2   <---------YAB1 ---------->DOF2       --------->CCA1(2)   agacgtaacgttttgtttgggggaagttgtgtcgtcgtcgaccacagttattatatatccaatccaaagagatgtttaagagagagagatggatgggttt  87000                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                 <---------PCF2                                                    --------->ANAC58           --------->MYB55(2)                                                    --------->ANAC58           <---------MYB46(3)                                                --------->AtLEC2              --------->ALFIN1                                                --------->ANAC58              <---------ANAC46                                                --------->ANAC58            <---------MYB46(3)                                               >>>>>>>GRF7              <---------AtMYB61 --------->YAB1                                         <---------ANAC58               <-----------RAV1(1)  <-------                                         ------>ZmHOX2a(2)           <----------DOF2     <---------YAB1                                       --------->ARR11(3)           <---------ANAC58   --------->YAB1                                       <---------ARR14(2)       <---------ANAC58<------MYB83---------                                       --------->ARR14(2)  --------->YAB1   --------->MYB55(2)                                      <------ZmHOX2a(1)    <---------ICU4  <---------AtMYB61<--------                             <---------ANAC46 <-----------RAV1(2)   <---------ANAC58 <-----------TBP      --------->AHL20(2)  --------->ALFIN1  <-----------HVH21   <---------ANAC58<------MYB46(1)  <---------YAB1        <---------ANAC46 <---------ANAC58--------->ARR11(3)--------->ALFIN1 <--------   gtttatgaataaatgtttttaagttgatgtggagcatagaggatcgtgtcaggcaagaaaatcatgtcttgcttttggtggtgggtcatttataatcatt  87100                                                                          <----------DOF2                                                                          <---------DAG2 ->ATHB12                                                              <-----------GT1 ->YAB1                                                           --------->ALFIN1 -HAHB4                                                         <---------ANAC58 --ICU4              <----------DOF2                            <---------ANAC46 >ICU4--------->HSFB2a(2)      <---------AtLEC2                 <---------ANAC58                    - -ATHB12            <---------ICU4                         <---------ANAC58                         - -YAB1<---------HSFB2a(2) <----------DOF2                  <---------ANAC58                         -   acatttttctataacttgatcatcttttcttttgtatgtccatatttttgttttttgttttccttggtgtgtttcacttttctgtacatagttgaatcac  87200           --------->ANAC58           --------->ANAC58           --------->ANAC46    --------->ANAC58                     --------------->AGL15    --------->ANAC46                     <---------------AGL15    ---------->DOF2    --------->ANAC58                    <-----------------AGL2   --------->YAB1 -------->ANAC58                        <-----------------AGL3  <---------ATHB12 -------->ANAC58                      <-----------GT1         --------->WOX13(1) -------->ANAC46              ---------->DOF2          ------>ZmHOX2a(1)     --------->ZAT6         -   acactcaagaaacaagctattttcaaacaagtgaaagaattatctatttatggactcctaaaatcaatgaaagcatataacacaaggagggataacatat  87300                                                       <---------TOE2(2)                          <--                                                       <---------TOE1(2)                          ---                                                    --------->ATHB12                --------->ANAC46                              <---------AHL20(1)    --------->YAB1               --------->ARR14(2)           --------->DAG2     <---------ARR11(3)   <---------ATHB12       <---------ARR11(3)   ------          ---------->DOF2     --------->AHL20(1) --------->WOX13(1)       --------->ARR11(3)   <----- ---------->GT1       <---------ATHB12--------->At4g35610                 <---------GLK1(2)    ------   acttgtaaattgaaaagtagacaaatcaacaatatatatcatctaaattagcaatcataggtttaagacataaaaagattttgtatatgccactgagaat  87400  Previous    Next  AGI:  At4g00210.1    Description:  LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31). Identical to LOB domain-containing protein 31 (LBD31) [Arabidopsis Thaliana] (GB:O81322); similar to LBD19 (LOB DOMAIN-CONTAINING PROTEIN 19) [Arabidopsis thaliana] (TAIR:AT2G45410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24487.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 85693    to: 86888    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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